Tachyglossus aculeatus (Australian echidna): 119933155
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Entry
119933155 CDS
T10703
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03082
ATP-dependent chromatin remodeling
tacu04714
Thermogenesis
tacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119933155 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119933155 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119933155 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tacu03021
]
119933155 (SMARCC2)
03036 Chromosome and associated proteins [BR:
tacu03036
]
119933155 (SMARCC2)
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119933155 (SMARCC2)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119933155 (SMARCC2)
PBAF complex
119933155 (SMARCC2)
GBAF(ncBAF) complex
119933155 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
119933155
NCBI-ProteinID:
XP_038608414
LinkDB
All DBs
Position
10:complement(59267517..59295743)
Genome browser
AA seq
1261 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLPRPNIFLHQEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVCP
VPANLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWTPASEVEASVEDPPTPDKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMEPTGKDEDENGAGSKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQGDADTKAGRKGKELDDLVPEPAKGKPELTSASQQMLSFPDKGKEKPA
DMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGSR
TQDECILHFLRLPIEDPYLEDSEASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVAS
AAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPER
AVEESGAEEARAESQSGEEKKESKEPREGVVAAEEDGKDRPSEPPKKEEEKGKEGDGQKE
LEKGGREPVAESEKEPKEGQEEEALKEVVEAEGERKTKVERDIGEGNLSTAAAAALAAAA
VKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLAD
RQAFHMEQLKYAEMRARQQHFQQLHQQQQQPPPPPPPPPPPLPPGSQPVPATAAAPGPPA
GHPLAAAAAPSVAPSPVGAGGPAPAEQVGQAGTVVGQQPPPPPPPPAGAPQAGTTPSSGA
PPAGPHGPSQFPSQQTPPTMIPGATPGSGHPSMAGNTPLALPYGMPPPPPPPPPPPPPPP
PPPPPSVPFSSLADSISLHLPPHPNLHGHHLPFAAGTLPPLPPPPAAASSSSSSSSVSAA
AAATSFPLGPGSAATHSPTIVAAVQGSLLPGPGPLPDPGTSLPQDPTAPSPGPVPPVLPA
Q
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtattacgaggcggcggacacc
gtggcccagttcgacaacgtgcggctgtggctcggaaagaactacaagaagtacatccaa
gccgagccgcccaccaacaagtctctctccagcctggtggtgcagttgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaatgcgccgctcaccaagctgccgataaaatgt
ttcctggacttcaaagccgggggggccttgtgccacattcttgcagccgcctacaagttc
aagagcgaccagggatggcgacgctacgacttccagaacccgtcccgaatggaccgaaac
gtggagatgttcatgaccatcgagaagtccctggtgcagaataactgcctgcctcggccc
aacattttcctgcaccaggagattgagcccaagctgctggggaagctgaaagacatcatc
aagaggcaccaggggacggttacggaggataagaacaatgcatcccacgttgtgtgcccg
gtgcctgcaaacctggaggaagaggagtgggtgcggccaatcatgaagagagacaagcaa
gtcctcctacactggggctactaccccgacagctacgacacatggacccccgccagcgaa
gtggaggcctccgtggaggatccaccgacacctgacaaacccaggaaggtccacgccaag
tggatcctggacaccgacaccttcaatgagtggatgaacgaggaagactacgaggtgaac
gacgacaagaatcccgtgtctcgccgcaagaagatctcggccaagaccctgaccgacgag
gtcaacagccctgactcggaccggcgggacaagaagggaggcaactacaagaagaggaag
cgctcgccctctccgtctcccacccctgaggccaagaagaagaatgccaaaaaggggccc
tccacgccgtacaccaagtccaagcgcgggcaccgagaggaggagcaggaggacctcacc
aaggacatggacgagccctcacccgtccccaacgtggaggaggtgacgctgcccaagaca
gtgaataccaaaaaggattcggagtcggcgcctgtgaaaggaggcaccatgacggacctc
gatgagcaggaggatgagagcatggagcccacgggcaaggatgaggacgagaacggggcc
gggagcaagggggagcagaccaagaaccccgacctgcacgaggacaacgtcaccgagcag
actcaccacatcatcatccccagctacgctgcctggttcgactataacagcgtccacgcc
atcgagcgcagagctttgcccgagttcttcaacggcaagaacaagtccaagacgccagag
atctacctggcttaccgcaacttcatgatcgacacgtaccgactgaacccgcaggagtac
ctcacctccaccgcctgccgccgcaacctggccggcgacgtctgtgccatcatgagggtc
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgcggagagccggccg
acccccatgggccccccgcccacctcgcacttccacgtcctggcggacacaccctcggga
ctggtgcccctgcagcccaaaacgccccagggccgccagggtgatgccgacaccaaggcc
gggcgcaagggaaaagagctggatgacctggtgccggagccggccaaggggaagccggag
ctgacgtccgcctcccagcagatgctcagcttccccgacaagggcaaggagaagccggcc
gacatgcagaacttcggcctccgcacggacatgtacaccaagaagaatgtcccttctaag
agtaaagctgcagccagtgccacgcgggagtggactgagcaggagacgctgttgttgctt
gaggcactggagatgtacaaggatgactggaacaaggtgtcggagcacgtggggagccgc
acccaggacgagtgcatcctgcacttcctgcgcctgcccatcgaagacccctatctcgag
gactcggaggcctccctgggccccctggcctaccagcccgtgcccttcagccagtccggg
aacccggtcatgagcaccgtcgccttcttggcctccgtcgtcgacccccgcgtggcctcc
gccgccgccaagtccgccctggaggagttctccaagatgaaggaggaggtgcccacggcc
ctggtggaggcccacgtgaggaaggtggaggaggcggccaaagtcacgggcaaggccgac
ccagccttcggcctggagagcagcggcattgcgggcaccgcctcggacgagcccgagcgc
gccgtcgaagagagtggggctgaggaggcccgggcggaaagccaatctggcgaagagaag
aaggagtccaaggaaccgcgagaaggggtcgtggccgcggaagaagatgggaaagacagg
ccgagcgagccgcccaagaaggaggaggagaaggggaaggagggcgacggccagaaggag
ctggagaagggaggcagggagcctgtggccgagtccgagaaggagcccaaggagggccaa
gaggaggaggcgttgaaggaggtggtggaggccgagggtgagaggaagaccaaggtggag
cgggacatcggcgaagggaatctgtccacagcggcggcggctgccctggccgccgccgcc
gtcaaggccaagcacctggccgcggtggaagaacggaagatcaagtccctggtggctctg
ctggtggagacccagatgaagaagctggagatcaagctgaggcactttgaggagctggag
accatcatggaccgggagcgggaggccctggagtaccagcggcagcagctgctggcggac
aggcaggccttccacatggagcagctcaagtacgcggagatgcgagcgcgccagcagcac
ttccagcagctgcaccagcagcagcagcagcccccgccgccgcccccgcccccgccgccg
cccctgccccccggctcccagcccgtcccggccaccgccgccgcccccggcccgcccgcc
ggccacccgctggctgcggcggctgcgccctccgtggccccgagccccgtgggggccggc
ggcccggcccccgccgagcaggtggggcaggcgggcacggtcgtcgggcagcagccgccg
ccgccgccgcccccgcccgccggagctccccaggccgggaccaccccgtcgtcgggcgca
ccccccgccggaccccacggcccctcccagttccccagccagcaaactcctcccacgatg
ataccaggggccacgccgggcagcgggcaccccagcatggccggtaacactcctttggct
ttgccctacggcatgccgccgccgccgccgccgccaccaccaccaccaccaccgccgccg
cctccgcctcctccatccgtccccttcagtagcctagccgactccatcagccttcacctc
cctcctcaccctaacctgcatgggcaccacctaccattcgccgcgggcaccctgcccccg
ctccccccgccccccgccgccgcctcctcctcctcctcctcctcctctgtgtccgccgcc
gccgccgccacctccttccccctggggccggggtccgccgccacccacagccccaccatc
gtggcggccgtgcagggcagcctcctgcccggcccgggcccgctgccagatccgggcacg
tccctgccccaggaccccacggcccccagccccggcccggtcccgccagtgctgcccgcc
cagtga
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