Tachyglossus aculeatus (Australian echidna): 119932463
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Entry
119932463 CDS
T10703
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu01524
Platinum drug resistance
tacu03430
Mismatch repair
tacu05200
Pathways in cancer
tacu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119932463 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119932463 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
119932463 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
119932463 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119932463 (MSH2)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119932463 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
119932463
NCBI-ProteinID:
XP_038607599
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All DBs
Position
9:2275453..2338149
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AA seq
943 aa
AA seq
DB search
MSVQPKASLGLDGPAELGFVRFYLALPAKPQTTVRLFDRGDYYTAHAHDALLAAAHVFKT
QAVVKMLGAPGAQRLESVVLSKMNFEAFVRDLLLVLHYRVEVFKNKTGRGAKDNDWHVAY
KASPGNLSQFEEVLFGNSDSSTSIGVVGVKLSTADGQRCVGVGYVDSTHRRLGLCEFADN
DQFSNLEALLVQLGPKECLLPAGDTAGDMGKLRQVVQRGGILSSDRKKAEFATKDVVQDL
NRLLKAKKGEAVNSAALPEMENQVAAASLSAVIKYLELLSDDSNFGQFELMTFDLSQYMK
LDNAAVRALNLFQGSAEDTSGSQSLAALLNRCKTPQGQRLVNQWIKQPLLDKNRIEERLN
LVEAFVDDGELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQTINQLPGVIQAL
EKYEGAHQMLLLAIFATPLNDLRSDFSKFQEMIETTLDMNQVENHEFLVKASFDPNLTEL
RATMDGLEEKMQSALATAARELGLEAGKSIKLESNAQMGFYFRVTCKEEKSLRNNKKFNT
LDIQKNGVKFTDSGLSSLNEEYTKSREEYEEAQNAIVKEIVNISSGYVEPMQALNDVLAQ
LDAAVSFAHVATSAPVPYVRPVVLERGRGRLALRGCRHACVEVQDEVAFIPNDVLFEKGG
HTFHIVTGPNMGGKSTYIRQTGVVVLMAQMGCFVPCEAAEVAIVDRILARVGAGDSQLKG
VSTFMAEMLETASILRSASQDSLIIIDELGRGTSTYDGFGLAWAISEHIATRVGAFCLFA
THFHELTALADQLPAVNNLHVTALTSNDTLTMLYRVRPGVCDQSFGIHVAELANFPKHVI
ESAKEKALELEEFQNVGKPRESDESEPAAKRCYREREQGEKIIQDLLSEVRALPFPEMSE
EDVRAKLKQLKAQVVAQNNGFVNEIIARVKVSAENRLPGARAL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcagccgaaggcgtccctgggcctggacgggccggccgagctgggcttcgtg
cgcttctacctggccctgcccgccaagccccagaccaccgtgcgcctcttcgaccggggc
gactactacaccgcccacgcccacgacgccctgctggccgccgcccacgtcttcaagacc
caggccgtcgtcaagatgctcggcgcccccggcgcccagcggctggaaagcgtggtgctc
agcaagatgaacttcgaggccttcgtgcgagacctgctgttggtgttgcactaccgcgtc
gaagtcttcaagaacaagacggggagaggcgccaaggacaacgactggcacgtggcttac
aaggcatccccgggcaacctctcccagttcgaggaggtgctcttcggcaacagcgactcg
tccacgtccatcggcgtggtgggcgtcaagctgtccacggccgacgggcagcggtgcgtt
ggcgtcggctacgtggactcgacccaccggaggctgggcctgtgcgagttcgccgacaac
gaccagttctccaacctggaagcgctgctcgtgcagctcggacccaaggagtgcctgctc
ccggccggggacacggcgggggacatggggaaactgaggcaggtcgtccagcgcggggga
atcctgagctccgaccggaagaaggcggaattcgcgaccaaggacgtcgtgcaggatttg
aaccgcctgctcaaggccaagaagggggaggcggtaaacagtgccgccttgccggagatg
gagaaccaggtcgccgccgcctccttgtcggctgtaatcaagtatctcgaactcctgtcg
gatgactccaatttcggacagttcgaactgatgacttttgacctcagccagtacatgaag
ctggataacgcggccgtccgagccctgaatctctttcagggttcagcggaagacaccagc
gggtctcagtctttagccgccttgctcaatcgctgcaaaacccctcaaggacagagactg
gtgaatcagtggatcaagcaaccgcttctggataaaaacagaatcgaggagaggctgaat
ctggtggaggcttttgtcgacgacggggaactgaggcagacgctccaggaagacctcctc
cgccgcttcccggacctcaatcggctggccaaaaagttccagaggcaagcggccaacctg
caggattgctaccggatctatcagaccatcaaccagttgcctggcgtcatccaggccctg
gaaaagtatgaaggggcacaccagatgctgctgctggccatcttcgccactccgctcaac
gacctccgctccgatttctccaagtttcaggaaatgatcgagacgacgctcgacatgaac
caggtggagaaccacgaattcctcgtcaaggcctcctttgatccgaacctgacggagctg
cgggcgacgatggacgggttggaggagaagatgcagtccgctctcgccacggccgcccgc
gagctggggttggaagcaggaaaaagcattaagctggagtccaacgcgcagatgggattt
tacttccgggtgacctgcaaggaagaaaaatccctccggaacaataagaagtttaacacg
ctggacatccagaagaacggcgtcaaattcaccgacagcggactgagctccttgaacgaa
gagtacaccaaaagcagagaagagtacgaagaagcccagaatgccattgttaaagaaatc
gtcaacatttcttcaggctacgtggagcccatgcaggccctgaacgacgtcctggcccag
ctggacgcggcggtgagcttcgcccacgtggccaccagcgctcccgtcccctacgtgcgc
cccgtcgtcctggagcggggccgcgggcggctggcgctgcgcggctgccggcacgcctgc
gtcgaggtccaggacgaggtggccttcatccccaacgacgtgctcttcgagaagggcggc
cacacgttccacatcgtgacaggccccaacatggggggcaagtcgacgtacatccggcag
acgggcgtggtggtcctcatggcccagatgggctgcttcgtcccctgcgaggccgcggag
gtggccatcgtcgaccgcatcctggcccgcgtcggggccggcgacagtcagctcaagggc
gtctcgaccttcatggcggagatgttggagacggcctccatcctcaggtcggcctcccag
gactccctgatcatcatcgacgagctggggcggggcacgtccacctacgacgggttcggg
ctggcctgggccatctccgagcacatcgccacccgcgtcggggccttctgcctgttcgcc
acccatttccacgagctgacggccctggccgaccagctgcccgccgtcaacaacctgcac
gtcacggcgctcaccagcaacgacaccctcaccatgctctatcgcgtcaggcccggggtg
tgcgaccagagtttcgggattcacgtagcggagctggccaacttccccaagcacgtgatc
gagagcgccaaggagaaagccctggaactggaggaattccagaacgtcggaaaaccacgg
gagtcggatgaatccgagcccgccgccaagagatgctaccgggagagagagcaaggcgag
aagatcatccaggacctgctgtccgaggtgagggcgttgccgttcccggaaatgtccgag
gaggacgtccgcgccaagctgaagcagctgaaagcccaggtggtggcccagaacaacggc
ttcgtcaacgaaatcatcgcccgcgtcaaggtgtcggccgagaaccggctccccggggcc
cgggccctgtag
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