Tachyglossus aculeatus (Australian echidna): 119930078
Help
Entry
119930078 CDS
T10703
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119930078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119930078
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119930078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
119930078
NCBI-ProteinID:
XP_038604456
LinkDB
All DBs
Position
6:complement(2428557..2471150)
Genome browser
AA seq
545 aa
AA seq
DB search
MATELEAAGPGANAAGRLEAEEDEEHWLYGDDTSGKLDHRLLSGHVDTSLPLHDAGRENR
GGGEDGDPAQHVAPSGGEDEDDDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKMGRGY
GAATSAKLQPKGIDLDALGNINGFPVVEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWK
AYCEKQRRLQLGLDPSPPISTENKITVQQGRTGNADKEPENIIIKTEFKTDFVALVGGRV
KAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGEHGSKPQPSPQPQP
QPAQPQQPPQQQPFVPPAAGPPPPPLAGPPPPHFLHPPPPSVPSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPSSYNNRQPPPFGYSSAAESGFISYPPISATHTPWVTT
LDKGSGVSGGGHWSRRERDRTPTTSEYNNDDERYRYYSRERSYDLDREYRRSRDRSRERE
ERHRERRHREKEEGSKHKSSRRKQHENDEGEGHRRHKHKKNKRSKEDKEASEDGVPEGGE
PDAKD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggaggcggccgggccgggggccaacgcggcggggcggctggaggcc
gaggaggacgaggagcattggctgtacggggatgacacgtccgggaagctggaccacaga
ctgctttctggacacgtggacacttctcttcctctacatgatgctgggcgggagaacaga
ggtggtggcgaggatggggacccggctcagcacgtggccccaagcggcggagaggacgag
gacgacgacagcgacagcgatgatgacgacgtcaaggtcaccatcggcaacatcaagacc
ggggccccttcctacatgggcacccccatgaacctaaacctgaaaatggggagaggctac
ggggcggcgacttcagccaaactgcagcccaaagggattgacctggacgcgctggggaac
atcaacgggtttccggtggtggaagtggatttggactcgtttgaagacaagccttggcgg
aaaccaggggctgacctttccgattactttaactacggattcaacgaggagacgtggaaa
gcatattgtgaaaaacagcggcggcttcagctgggcctggacccctctccgcccatcagc
acggagaacaaaatcacggtgcaacaaggccggaccggcaacgcggacaaggagcccgag
aacatcatcatcaaaaccgagttcaagacggactttgtggccctggttgggggccgagtg
aaggccgggccacccccaaaccgaaagttgggtgggacgatcgatgtgattggcggacag
gcgggtaccatccgccgtgtggagggccgccggcgggacaaacatgcctcggaggagaac
cccatccaggtcctcggagagcatgggagcaagccacagccttccccgcagccgcagccc
caaccagcccagccacagcagccccctcagcagcagcccttcgtccccccagcggcagga
cccccacccccacccctggctgggcccccgccgcctcacttcctccatcctccgcccccg
tcagttccgtccgtgccacccccgctgcaccccccgggtttgccgccccccggacccatc
ccaggcttgttcccaccacctctggctcctccgccggccctcctcatcccgacgctggat
ggccaaccctccagctacaataaccgccagccacccccctttggctacagctctgcagca
gaatctggcttcatcagctacccacccatctccgccacccatacgccatgggtgaccaca
ctggataagggttctggtgtctctggaggtggccattggtcgcggagagagagggaccgg
actcccacgaccagcgaatacaacaatgatgatgagcgctatcgctactacagccgggag
aggagttacgacctcgaccgggaataccgccggagccgggatcggagccgagaacgggaa
gagcgccaccgggagcgccggcaccgggagaaggaagagggcagcaaacacaagtcttca
cggcggaagcagcacgagaacgacgaaggggagggccaccggcgccacaaacacaaaaag
aataagcgcagcaaagaggacaaagaggccagcgaagatggcgtccccgagggcggcgag
ccggatgccaaagattaa
DBGET
integrated database retrieval system
