Tachyglossus aculeatus (Australian echidna): 119933316
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Entry
119933316 CDS
T10703
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119933316 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tacu03041
]
119933316 (PRPF40B)
Spliceosome [BR:
tacu03041
]
Complex A
U1 snRNP components
U1 related factors
119933316 (PRPF40B)
Complex B
119933316 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DTW
DUF4936
ECM10
Motif
Other DBs
NCBI-GeneID:
119933316
NCBI-ProteinID:
XP_038608697
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All DBs
Position
10:52869813..52880097
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AA seq
855 aa
AA seq
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MMPPPFMPPPPGIPPPFPPMALPPLPQRPPAVPPGMMPPMIPPLGGPPPLAQMPGLGPPM
IPGMLVPPGPTGPAPVPVPAVTAPGVDTAGSVGAGAGALGAPPKPPWSERLPPDGRVYYY
GVDSERGPWDVPGARQTKAELLAQGPWREFHSDTGRPYYYNTQSRESRWARPPDLDQLEA
LIQQEEAVGKQPQPPAQPEPSPNTAPSPTVSPEPPVHPEPAQPDACEPPDQAEPPDDGAQ
PPEEASSSDSGPRDDEEPHPEPERPGASWNCKEKAKQAFKELLRDKGVGSTASWEQAMKM
VVTDPRYSALPKLSEKKQTFNAYKAQREKEEKEEARLRAKEAKETLQRFLERHSRMTSGT
RYRRAEQTFGDLEVWAVVPERDRKEIYDDVLFFLAKKEKEQAKQLRRRNIQALKRILDGM
SSVSFDTTWAEAQQHLLEDPRFTQDRDLQNMDKEDALICFEEHIRLLEKEEEEERERVRL
RERRQQRKNREDFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLF
KFYVEDLKARFHDEKKIIKDVLRDRGFGVEVSTTFEDFAHVISFDKRAATLDAGNIKLTF
NSLLEKAETREREREKEAARRLRRREAAFRGMLRQAAPPLEPGTSWDQVRERFVCDFAFE
QITLESERIRLFREFLQVLESECLPIPKGRKHSRKAKKHHHKRPPHSPSGSESEEDDLPP
PPPKRRKRNPSESGSEPSSSPESAESGGAGPGPRGLPFSRIPPGADHSSRKSKKQKKKSK
KKRHKSNSPESEAEREPEQEEREREARRGEPQPRSPARRGVKKEKTGWDTSESELSEGEL
ERRRRTLLQQLDDQP
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctccgcccttcatgccgccgcctcccgggatccccccgcccttccctccgatg
gcgctgcccccgctgccccagaggccgcctgccgtgcccccgggcatgatgccgcccatg
atcccgcctctgggaggaccaccccctctggctcagatgccggggctggggcctcccatg
atcccgggaatgctggtgcccccagggcccacaggacctgctcctgtcccggtccctgca
gtgacggctccgggcgtggacacggccggctctgtcggggccggggccggggccttgggg
gcccccccgaagcccccatggagcgagcggctgcctcccgacggccgtgtgtattactat
ggcgtggacagtgagcgtggtccatgggatgtccctggggcccgtcagaccaaggccgag
ctgctggcccagggcccgtggagagagttccactcggacacagggcgcccgtattactac
aacactcagagccgggaatcccgctgggcccggcccccggacctggaccagctggaggct
ctgatccaacaagaggaggcagtggggaaacagccacagcctccagcccagcccgagccg
tcccccaacaccgcccccagccccaccgtgtcccccgagcctcccgtgcaccccgagccc
gcccagccggacgcctgtgagcccccagaccaggcagagccaccggatgatggggcccag
ccgccagaggaggccagcagcagcgacagcgggccgcgggatgacgaggaacctcatccg
gagccggagcggcccggagccagctggaactgtaaggaaaaggccaagcaagccttcaag
gagctgctgcgagataagggcgtgggctccactgcctcatgggagcaggccatgaagatg
gtggtgactgatccccgctacagcgccctgccaaagctgagcgagaagaagcagacgttc
aacgcctacaaggcacaacgcgagaaggaggagaaggaggaggcccggctgagggccaag
gaggccaaggaaaccctgcagcgcttcttggagcggcacagccgcatgacctcgggcacc
cgctaccggcgggcggagcaaacgttcggggatctggaggtctgggccgttgtgcccgag
cgagaccgcaaggagatctacgatgatgtgctcttcttcctcgccaagaaggagaaggag
caggccaagcagctcagacgtcgaaacatccaggccctgaagcgcatcctggacggaatg
agcagcgtcagtttcgacaccacgtgggctgaggcacagcagcacctcctggaagacccc
cgcttcacccaggaccgcgacctgcagaacatggacaaggaggatgcgctgatctgcttc
gaggagcacatccgcctgctggagaaggaggaggaagaggagcgggagcgtgtgcgtttg
agagagcggcggcagcagcgcaagaaccgcgaagacttccagaccttcctggacgagctg
catgagacggggcagctgcactccatgtccacctggatggagctgtacccagcggtcagc
accgatgtccgctttgccaacatgctgggacagccgggctccaccccgctggacctcttc
aagttttacgtggaggacctgaaggcccgattccacgatgagaagaagatcatcaaggac
gtcctgcgggaccggggcttcggcgtggaggtcagcaccacattcgaggactttgcccac
gtcatcagcttcgacaagcgggcggccacgctggacgccggaaacatcaaactgaccttc
aacagtctgctggagaaggcagaaacgcgggagcgggagcgggagaaggaggcggcgcgg
cggctacggcgacgggaggcggccttcaggggcatgttgaggcaggcggcccctccgctg
gagcccggcaccagctgggatcaggtccgcgagcgcttcgtgtgcgacttcgccttcgag
cagatcacgttggagtccgagcggatccgcctcttccgggagttcctgcaggtgctggag
agcgagtgtctgccaatccccaagggtcgcaagcacagccgaaaggccaagaaacaccac
cacaagcgtcctccacactccccttctggctctgagtccgaggaggacgaccttcccccg
ccgccccccaaacggcggaagcggaacccctccgagtcgggctccgagccctcgtcctcc
cccgagtcggctgagagcggcggggccggcccggggccccggggtctccccttcagccgc
atccccccgggagcagatcacagttcccgaaaatccaagaaacagaaaaagaaaagcaag
aaaaagaggcacaagtcgaacagcccggagagtgaggcggagcgagagccggagcaggag
gagcgagagcgggaggcccggcggggggagccccagcctcggtctccagcccgccggggg
gtcaagaaggagaagacaggctgggacacgtcggagagcgagctgagcgagggggagctg
gagcggcggcgccggactctcctgcagcagctggatgaccagccgtga
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