Tachyglossus aculeatus (Australian echidna): 119933088
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Entry
119933088 CDS
T10703
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03020
RNA polymerase
Brite
Enzymes [BR:
tacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119933088 (POLR1A)
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119933088 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119933088
NCBI-ProteinID:
XP_038608300
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Position
10:19397558..19480407
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AA seq
1729 aa
AA seq
DB search
MLVFKDVPWRRLKGVSFGMYSAEEIRKLSVKSITNPRYLDGVGNPAPNGLYDLSLGPADN
KEVCSTCTQDFQNCPGHLGHIDLPLTVYNPLFFEKLFLLIRGSCLNCHLLTCPRPVIHLL
LCQLRVLEVGALQGVYELEATLSRFLEENPNASATEIQDELEQYTRELLDNNPLGSQGSQ
VKNVCESKRTLIAHFWKSSMTSKRCPHCKTGRSLVRKEHNSKLTVTYPGVARRKSKKSAK
DSEKDQEKTQPSSAIDDAQLGRRGYLTPDTARDHIVALWENEGFFLNHLFSRIEITENVE
AGFNPEMFFLDLVVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVELIQKLLALMAREK
KLCRETAETAAEKESEEPEESSVPMDRSFLGLIPGQSHTDKLYNIWIRLQSHVNIVFDSE
MDKLMTDKYPGVRQILEKKDGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPLVFATK
LTYPQPVTPWNVQELRQAVINGPNTHPGASMVINEDGTRTALSSGSPSQREAVAKQLLTP
ATGRPKPQGMKVVYRHVKNGDVLLLNRQPTLHRPSIQAHRARVLPGEKVLRLHYANCKAY
NADFDGDEMNAHLPQSELGRAEANVLACTDEQYLVPKDGQPLAGLIQDHMVAGAGMTTRG
CFFTREQYMELVYRGLTDKVGRVKTFPPAILKPYPLWTGKQIVSTLLINVIPENHLALNL
SGKAKINGKAWVKESPRATPGFDPETMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCC
YEVYGGETSGKVLTCLARLFTAYLQLYKGFTMGVEDILVRPQADIRRRTVIEESTLCGHR
AVRAAFNLPETASQEEVQGRWQDAHLSQDQKDFNMVDLKFKEEVNHYSNEINKACMPFGL
HRQFPENNLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEVTP
LSGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDL
TVRDSDGSVIQFLYGEDGLDIPKTQFLQSKQFPFLADNYEVIKRSKHLDEVLSRMDPQQG
QQHFRALRRWQRKHVASPPREGAFLNFSQKIQAAVRALNLSGGNKNGRDPTAQEMLKMWY
ELDEKSRKKYQKRVVPCPDPSLAVWRPDIYFASVSETFESKVDAYVTEWAAQAENSCVKT
ELSPESLRTLLHLKWQRALCDPGEAVGLLAGQSIGEPSTQMTLNTFHFAGRGEMNVTLGI
PRLREILMVASANIKTPMMSVPVLNTKKALKRVKKLKKQLTRVCLGEVVQKINVQESFCT
EGKANKFHLFQIRFNFLPPEYYQQEKCLKPEDILYFMENRFFKLLMETIKRKSSKLTAFN
LVNSRRANQRDLDTDEDAPASQLQENFEDDKEVEGPIVDGEAEEGDADATDKKHREKQEE
EVDYESEEEEHEENDENEDEQEDEEGDGEERQEDEEAGLLPEGDGQAPSSLRHVGRRKSG
SQADGMAELRIQAVRNVHPNIQDYAYDPVEGLWCEVSLKLPLMKVHFDLCSLVVSLAQHV
VVYETKGITRCLLNDATKKNGEKELVLNTEGINLPELFKYASALDLQRLYSNDIHAMANT
YGIEAALRVIEKEIKDVFAVYGIKVDPRHLSLVADYMCFEGVYKPLNRYGIQSNSSPLQQ
MTFETSFKFLKQATMMGAQDELRSPSACLVVGKVVKGGTGLFDLKQPLR
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgttcaaggatgtgccatggcggcggctgaagggagtttcctttgggatgtac
tcggccgaggaaatcaggaaactgagcgtgaaatccatcaccaacccccgctacctggac
ggcgtggggaacccggcgccgaacgggctgtacgacctgtccctggggccggccgacaac
aaggaggtgtgctccacctgcacgcaggacttccagaactgccccggacacctgggccac
atcgacctgcccctcaccgtctacaaccccctcttcttcgagaaactcttcctcctgatc
cgcggctcctgcttgaactgccacctgctgacgtgccctcgccccgtgatccacctcctg
ctctgccagctgcgggtcctggaagtgggggccctccagggggtctacgagctggaggcc
accctcagccggtttttagaagaaaatcctaatgcctccgccaccgagattcaggatgaa
ttggagcagtacacgagggaactactggacaacaacccgctgggatcccagggctctcaa
gtgaaaaacgtgtgcgagagcaagagaacgctgatcgcccatttctggaagtcgagcatg
acctccaagcgatgccctcactgcaagactgggcggtcgctggtgcgaaaagagcacaac
agcaagctgacggtcacctacccgggagtggcccgcaggaagtccaagaaatccgcgaag
gactcagaaaaggaccaggagaagacccaaccgtcctcagctatcgatgacgctcagttg
ggaagacgaggctacctgactcccgacacagcccgagaccacatcgtggccctgtgggag
aacgaaggtttctttctgaatcacctcttctcaagaattgaaatcacggagaacgtggag
gcgggcttcaacccggaaatgttcttcttagacctcgtggtggtcccgccgtccaggtac
cgccccgtcaatcgcctaggggaccagatgtttaccaacggtcagacggtcaacctgcag
gccgtcatgaaggacgtggagctgatccagaagcttctggctctgatggcccgagaaaag
aagctgtgtcgggagacggcggagacggccgccgaaaaggagtcggaggagcccgaggag
tcctcggtcccaatggatcggtcgttcctggggttgatcccgggacagtcgcacacggac
aaactctacaacatttggatccgcctgcagagccacgtgaacatcgtatttgacagtgaa
atggacaagctaatgacggacaagtatcccggcgtccggcagatcctggagaagaaagac
ggcctgttccggaagcacatgatggggaagcgcgtggactacgccgcccgctcggtcatc
tgcccggacatgtacatcggcaccaacgagatcgggatacccctggtgtttgccaccaag
ctgacctacccgcagccggtcacgccgtggaatgtccaggagctgaggcaggcggtcatc
aacggccccaacacccaccccggggcctccatggtcatcaacgaggacgggacccggacg
gccctgagctccggcagcccgtcccagcgggaggccgtggccaagcagctcctcaccccc
gccaccggtcgccccaagccccagggcatgaaagtggtttaccgccacgtgaagaacggg
gacgtgctgctgctgaaccgccagcccaccctgcacagaccgtccatccaagcccaccga
gcccgggtcctgcccggagagaaagtgctcaggctgcactacgccaactgcaaagcctac
aacgccgacttcgacggcgacgagatgaacgcccacctcccccagagcgagctgggccgc
gccgaagccaacgtcctggcctgcacggacgagcagtacctcgtccctaaggatggccaa
ccactagcggggttgatccaggaccacatggtagccggagcaggcatgaccacgcgaggc
tgcttcttcaccagggagcagtatatggagctggtgtaccgggggctgaccgacaaggtg
ggacgcgtgaagaccttccctcccgctatcctgaagccgtatcccctgtggaccgggaag
cagatcgtctctacgctgctgatcaacgtgatccccgaaaatcacctcgcgctgaatttg
tcggggaaggcgaagatcaacgggaaggcctgggtgaaggaaagtccccgagccactcct
ggcttcgaccccgagaccatgtgcgagtcccaggtgatcatccgagaaggggagctgctc
tgcggggtgctggacaaagctcactacggcagctcggcctacggcctggttcactgctgc
tacgaagtgtacgggggcgagaccagcggcaaagtgctcacctgcctggctcgcctcttc
accgcctacttacagctctacaagggtttcacgatgggcgtggaagacattctggtcaga
ccccaagccgacatcaggagacgcaccgtcattgaagagtccaccctctgtggccacagg
gcggtcagagcggcgtttaacctgccagaaacagcatcgcaggaggaggtccaggggcgc
tggcaagacgcccatctctcccaagatcagaaggatttcaacatggtagatctgaagttc
aaggaagaagtgaaccattacagcaatgagatcaataaggcctgcatgccgtttggcctt
caccggcagttcccggaaaacaacctgcagatgatggtgcagtcgggagccaagggatcg
accgtgaacacgatgcagatctcctgtctgctgggtcagattgaattggaaggccgaaga
cctccactgatgccctctggaaagtcgctgccgtgtttccagccctatgaagtgaccccc
ctatccgggggcttcgtcaccggcagatttctcaccggcatcaaaccaccagagttcttc
tttcactgcatggccgggagggaaggtttggtagatacagctgtcaaaaccagccgatcg
ggatacctccagaggtgtatcatcaagcatctggaaggactggtggtccaatacgaccta
acggtgcgagacagcgacggcagcgtgattcagtttctgtacggggaagacgggttggac
atccccaagacacagttcctgcagtccaaacagttccctttccttgccgacaactacgag
gtgatcaagaggtcaaagcacctggatgaagttttatccagaatggatccgcagcagggt
cagcagcacttccgagccctccggaggtggcagagaaagcacgtggcctccccgccgagg
gaaggggccttcttgaacttttcgcagaaaatccaggctgccgtccgggcgctgaacctc
tcgggaggcaataaaaacgggcgcgatcccacggcccaagagatgttgaagatgtggtac
gagttggacgagaagagccgaaagaaataccagaagcgggtcgtcccttgccccgatccc
agtctggccgtctggcgtccagacatctacttcgcctccgtgtccgagacgttcgaaagc
aaggtcgacgcctacgtgacggagtgggccgcccaggctgagaacagttgcgtgaaaacc
gaactctctcccgaaagcttgaggaccctgctgcatctgaagtggcaacgtgctctgtgt
gaccccggagaggcggtgggcctgctagccggccagagcatcggggaaccctccacccag
atgaccctcaacaccttccacttcgccggcagaggagagatgaacgtcaccttggggatc
cccaggttgagggaaatcctcatggtggccagcgccaacatcaaaactcccatgatgagc
gttccagtgctcaacaccaagaaggctctcaagagggtgaagaagctgaagaagcagctg
acccgcgtgtgcttaggggaggtggtgcagaaaatcaacgtccaggaatcgttctgcacg
gaaggaaaggcgaacaagttccacctcttccagatccggtttaacttcctgccgcccgag
tactaccagcaagagaaatgtctgaagccggaggacattttatatttcatggagaacagg
ttcttcaaacttctgatggagaccatcaagaggaagagcagtaaactgactgctttcaac
ctggtgaactcgcgcagagcaaaccagcgggatctggataccgatgaggatgctcccgcc
agtcagctgcaggaaaattttgaggacgacaaggaagtggaagggccgatcgttgacggc
gaggcggaagaaggagatgccgacgccactgacaagaagcacagagaaaagcaagaggaa
gaggtggactacgagagcgaagaggaagagcacgaggagaacgacgagaacgaggacgaa
caagaggacgaggagggcgacggcgaggagcggcaggaggacgaggaggccggtctgctt
ccggagggagatggccaagcgccttcctccctcagacacgtcgggagaagaaagtccgga
agccaggcagatggaatggccgagctgaggattcaggccgtgaggaacgtccatccaaac
atacaggactacgcctacgacccagtggaaggtctgtggtgtgaggtatccctgaagctg
cccctgatgaaggtgcacttcgacctgtgctccctggtggtctccctggcccagcacgtg
gtggtctacgagaccaagggaatcacccgctgcctcctgaacgacgccaccaagaagaac
ggggagaaggagctcgttttaaataccgaggggatcaaccttccggagctcttcaaatac
gccagcgccctggatctgcagcgtctctattccaacgacatccacgccatggccaatacg
tacggcatcgaggcggccctgcgggtgatcgagaaggaaatcaaagacgtgtttgccgtg
tacggaatcaaggttgatcctcgccacctttccctggtggcagattacatgtgcttcgaa
ggcgtctacaaaccactgaaccgctacgggatccagtccaactcgtcccccctgcagcag
atgacgttcgaaaccagcttcaagttcctgaagcaagccaccatgatgggtgcgcaggac
gagctgagatcgccttcggcgtgcctggtggttgggaaggtggtcaagggcggaactggc
ctgttcgacctcaagcagcccctgagataa
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integrated database retrieval system
