Tachyglossus aculeatus (Australian echidna): 119930626
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Entry
119930626 CDS
T10703
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04151
PI3K-Akt signaling pathway
tacu04382
Cornified envelope formation
tacu04510
Focal adhesion
tacu04512
ECM-receptor interaction
tacu04518
Integrin signaling
tacu04820
Cytoskeleton in muscle cells
tacu04926
Relaxin signaling pathway
tacu04933
AGE-RAGE signaling pathway in diabetic complications
tacu04974
Protein digestion and absorption
tacu05146
Amoebiasis
tacu05165
Human papillomavirus infection
tacu05200
Pathways in cancer
tacu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119930626 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119930626 (COL4A4)
04518 Integrin signaling
119930626 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119930626 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119930626 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
119930626 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
119930626 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
119930626 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119930626 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
119930626 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119930626 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
119930626 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
119930626 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tacu04147
]
119930626 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119930626 (COL4A4)
Exosome [BR:
tacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119930626 (COL4A4)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119930626 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119930626
NCBI-ProteinID:
XP_038605089
LinkDB
All DBs
Position
7:33284041..33407611
Genome browser
AA seq
1680 aa
AA seq
DB search
MALLRCYYRGIKTISKPWWLIIIFSLHVYGGGKKYTAICGGRNCSVCQCFPEKGSRGQPG
ELGPQGPIGPCGVPGPPGLPGEKGMRGDDGFAGAAGERGDKGPTGVPGFPGLDGVPGYPG
PPGSRGKPGLDGQNGSRGDPGIPGQHGYPGPIGPAGLPGQKGEKGTSAYIAVKGPPGDQG
IPGPPGSPGPKGPRGAKGGMGVPGKPGADGPQGLPGMPGVQGNPGVGIKGQTGDPGEVGH
QGPPGPPLLVGPPSSRLHKGEKGTKGMPGKSGLPGPVGAKGEPGSGVKGEKGIPGFPGLR
GHSGSYGSPGSPGLKGEPGEVGIPGKFGFPGIKGDPGDRGEPGPPGIMVTPPVPLKGLPG
DPGVPGRYGEMGSVGKVGPPGPSGKPGEDRAVGVTGPMGSQGAPGVPGPPGEVGVPGKAD
APQGKPGNPGYPGIPGARGEQGLPGPDVVFCTAGPPGPQGMKGKAGPPGRSGVKGEKGNE
GACACTPCVTGLPGTPGLPGRKGRKGELGFPGRLGEKGDKGSPGAKGYPGPSGIPGTLGM
SGPKGEKGDRVIPRIKGRKGERGSQGLPGFPGLQGQPGQDGIEGPVGLPGLPGDRGGAVP
GAKGFPGHQGAPGKTGPRGPSGLGFPGRQGMRGIPGDRGTVGDRGPPGAKGQKGDTFPCA
SDFPGNPGPPGFQGPPGPKGIQGPPGPAGPHGFDGAKGQRGKPGISKLPGPAGFPGDNGD
PGFEGEKGSSPDGPQGFPGSPGINGQKGMPGDPAYGHPGLPGIKGSAGFPGPKGLRGDPG
YPGSPGEAGTPGLPGTKGFKGQKGHNGPPGSPGPPGHLCEKGSPGLPGQPGLPGPQGNPG
YPGLKGQQGDVGPPGPAGMKGLPGAPGLNGSSGPPGPPGNRGHLGDDGLPGFQGPKGAQG
LPGIPGFPGEQGKKGQAGHPGRKGERGGDGHPGHPGDKGDWGPKGEKGLPGDEGSISVIS
RKGEKGELGPPGEFGVPGERGDKGSSGLQGEEGLTGRDGLPGFQKGHPGPSGQPGFPGPP
GFPGSPGSRGVFGFPGLPGDPGADGSQGIPGPSGPIGVKGPKGKRGDSTSLFGPMGEKGR
PGNPGFAGNFGPPGDLGLPGTPGDPGTPGMPGPPGYPGQPGFPGTQGTPGQRGIPGEIGD
PGIPGPVGDQGLAGLRGMKGFSGIPGLNGLHGLKGPKGAKGSPGFIGRGPPGFAGLPGAK
GEKGEPGRAGLSFPGPFGERGPQGPPGRPGLQGSGGPKGRTPEGEISYPGPQGDIGFPGP
DGIQGPPGSPGQPGGVDFWKGSPGDDGLPGPPGPSGPPGPPGPKGIPGCEGRDGQKGLMG
HPGLQGPPGCPGPHGDKGSPGPPGTPGSPGPTGDPGLPGDIADCPKIPGPPGIPGSRGPE
GRMGFPGPRGPPGLPGLKGEPGPDGQRGQDGFAGSPGAPGQKGDSGEPGCDGPPGPPGPT
GDPGSRGPRTEYLNGFLLVLHSQTDRVPSCPDGLPKLWTGYSLLYIEGQEKAHNQDLGLA
GSCLPMFSTMPFAYCNINHVCFYARRNDKSFWLSSSAPLPMMPLSEDKIQPYISRCVVCE
SPARAVAVHSQDESIPPCPVSWRSLWIGYSFLMHTGAGDQGGGQSLVSPGSCLEDFRAAP
FIECQGRQGTCHFFANEYSFWLTTVKPELQFSPAPSPSTLKDGQAQRQKISRCQVCMKYG
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggctttactaagatgttattacagagggattaaaactatctccaagccctggtggctc
ataattattttttctctacatgtttatgggggcgggaagaaatacactgctatttgtgga
ggacgaaattgttcagtttgccaatgctttcctgagaaaggatcacggggccagccagga
gagcttggaccacagggtcctatcggaccatgcggagttccaggaccccctgggttgcca
ggagagaaaggaatgagaggggatgatggatttgcgggagcagctggagaaaggggagat
aagggcccaacaggagttcctggctttccaggtttggatggtgtgcctggctacccagga
cctcccggatcaagaggtaaaccgggtttagatggccaaaatggttcaagaggagatcca
ggcattcctggacagcatggatacccagggccaattggcccagctggtctacctgggcaa
aaaggagagaaaggaacctcagcatacattgcagtgaaaggcccacctggagatcaaggt
atcccaggacctcctggctcacctggaccaaagggcccaaggggagcaaagggcggtatg
ggggttccgggtaaaccaggtgcagatggtcctcaaggccttcctggaatgccaggtgtg
cagggcaatccaggagttggcattaaaggacaaactggagatccaggcgaagttggacat
caagggcctccagggccacccctattggttgggcctccaagttcacgtctccacaaagga
gaaaaaggcacaaaagggatgcctggaaaaagtggcctccctggcccagttggagctaag
ggtgaacctggaagtggagtgaagggagagaaaggtattcctggatttcctggtcttcgg
ggtcattctggttcctatggatccccaggctctccaggattaaagggggaacctggagaa
gttggcattcctgggaagtttggatttccaggcataaagggagatcctggagaccggggg
gaaccagggccaccaggtattatggtaactccacctgttccactgaaaggacttccagga
gatccgggagttccaggtcgctatggagaaatgggatcagttggaaaggttggcccacct
ggtccctcaggtaaaccaggtgaagaccgggcagtaggagtgacagggccaatgggatcc
caaggagcaccgggggttccaggtcccccaggggaagttggtgtccctggaaaagcagat
gccccacagggaaagcccgggaatccaggatacccaggcataccaggagcacgaggagag
cagggtctgcctggaccagacgttgtgttctgtactgctgggcctcctggacctcaagga
atgaaaggaaaagcaggacctccaggaagaagcggtgtgaaaggtgaaaaaggaaatgaa
ggtgcctgtgcctgtaccccctgtgtcactggcctaccagggactccagggctccctgga
agaaaaggaaggaaaggagagctgggatttcctgggagacttggagaaaaaggtgacaaa
ggctctcccggggcaaaaggatatccaggaccatctggcatacctggtaccttgggaatg
tctgggccaaaaggagaaaagggagacagagttatccccagaataaaaggaagaaaagga
gaaagaggctcccaaggactgcctggatttccaggacttcaaggacaaccagggcaggat
ggaattgaaggaccagtaggattacctggattgccaggggatcgaggaggagcagttcca
ggtgctaagggatttcctggacaccaaggagcccctgggaagactggacctaggggtcct
tcgggtttggggtttcctggacgacagggcatgagaggcatcccaggagaccgaggcact
gttggtgacaggggaccacctggtgcaaagggccagaaaggtgacacatttccttgtgcc
tcagattttcctggaaatccaggcccaccaggatttcaaggtcctccaggcccaaaggga
attcaaggacccccaggtccagctggaccccatggttttgacggggccaaaggccaaaga
ggcaagccaggaatttccaaactgccaggaccagccggctttcctggtgacaatggagat
ccaggttttgaaggtgaaaaaggatcctcaccagatggtcctcagggttttcccggctca
cctggtatcaatgggcaaaaaggtatgccaggtgatcctgcttatggccacccaggactt
ccaggaattaaaggttctgcaggatttcccgggcctaaaggacttagaggtgacccggga
tatcctggatctccaggagaggctggtaccccaggacttccaggaaccaaaggatttaaa
ggccaaaaagggcataatggacctccgggttctccaggtccacctggacacttatgtgag
aaaggctcacctgggttgccaggacaaccagggctccctgggccacaaggtaatccaggt
taccctggcttgaaaggccagcaaggagatgtgggtccccctggaccagctggaatgaag
ggtcttccaggagccccaggattgaatggatcatctggtcccccaggaccaccaggaaat
cgagggcatttgggggatgacgggttacctggatttcagggcccaaagggtgcccaagga
ctgccaggtatcccaggctttccaggcgagcaagggaagaaagggcaagcaggacaccct
gggagaaagggtgaacggggaggagatggtcatcctggccacccaggagacaaaggggac
tggggacctaaaggtgaaaaaggacttcctggagatgaaggtagtatttctgtgatttcc
agaaagggagaaaaaggagaattaggtccgcctggagaatttggagtcccaggagaaaga
ggcgataaagggtcttctggactccaaggggaagaaggattaacaggaagagatggactt
ccaggatttcagaaaggtcatcctggtccaagtggccagcctggatttccaggaccacct
ggcttcccaggctctccgggctcaagaggagtatttggtttccctggactaccaggtgat
ccgggagctgatggttcacagggcatacctggaccttcaggacctattggagtcaaaggc
cctaaagggaaacgaggggattcaaccagtttatttggcccaatgggagaaaaaggaaga
cctggaaaccctggatttgcaggtaattttggacccccaggagacctgggtttgcctggg
accccaggggatcctggaaccccaggaatgccaggaccaccaggatacccaggacaacct
ggctttccaggtactcaggggacccctggacaaagaggaattccaggagaaataggcgat
cctgggatcccaggacccgttggagatcaaggactggctgggctccgaggcatgaaaggg
ttctcaggaattccaggattaaatggtttgcatggactcaaggggccaaaaggagcgaaa
ggttcaccaggtttcatcggaagaggaccaccaggttttgctggattgcctggcgcaaaa
ggggaaaagggagaaccaggaagggctggactttcttttccaggtccttttggtgaaaga
ggacctcaaggtcccccagggaggcctggacttcagggatctggaggtcctaaaggaaga
acacctgaaggtgaaatttcttatcctggtcctcaaggagatataggctttcctggccct
gatggtatacaaggtccaccagggtctccaggtcaacctggaggtgttgacttttggaaa
gggagtccaggtgatgatggcttgccaggaccaccaggaccctctggcccaccaggacct
cctggaccaaaaggcatcccaggatgtgaaggaagagatggccaaaaagggctaatggga
catcctggtcttcaaggtccacctggatgtcctgggccacatggagataaagggagtcct
ggacccccggggactcctgggtcacctggtcccacaggggatcctggcctacctggagat
attgcagattgtcccaaaatccccgggcccccagggattccaggttcaagaggaccagaa
ggacgcatgggatttcctggtccaagaggacccccaggcttaccaggacttaaaggtgaa
ccagggccggatggccagagaggtcaagatggctttgctggatccccgggagcacctgga
caaaagggagactcaggtgaaccaggctgtgatgggccaccaggtccccctggcccaact
ggcgatccaggatccagagggccgagaactgaataccttaacggattccttctggttctc
catagtcagacagacagagtaccttcatgtcctgatggattgcccaagttgtggactggg
tacagtctgctttatatagaaggccaggagaaagcacataatcaagatctgggtctcgcg
ggatcttgtcttcccatgttcagcacgatgccgtttgcttactgcaacatcaatcacgtc
tgtttctatgccaggagaaacgataaatccttttggctatcaagttctgctcctctgccc
atgatgcccctctctgaagataaaatacagccgtacattagccggtgtgtggtgtgcgaa
tccccggcccgggccgtggccgttcacagccaagatgaatccatcccaccatgtccggta
tcgtggagaagcctctggataggttattctttcctaatgcacacaggagctggagatcaa
ggaggaggacagtccctcgtgtcccctggaagctgccttgaagacttccgagcagccccc
ttcattgaatgccaagggcggcagggaacgtgtcatttttttgccaatgaatacagcttc
tggctaacgacagtgaaaccagaattacagttttcaccagctccctcaccaagcacctta
aaagatggacaggcacagcgccaaaaaatcagcagatgtcaggtctgcatgaaatacggt
taa
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