KEGG   Tachyglossus aculeatus (Australian echidna): 119932504
Entry
119932504         CDS       T10703                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
tacu  Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tacu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119932504 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tacu03400]
    119932504 (TDP1)
DNA repair and recombination proteins [BR:tacu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119932504 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 119932504
NCBI-ProteinID: XP_038607679
LinkDB
Position
1:complement(158939503..159013708)
AA seq 604 aa
MTQESDHGKWTISSSDESTDEKFDNEKPSTSVSHPEEEKTIGLQYTCSDARKIAHRRKIS
PVKFDDKSVSAEISVAKRQKSSQEDLGWCLSSSDDETQPEHKPKCIEKVIPKEEKCSPQE
PSFHSTKHDQPPISRDLKEENESTDETQDSWDLMDKGNPFRFYLTKVKGIMPKYNSGALH
IRDILSPLFGTIVSSAQFNYCFDVDWLVKQYPPEFRNKPVLLVHGDKREAKARLHEQAKP
YENISLCQAKLDIAFGTHHTKMMLLLYEEGMRVVIHTSNLIHDDWYQKTQGIWLSPLYPR
LVHETHSSGDSVTHFKTDLINYLMAYNSPSLKEWIDIIKEHDLSETRVYLIGSTPGRFQG
QKKEDWGHFRLRKLLKEHSSSIPKEESWPIVGQFSSIGSMGVDESKWLCSEFKDSLVMLG
SSGKSQGGHDVPIHLIYPTVDNVRKSLEGYPAGGSLPYSIQTAQKQLWLNSYFHKWSAET
SGRSHAMPHIKTYMRLSPDFQQIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLFL
PSTFGLDTFTVKEKLFSRSREPTASFPVPYDLPPELYGSKDRPWIWNIPYTKAPDTHGNM
WVPS
NT seq 1815 nt   +upstreamnt  +downstreamnt
atgactcaagaaagtgatcatggaaaatggactatatccagtagtgatgaaagtactgat
gaaaagtttgacaatgagaaaccatctacttctgtatcccatcctgaagaagaaaaaaca
attggactccagtacacatgttctgatgctaggaaaattgcccatagaaggaagatatca
cctgtaaaatttgatgacaaaagtgtgtcggctgaaatctcagtagcaaaaagacagaaa
agttcccaggaagatttaggctggtgcctttcaagtagcgatgatgagactcaaccagaa
cataagccaaagtgcattgagaaggtgatccccaaggaagaaaagtgttctccacaagag
ccatcttttcatagcaccaaacatgaccaaccacccatcagtcgagatttgaaagaggaa
aatgaaagtacagatgaaacccaagacagctgggaccttatggataaaggaaaccccttc
agattttacctcactaaagtcaaaggaattatgccaaaatacaactctggtgcacttcat
attagagacattttatctccactttttgggacaattgtatcttctgctcagtttaactac
tgctttgatgtggattggcttgtgaaacagtatcctccggagttcaggaataaacctgta
ttactggtgcacggagacaagcgagaagcaaaggcccgattacatgaacaggcaaagcct
tatgaaaacatttccctgtgccaggccaaattggatattgcattcggaacacaccatacg
aaaatgatgctgctattatatgaagaaggcatgcgagttgtcatacacacatccaatctt
attcatgacgattggtaccagaaaactcagggaatatggctgagccccttatatcctcga
ctggtgcatgaaacccatagttctggtgactcagtaacacattttaagactgatctgata
aattacttgatggcttacaattctccttccctcaaagaatggatagatatcatcaaggaa
catgacctttctgaaaccagagtctaccttattggatcaacccctggacgatttcaagga
caaaaaaaggaagactggggccactttaggcttagaaagcttctgaaagaacattcttca
tccatacctaaagaagaatcttggccaatagtgggtcagttttcaagtattggctcaatg
ggagttgatgaatctaagtggctgtgttctgagtttaaagatagcctggtgatgctagga
agcagtggaaaatctcaaggaggacatgatgttccaattcatttgatttatcctactgtg
gataatgtgcggaaaagcttggaaggctatcccgctgggggatctcttccatacagtatc
caaactgctcagaaacaactgtggctgaattcatattttcataaatggtcagcagaaaca
tcaggacgcagccatgccatgcctcacattaagacgtacatgagattatctccggacttc
caacagattgcttggttcttagtaacaagtgctaatctgtctaaggctgcatggggagct
ctggagaaaaatggcactcagctgatgatccgttcctatgaacttggagttcttttcctg
ccttcaacatttggtttggatacattcacagtaaaggaaaaattattttcaagaagtcgt
gaaccaacagcctcatttcctgtaccttatgatttaccaccagaactttatggaagtaaa
gatcgtccatggatttggaatattccctataccaaggctccagatactcatggaaatatg
tgggttccatcttga

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