Tachyglossus aculeatus (Australian echidna): 119933085
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Entry
119933085 CDS
T10703
Symbol
SHANK1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
119933085 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
SH3_1
PDZ
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
119933085
NCBI-ProteinID:
XP_038608295
LinkDB
All DBs
Position
10:complement(49453237..49495252)
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AA seq
2217 aa
AA seq
DB search
MPRSPASSEEERRSASECPEGGSESDSSRDGRGTRGPGRAGAGGISLASAHRLQGRSMSV
PDDAHFSMMMVFRIGIPDLHQTKCLRFNPDATIWAAKQQVLCALSESLQDVLNYGLFQPA
ASGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKF
LEYVQLGTSEKVARLLDKGLDPNYHDSDSGETPLTLAAQLEGSVDVIRTLCLGGAHIDFR
ARDGMTALHKAVCARHCPALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYH
RAQLGTADENGWQEIHQACQRGNSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCA
RILLYRGANKEMKNNSGQTPFQVAVIAGNFELGELIRNHRDQDVVPFQESPKYAVRRRGG
PGGGGLAVPPPLLLRANSDTSMALPDWMVFAAPGAPTPGAPGPPGPVSGPPPPSHPTHPA
GPSTKLSSGTLRSASSPRGARARSPSRGRHPEEGRRQPRGRPSSSGTPREVPAAGPGSSA
GPGGPGGSLGSRGRRRKLYTAVPGRSFMAVKAYQAQGEGEISLSKGEKIKVLSVGEGGFW
EGQVKGRVGWFPSECLEEVANRSQEGKQDSRSDKAKRLFRHYTVGSYDSFDAPSDYIIKE
KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDF
LIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVARHPDMEEAARKKAPQQAKRLPPPA
ISLRSKSMTSELEEMEYEPPPGPSVEKKRTVYQMALNKLDEILAAAQQTISASEGPSPGG
LTSLGKPHTKSFFATESSYDPHHRSPANYERPSYLPPGPGLMLRQKSIGAAEDERPYLTP
PVMKFSRSLSVPGSEEIPPPPTTSPPEPPYSTPPASSSGRHTPSPRGGPSGPTASPLASF
DGGPPPPEPRGAGPGREQRDKGLYHPPSPLPAAHHHGAPPHHHHHHHHHHHHAPSQPPPP
ASSAAAASSSSSSHYHHHAHPPHPPEMETGGSPDDPPPRLALGSQPSLRGWRGGLPAPPP
PAPSPSPAAASSHHAVSLGGGPPSPALRYFQLPPRASSAAMYVPARSGRGRKGPLVKQTK
VEGEPQKGGGSTGSPSGPAPVEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAAEPPARPG
PRGPARARPGPGLAAAPRPRLCPRPRRCPRPPPLPPASPGPATLDFTSQFGAALVGAARR
ESGGAGAGVGAGWHSEARRRSALFLSTDVGDEDGAAADGFGGSATPGPRLRHSKSIDEGM
FSGEPYLRLEVGGAGGGGGGGGGGYALGGGGGGGGYAAGRPYGGGTAGISAFTSFLPPRP
LVHPLTGKALDPTSPLGLALAARERALKESSEGGGGPRPPSPRYEPPPPPPPAHPHHLPH
SHLHHHPLPPPPEPVLRLWGATSPEPVRRELGYHRPPGLGLGLGLGLAEKPSAGSPPAAR
RSLLHRLPPGPLLLQLGGPGPDAPLPTGKGWRGGGGGGGAVEEAERLPLHVRFLENCEGG
RPAGGPEDGERGPPPPPSPRRRGPQGPPSPLTSPRATGEENGLPLLVLPPPAPSVDVDDG
EFLFSEPLPPPLEFSNSFEKPESPLTPGPPHPLPEPPAAGPPPPPASAGPAAAAPPAPAT
LDSTASSLTSYDSEVATLTQGSGGAGPLPAPAGDAAQPPAPGPEPPAAAPEPPAGTDSGI
EEVDSRSSSDHPLETISSASTLSSLSAEGGGGIGGPDLLDTYVAYLDGQAFGGGVGVGVA
YAPKLRARAGLAGPLRPAPGGLREVATATSHTVSVTGAGAGGEGLLALGEPEVGPVPAPL
PAPPVVVAASSSSLPRKLLPWEEGPGPPLPPAPPSPAMAAASALASVKASIISELSSKLQ
QFGGAAGGALPWARGGTAPAAGPAPGAGTGGGTAGGEGPEPPSYVPDRTASLQRQRLSDD
PPSSLLSKPPVSSLFQSWPKPPPPPPPPPPPPGPSSGPGGGAPSPGGGPGRHLQGVEFDM
RPPLLRRAPSPSLLPPSDHKVSPAPRPSSLPILPSAPLYPGLFDLRGSPTGGGGGPGAGP
AGVAGDPFAPVFVPSPAGLGAAAAAAVSARSLSPTRLLTLPPDKPFGAKPLGFWTKFDVA
DWLEWLGLSEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atgccccggagcccggcgtccagcgaggaggagcgacgcagcgcgtccgagtgtcccgag
ggcgggtcggagtcggacagctcgagggacggccgggggacgcggggcccggggagggcc
ggggccggggggatcagcctggcctccgcccaccgcctgcaaggccgctccatgtccgtg
cctgacgacgcccacttcagcatgatgatggtcttcaggatcggcatccccgacctgcac
cagactaaatgtctccgcttcaacccggatgcgaccatctgggcggccaagcagcaggtc
ctttgcgcgctgagcgagagcctccaggacgtgctcaactatggcctgttccagcccgcc
gcctccggccgtgatgccaacttcctggaggaggagcggctgcttcgcgagtacccacag
tcctttgagaagggcgtgccgtacctggagttccggtacaagactcgggtgtacaagcag
acaaatctggatgagaagcagctggcaaagctgcacactaagacggggctgaagaagttt
ctggagtacgtacagctcgggacgtcggagaaggtggcccgcctgctggacaaggggctg
gaccccaactaccacgactctgattctggggagacccctctgaccctcgcggcccagctg
gagggctcggtggacgtgatccggaccctctgcctcggcggcgcccacattgacttccgc
gcccgcgatggcatgacagccctgcacaaggccgtgtgtgcccgacactgccccgccctc
acggcactgctggatctcggcggctcccccaactacaaggatcgtcgcggcctgaccccg
ctcttccacacggcgatggtcgggggtgacccgcgctgctgtgagctgctgctgtaccac
cgggcacagctgggcacagccgacgagaacggctggcaggagatccaccaggcctgccag
cggggtaactcccagcatctagaacatctactcttctacggggcagagcccggagctcag
aacgcttctgggaacacggccctgcacatctgtgccctctacaacaaggagacgtgcgct
cggatcctgctgtaccgaggggccaacaaggagatgaagaacaacagtggccagaccccg
ttccaggttgcggtgatcgcggggaacttcgagctgggggagctgatccggaaccaccgg
gatcaggatgtggttccctttcaggagtcgcccaagtatgcggtgcggcgccggggaggc
cccggaggcggggggctggccgtgcccccacccctgctgctccgggccaacagcgacacc
agcatggccctgcctgactggatggtctttgcggcccccggagcccccactcccggcgcc
cccgggcctcccggcccggtctccggacccccgcccccctcccaccccacgcaccccgcc
gggcccagcaccaagctcagcagtgggaccctccgcagcgccagcagcccccggggtgcc
cgcgcccgctccccgtcccggggacggcatcctgaggaaggccggaggcaaccgcgtggg
cggcccagctctagtgggacaccgcgggaagtgccggcggccgggccggggtcctccgcg
ggccccgggggtcccgggggctcgctcggcagccggggccggcggaggaagctgtacacg
gccgtgcctggccgctccttcatggctgtgaaagcgtaccaggcccaaggcgagggcgag
atctccctcagcaagggagagaagatcaaggtgctcagcgtgggggaaggcgggttctgg
gaaggacaagtcaaaggtcgcgtcggctggttcccctccgaatgcctggaggaagtagcc
aaccgctcccaggaggggaagcaagacagccggagcgacaaagccaagcgtctcttccgc
cattacacagttggctcctacgatagctttgatgcccccagtgactatatcattaaggag
aagacggttttgctgcagaaaaaggacagtgagggctttggctttgtgctgcgaggggcg
aaggcgcagacccccatcgaggagttcacaccaacgccggccttccccgccctgcagtac
ctggagtccgtggatgaggggggtgtcgcctggagggcggggctgcgcatgggagacttc
ctcatcgaggtgaacggccagaacgtggtgaaggtcgggcaccggcaggtagtgaacatg
atccgccaggggggcaacacgctgatggtcaaagtagtcatggtggcccggcacccggac
atggaggaggccgcccgcaagaaagcaccacaacaggctaagcgtctgcccccgccagcc
atctccctgcgctccaagtccatgacgtctgagctggaggagatggagtacgagccaccc
ccggggcccagcgtggaaaagaagcggacggtctaccagatggcgctcaacaaactggac
gagatcctcgcagctgcccagcagaccatcagtgccagtgagggccccagcccgggtggg
ctcacctctctgggcaaaccccacaccaagagcttcttcgccactgagtccagctatgac
ccccatcaccgctccccggccaactacgagcggccctcctacctgccgccgggccccggg
ctcatgctgaggcagaagtcgatcggagccgcggaggacgaacgcccctacctgaccccc
ccggtcatgaagttcagccgcagcctgtcggtgcccggctccgaggaaatccccccgccc
ccgaccacgtcgccccccgagcccccgtacagcaccccgccggcctcctcctcgggccgc
cacaccccgtcgccccgcggaggcccctccgggcccaccgcctccccgctcgcctccttc
gacggagggcccccgccccccgagccccggggggccggccccggaagggagcagcgggat
aagggcctgtaccatccgccgagccccctcccggcggcccaccaccacggggccccgcct
caccaccatcaccaccaccaccaccaccaccaccacgctccctcgcagcccccgccgccc
gcctcctccgccgccgccgcctcctcctcctcctcctcccactaccaccaccacgctcac
ccgccccacccgccggagatggagacggggggctccccggacgaccccccgccccgcctg
gccctggggtctcagcccagcctgcggggctggcggggcggtctcccggcgccccctccc
ccggccccttccccctcgccggccgcggcctcctcccaccacgcggtctccctgggcggg
ggccccccgtcgccggccctccgctacttccagctgccccctcgggcgtccagcgcggcc
atgtacgtcccggcccgctccggccgcgggcgcaagggcccgctggtcaagcagaccaag
gtggagggggagccgcagaaggggggcggctcgacggggtcaccgtccggccccgctccg
gtggagaagaattcgatccccatccccaccatcatcatcaaggccccgtccaccagcagc
agcgggcgcagcagccagggcagcagcaccgaggccgccgagccccccgcccggcccggc
ccccgcgggcccgcccgagcccgccccgggcccggcctcgccgctgccccccggcctcgc
ctctgcccccggcctcgccgctgcccccggcctcccccgctgcccccggcctcgccgggc
ccggccaccctggacttcaccagccagttcggcgcggcgctggtgggggcggcccggcgg
gagagcggcggggccggggccggggtcggggccggctggcacagcgaggcccgccgccgc
tcggccctcttcctgtccaccgacgtcggcgacgaggacggggccgcggccgacggcttc
gggggctccgccacgcccggcccccggctgcgccactccaagtcgatcgacgaggggatg
ttctcgggagagccctacctgcggctggaggtcggcggggccgggggcggcggcggcggc
ggcggcggcggctatgccctgggtgggggcggcgggggcgggggctacgcggccggccgc
ccctacgggggcggcacggcgggcatcagcgccttcaccagcttcctgcccccgcggccc
ctggtccaccccctgacgggcaaagcccttgaccccacgtcgcccctgggcctggccctg
gccgcccgggagcgggccctcaaggagtcgtccgagggcggcggcgggccccggcccccg
tcgccccgctacgagccgcccccgccgcccccgccggcccacccgcatcacctcccgcac
tcccacctccaccaccaccccctgcccccgcccccggagccggtcctgcggctctggggc
gccacgtccccggagcccgtccgccgggagctgggctaccaccgcccgccgggcctgggc
ctgggcctgggcctgggcctggccgagaagccctccgccggcagcccgcccgccgcccgc
cgctccctgctgcaccgcctgccccccggcccgctcctgctgcagctggggggcccgggc
cctgacgcccccctcccaacggggaaaggctggcggggcggcggcggcggcggtggggcc
gtcgaggaggcggagcggctgcccctgcacgtccgcttcctggagaactgcgagggcggc
cggccggccggcgggccggaggacggggagcgggggccgccccctccgcccagcccccgg
cggcgcggcccgcagggccccccgagccccctgacctcgccccgggccaccggcgaggag
aacgggctgcctctgctcgtgctgcccccgccggccccctccgtggacgtggacgacggc
gagttcctcttctccgagccgctgccgccgcccctcgagttctccaacagcttcgagaag
cccgagtcgccgctgacccccgggcctccgcaccccctgcccgagcccccggccgccggc
cctccgccgccccccgcctccgccggcccggccgccgccgcccctccggccccggccacc
ctggactccaccgcgtccagcctgacgtcctacgacagcgaggtggccaccctgacccag
ggcagcgggggcgcggggcccctccccgccccggccggcgacgccgcccagcccccggcc
cccggcccggagcccccggccgccgccccggagcccccggccggcacggactccggcatc
gaggaggtggacagccgcagcagcagcgaccacccgctggagaccatcagcagcgcctcc
accctgagcagcctgtccgccgaggggggcggcgggatcggggggccggacctgctcgac
acctacgtggcctacctggacggccaggccttcgggggcggcgtcggggtcggggtcgcc
tacgcccccaagctgcgggcccgggccggcctggcgggcccgctgcggccggccccgggg
ggcctgcgggaggtggccaccgccaccagccacacggtctcggtcaccggggccggggcc
gggggcgaggggctgctggccctgggggagccggaggtcgggccggtccccgcgcccctc
cccgcgccccccgtcgtcgtcgccgcctcctcctcctcgctgccccgcaagctcctgccc
tgggaggagggcccgggcccgcccctgcccccggccccgccgtcgcccgccatggccgcc
gcctcggccctggcctcggtcaaggccagcatcatcagcgagctcagctccaagctgcag
cagttcggcggggcggccggcggggccctgccctgggcccggggcggcacggcccccgcc
gccggacccgcccccggggccgggacagggggtggcacggccggcggggaaggccccgag
ccccccagctacgtgcccgaccgcacggcttccctgcagcggcagaggctctccgacgac
cccccgtcttcgctcctgtccaagcctccggtcagcagcctcttccagagctggccgaag
ccgccgccgcccccgccgccgccgcccccgcccccggggccgtcgtcggggccgggcggg
ggcgccccgtcccccggcgggggccccgggcggcacctgcagggcgtggagttcgacatg
cggcccccgctgctccgccgggcccccagcccgtccctgctgcccccctcggaccacaag
gtcagccccgccccccggccctcctccctgcccatcctgccctccgccccgctctacccg
ggcctgttcgacctgcggggctcccccaccggcgggggcggcgggcccggggccggcccg
gccggggtggccggagaccccttcgccccggtcttcgtgccgtcgcccgccgggctggga
gccgccgccgccgccgccgtcagcgcccggtccctgtcgcccacccgcctgctgaccctg
ccgccggacaagccgttcggggccaagccgctgggcttctggaccaagttcgacgtggcc
gactggctggagtggctgggcctgtccgagcaccgggcccgcttcctggaccacgagatc
gacggctcccacctgcccgccctgaccaaggaggactacgtggatctgggcgtcacgcgg
gtcggccaccgcatgaacatcgaccgagcactcaagttcttcctggagaggtga
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