Tachyglossus aculeatus (Australian echidna): 119932419
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Entry
119932419 CDS
T10703
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu01524
Platinum drug resistance
tacu03430
Mismatch repair
tacu05200
Pathways in cancer
tacu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119932419 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119932419 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
119932419 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119932419 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119932419 (MSH6)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119932419 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
119932419
NCBI-ProteinID:
XP_038607513
LinkDB
All DBs
Position
9:2341653..2357419
Genome browser
AA seq
1358 aa
AA seq
DB search
MSRQSSLLSFFSKAPKAQPRTQAPVPAPVPGRASSPRPKAGGRRARALPPAAAAATDPGP
QRRGRGGHRDPKDPKNPHSNACDFSPGDLVWAKMEGYPWWPCLVYDHPTDGTFLRGEGKA
LRVHVQFLDDRPTRGWVSKRLLKPYTGSSCKEAQKGGVFFSAKPEIQRGMRLADDALGKD
KSERLSLAVCDEPSEAEEEEEEDEEEEDEEEAEASGASAPENNGERESEEEEVRPRRQRV
TRGAAGRPKKRRVVSDSESDHGSSDADFQPDGGEAASSDDDDEASSGVDESDGEASSSEP
DADGPAKAAAPKRKRASAGKGRDGGGEPPRPPGRAAEVASETREALKAFCAGPQGAEPPA
AGAGGDGPAPWYHETLPWLQEGRRRDGRRRRPEDPAYDATTLYVPEDFLNTCTPGMRRWW
QLKGDNFDLVIFYKVGKFYELYHMDAVTGVTELGLVFMKGGWAHSGFPEISFGRYSDVLV
QKGYKVARVEQTETPEMMEARCRRAGHVSKFDRVVRREICRVITKGTQTYGVLDGSPAET
HNRYLLSVREQDGAAAAAAGGSPRAFGVCFVDTSVGKFHVGQFGDDRHCSRFRTLVAHHA
PVQVLFEKGNLSAESRRVLKGSLASALQEGLAPGSQFWDAAKTLKTLLEEGYFEGAPPPP
ALRALTAGTDPLGLTPAEGGELALSALGACVFYLKKCLIDQELLSMADFEAFVPVDQAAG
PGPARPDGRAVLDAVTLSNLEVLRNGTDGSGEGSLLQRLDSCRTPFGRRLLKRWLCAPLR
HPAAIEDRLAAVADLAAVPDRAAEAGDLLRRLPDLERLLSKIHSIGSPLKSRSHPDGRAV
MYEETTYGKKKIVDFLSALEGFKVAAEAAGALGAAAGGFRSETLRRAVAVRTADPGGRFP
DLTAELRRWDAAFDHQKARRTGVITPKEGFDPDYDRAGAAIRAAEDGLGRYLEEQRRLLG
CQAVVYWGGGKNRYQLEVPEGLAARDLPGDYELKSTKKGVKRYWTKAIEKRLAELTAAEE
RRDAALKDCMRRLFHNFDLNHRDWQAAVECCAVLDVLLCLANYSRGGDGPMCRPVIVPPG
DGVPPVLELRGSRHPCISKTFFGDDFIPNDIVIGCEDEAGAGGGEALCVLVTGPNMGGKS
TLMRQAGLLVILAQLGCYVPAESCRLTPVDRIFTRLGASDRIMSGESTFFVELSETASVL
QHATAHSLVLVDELGRGTATFDGTAIAHAVVKELAENIRCRTLFSTHYHSLVEDYSHSRA
VRLGHMACMVENECEDPSQETITFLYKFVPGACPKSYGFNAARLAHIPEEVIRRGHRKAR
EFEGLTEALRLFREVCLIAENSADTRTLRALLRPGEEP
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcagagctccctcctcagcttcttctccaaggcccccaaggcgcagcctcga
acccaggccccggtcccggccccggtcccgggccgggcctcctccccgaggcccaaggcc
ggggggcgccgggctcgggccctcccccccgccgccgccgccgccacggaccccgggccc
caacggcggggccgcgggggccacagggaccccaaggaccccaagaatccccacagcaac
gcttgcgacttctctccgggggacctggtgtgggccaagatggagggctacccttggtgg
ccctgcctggtgtacgaccaccccaccgacgggaccttcctccgaggggagggcaaagcc
ctccgggtccacgtgcagttcttggacgacaggcccaccaggggctgggtcagcaagagg
ctgctgaagccctatacgggttcctcgtgtaaggaagcccagaagggaggggtgttcttc
agcgcaaagcccgagatccaaagggggatgaggctggccgacgacgccctcgggaaggac
aagagcgagcggctttcgctggccgtatgcgacgaaccctctgaggctgaggaggaggaa
gaggaggacgaggaagaggaggacgaggaggaggcagaggcgagcggggcctcggctccc
gagaacaacggagagcgggagagcgaagaggaggaagtgaggccgcggaggcagcgggtc
acgcggggcgccgccggccggcccaagaagcgccgggtggtgtccgactcggagagcgac
cacgggagctcggacgcggacttccagccggacggcggggaggcggccagcagcgacgac
gacgacgaggccagcagcggggtggacgagagcgacggcgaggcctcctcctccgagccg
gacgccgacggccccgccaaggcggccgcgcccaagcgcaagcgggcgtccgcgggcaag
gggcgggacggcgggggcgagccgccccggccccccgggcgggccgccgaggtggcctcc
gagacgagggaggctctgaaggccttctgcgccggcccgcagggcgccgagcccccggcc
gccggcgcgggcggcgacggcccggccccctggtaccacgagaccctcccgtggctccag
gaggggcggcggcgggacggccggcggcggcggccggaggaccccgcctacgacgcgacc
accctgtacgtgcccgaggacttcctgaacacctgcacgccgggcatgcggcgctggtgg
cagctgaaaggcgacaacttcgacctggtcatcttctacaaggtgggcaagttctacgag
ctgtaccacatggacgctgtcaccggggtcacggagctggggctggtcttcatgaagggc
ggctgggcccactcgggcttccccgagatctccttcggccgctactccgacgtcctggtg
cagaagggctacaaggtggcgcgcgtggagcagacggagacccccgagatgatggaggcc
cgctgccggcgggccggccacgtgtccaagttcgaccgggtggtccggcgggagatctgc
agggtcatcaccaaggggacgcagacctacggcgtgctggacggcagccccgccgagacc
cacaaccgctacctgctgagcgtccgcgagcaggacggggcggcggcggcggcggcgggg
ggctccccgcgggccttcggggtctgcttcgtcgacacctcggtgggcaagttccacgtg
ggccagttcggagacgaccggcactgctcgcgcttccggaccctggtggcccaccacgcc
cccgtgcaggtcctcttcgagaagggcaacctgtcggccgagagccggcgcgtcctgaag
ggctccctggcctccgccctgcaggagggcctggccccgggctcccagttctgggacgcg
gccaagaccctgaagacgctcctggaggagggctacttcgagggggccccgccgcccccg
gccctccgcgccctgacggccgggaccgaccccctggggctgacgccggccgagggcggc
gagctggccctgtccgccctgggcgcctgcgtcttctacctcaagaagtgtctcatcgac
caggagctgctgtccatggccgacttcgaggcgttcgtgcccgtggaccaggccgcgggg
ccggggccggcccggcccgacgggcgggcggtgctggacgccgtgacgctgagcaacctg
gaggtcctccggaacggcacggacgggtcgggcgaggggagcctcctgcagcggctggac
tcgtgccgcacgcccttcggccggcgcctcctgaagcgctggctgtgcgccccgctccgc
cacccggccgccatcgaggaccgcctggccgccgtggccgacctggccgccgtgcccgac
cgggccgccgaggccggcgacctgctccgccggctcccggacctggagcggctgctcagc
aagatccacagcatcggctcgccgctcaagagccggagccacccggacgggcgggccgtc
atgtacgaggagaccacctacggcaagaagaagatcgtcgacttcctgtcggccctggag
ggcttcaaggtggcggccgaggccgccggggccctgggggcggcggccggcggcttccgc
tcggagaccctgcgccgggcggtggcggtgcggaccgccgaccccgggggccgcttcccc
gacctgacggcggagctgaggcgctgggacgccgccttcgaccaccagaaggcccgccgg
accggggtcatcacccccaaggagggcttcgacccggactacgaccgggccggggccgcc
atccgggccgccgaggacggcctcggccgctacctggaggagcagcgccggctcctgggc
tgccaggccgtggtctactgggggggcggcaagaaccgctaccagctggaggtgcccgag
ggcctggccgcccgcgacctgcccggggactacgagctcaagtccaccaagaagggcgtc
aagcgctactggaccaaggccatcgagaagcggctggccgagctgacggccgccgaggag
cggcgggacgcggccctcaaggactgcatgcgccgcctcttccacaacttcgacctcaac
caccgagactggcaggccgccgtcgagtgctgcgccgtgctggacgtcctgctctgcctg
gccaactacagccggggcggggacggtcccatgtgccggcccgtcatcgtccctcccggg
gacggcgtccccccggtcctggagctgagagggtcccgccacccctgcatctccaagacc
ttcttcggggacgacttcatcccgaacgacatcgtgatcggctgcgaggacgaggcgggc
gccggcggcggggaggccctgtgcgtgctggtcacgggccccaacatgggcggcaagtcc
accctcatgagacaggcgggcctcctggtcatcctggcccagctgggctgctacgtcccc
gccgagtcctgcaggctcactcccgttgaccggatcttcaccaggctgggcgcctccgac
cgtatcatgtccggtgaaagcacgttcttcgtcgagctgagcgagacggccagcgtcctg
cagcacgccaccgcccactccctcgtgctggtggacgagctcgggagaggcaccgcgacc
ttcgacggcacggccatagcgcacgccgtggtgaaggagctggcggaaaacatcaggtgc
cgcactctgttttccacgcactaccactcgctggtggaggattattcccacagccgggca
gtgcggctgggacacatggcctgcatggtggaaaacgaatgcgaagacccgagccaggaa
accatcaccttcctgtacaagttcgtgccgggggcctgccccaaaagctacggcttcaac
gccgcgcggctggcccacatccccgaggaggtcatccgcaggggccaccgcaaggccagg
gagttcgaggggctgaccgaggctctgcgtctgttccgggaggtctgtctgatcgccgag
aactcagcggacacccgcaccctccgcgcgctgctgaggccgggcgaggagccgtga
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