Tachyglossus aculeatus (Australian echidna): 119932300
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Entry
119932300 CDS
T10703
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04622
RIG-I-like receptor signaling pathway
tacu05161
Hepatitis B
tacu05162
Measles
tacu05164
Influenza A
tacu05168
Herpes simplex virus 1 infection
tacu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119932300 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
119932300 (IFIH1)
05171 Coronavirus disease - COVID-19
119932300 (IFIH1)
05164 Influenza A
119932300 (IFIH1)
05162 Measles
119932300 (IFIH1)
05168 Herpes simplex virus 1 infection
119932300 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tacu04054
]
119932300 (IFIH1)
Enzymes [BR:
tacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119932300 (IFIH1)
Pattern recognition receptors [BR:
tacu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
119932300 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
DEAD
ResIII
Helicase_C
CARD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
119932300
NCBI-ProteinID:
XP_038607336
LinkDB
All DBs
Position
9:complement(49381790..49430640)
Genome browser
AA seq
1008 aa
AA seq
DB search
MARDCSPEEAFRHLLACFRPRLKACIEVNGVLDYLTFLSDEAKAEIKRVARTRGGPRAVD
RLLSTLETGQWPPGYQREFVTALREAGCPLAARYVDPDGGHLPTPAEEAAHDTHGQLVTL
LLPSLVRTLQPDQVLDRCLEKGLLTGEDRAEVCQAIRNHGNPSGTRELLNRIVLKEDWFS
LFVTILRETEHEELVESLTGKNGFESSEEAEIKENGIEQPEAEDRVTTGFTLTSFSEQLK
SESTNQLNEIDALDSSFSESLASASDTSLAEGSISCLDESLGHNDTMGSDSDPESVKERG
SPEPELTLRSYQMEVAKLALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVI
VLVNKVPLVEQHFRKEFEPFLKRWYRVIRLSGDSQLKISFPEVVRSHDVIISTAQILENS
LLNSGEDESVQLSDFSLIIIDECHHTQKEGVYNNIMTRYLTQKMKNKKLMKENQPVVPQP
QILGLTASPGVGKAKKQAKAEEHILRICANLDAFTIKTVKENDALLKSQVKDPCKKIVIA
DDTRYDPFKKKLIDIMADIQNYCRLYPTSDLGGQQYEQWVVQMEKKAAKEENRTERVCAE
HLRKYNEALQINDTIRMIDAYNHLKNFYKDEKAKKMAAQEEDDDGQAALILNKTDKYLID
LFYENKEKLKQLALDPDHENEKLTKLRNTIIEEFTKADEAAARGIIFTKTRQSACALSQW
IAENDKFAEIGVKAYYLIGAGHNSEFKPMTQNEQREVINKFRTGKLNLLIATTVAEEGLD
IKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAQSGSGVIERESVNVYREKMMYKA
INRVQNMTPQDYSQKILEFQMQSIMEKKMKIKKNLTKQIRENPALITLSCRNCSKQACTG
EDIQVIENMHHVNMTPEFKQLYTTRSNKVLQQKLADYQINGEIICKCGQSWGTMMVHKSL
DFPCLNIKHFVVTFTNNSEKKIYKRWSELPITFPKLNYSDYCMFSDED
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggactgttccccggaggaggcgttccgccacctgctcgcctgcttcaggccg
cggctgaaggcctgcatcgaggtgaacggcgtgctggattacctgaccttcctgagcgac
gaggcgaaggccgagatcaagcgggtcgcccgcacccgcggggggccgcgggccgtggac
cggctgctgagcaccctggagacgggccagtggcccccgggctaccagagggagttcgtc
acggccctgcgggaggccggctgcccgctggccgcccgctacgtcgaccccgacggcggc
cacctgcccaccccggccgaggaggccgcccacgacacccacggccagctggtcaccctc
ctcctgccctcgctggtgcggaccctccagcccgaccaggtgctggacaggtgcctggag
aaggggctcctcaccggcgaagaccgagctgaggtgtgtcaggcaatcaggaatcatgga
aatccatctggtacaagggaattgctgaataggatagtgctgaaggaagattggttttct
ctgtttgtgacaattctgcgagaaaccgagcatgaagagcttgtggagagcttaacgggc
aaaaatggctttgaaagcagtgaagaagcagagattaaagaaaatgggatagaacaacca
gaggcagaggacagagtcaccactggattcacccttacttccttctcagagcagttgaag
tcggaaagtactaatcagctcaatgagattgatgcgctggactcatctttttcagaatcc
ttggcttcagcatcggacacaagtttggcagaagggagtatcagctgcctagatgaaagc
cttggacataatgacaccatgggcagtgattcagacccagagagtgtaaaggagagagga
tcgcctgagccggagctaacgctcaggtcttaccagatggaagtggctaagctagcgctg
gaagggaagaacattatcatctgcctccctacaggcagtgggaaaaccagggtggccgtt
tatattgccaaagatcacttggataaaaagaagaaagcatcagagcctggaaaagttata
gttcttgtgaataaggtcccactcgtggaacaacacttccgtaaagagttcgagccattc
ttgaaaagatggtatcgcgtcatcaggttaagtggggattctcagctgaaaatctccttt
ccagaagtggtcagatctcatgatgtcatcatcagtacagctcagatcctggagaattcc
cttctgaactcaggggaagatgaaagtgtccaattatcagatttttccctcatcatcatt
gatgaatgtcatcacacccaaaaagaaggtgtctacaacaatataatgacccgctatttg
acacaaaagatgaaaaataagaagctgatgaaagaaaatcaacctgtggttcctcagcct
caaatcctaggactgacagcctcgcccggggtgggaaaggcaaagaagcaagcaaaagct
gaagagcatattttaagaatatgtgccaaccttgatgcatttacaattaagacagttaag
gaaaatgatgcccttttaaaatctcaggtgaaggatccgtgcaagaagatagtgattgca
gatgacaccagatatgatccttttaaaaagaagcttattgatattatggcagatattcaa
aactattgccgactttatccaacatctgatcttggcggccagcaatacgaacaatgggtc
gttcagatggaaaaaaaagctgcaaaagaagaaaaccgtacagagcgtgtatgtgcagag
catttgagaaagtacaatgaggccctgcaaattaacgacaccatccgaatgattgatgcg
tacaaccatcttaaaaacttctataaggatgaaaaagcaaagaaaatggcagcacaagag
gaagatgatgatggacaggctgctctaattctgaataagacagataaatatctcatagat
ttattttatgaaaacaaagaaaagctgaagcagttggccttagatccagatcatgaaaat
gaaaaactgaccaagttaagaaacaccataattgaagaatttactaaggccgatgaagcg
gcagcccgaggaatcatttttaccaagactcggcaaagtgcttgtgccctctctcagtgg
atcgctgaaaatgacaaatttgcagaaataggagtgaaagcttactatctcattggtgct
ggccacaacagtgaatttaaacccatgacccagaatgaacaaagagaagtcattaataag
ttccgtactggaaagttaaatctcctcattgcaaccacagtggctgaagaaggtctggat
ataaaagaatgtaatattgttatccgctacggtctcgttaccaatgaaatagcaatggtc
caggcccgaggacgagctcgtgctgatgagagcacatacgtactggtggcgcaaagtggg
tcaggagtcattgaacgtgaaagtgttaatgtttaccgggaaaaaatgatgtataaagcc
atcaaccgtgttcagaacatgacgcctcaggattattctcagaagattttggagttccag
atgcaaagtataatggaaaagaaaatgaaaatcaagaaaaatctaaccaagcaaatcagg
gaaaacccagcgttgataactttgagctgcagaaactgtagtaaacaagcctgtactgga
gaggacattcaagttattgaaaatatgcaccacgttaatatgactccagagtttaagcaa
ctttacactacaagaagtaacaaagtactgcaacagaaacttgcagattatcaaataaat
ggtgaaattatctgcaaatgtggtcagtcctggggaacaatgatggtgcacaaaagttta
gatttcccttgtctcaatatcaaacattttgtggtgactttcacaaataattctgaaaag
aagatatataaacgatggagtgaactacctatcacattcccgaagcttaactattcagat
tattgtatgtttagtgatgaagattaa
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