Tachyglossus aculeatus (Australian echidna): 119933505
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Entry
119933505 CDS
T10703
Symbol
CNOT4
Name
(RefSeq) CCR4-NOT transcription complex subunit 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119933505 (CNOT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tacu03000
]
119933505 (CNOT4)
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119933505 (CNOT4)
04121 Ubiquitin system [BR:
tacu04121
]
119933505 (CNOT4)
Enzymes [BR:
tacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119933505 (CNOT4)
Transcription factors [BR:
tacu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
119933505 (CNOT4)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119933505 (CNOT4)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119933505 (CNOT4)
Ubiquitin system [BR:
tacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119933505 (CNOT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Rtf2
DZR_2
Nup35_RRM_2
Torus
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
119933505
NCBI-ProteinID:
XP_038608974
LinkDB
All DBs
Position
10:complement(47315166..47444961)
Genome browser
AA seq
714 aa
AA seq
DB search
MSRSPDAKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKISENRKHLASVRVVQKNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKNMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKLNPNFLQLSTGTVDKNKNKVTPLQSPIDKPSDSLSIGNGDNSQQISNSDTPSPP
PGLSKPNPVIPISSSNHSARSPFEGAVTESQSLFSDNFRHPNPIPSGLPPFPSSPQTSSD
WPTAPEPQSLFTSETIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDITRKALADLIEKEL
SVQEQPALSPTSLHNAPSHTTTAKGSGSGFLHPAAAPTNANALGGGGTFPVLPQRFPPFP
QHRAVYNSFSFPAQGARYPWMAFPRNSLMHLNHTANPTSNSNFLDLNLPPQHSTGLGGIP
IADNSSSVESLNMKEWQDGLRALLPNININFGGLPNASSPSNANHSAPTSNPATTDGLNW
DSPGSWMDPAIITGIPASTGNSLDSLQDDNPPHWLKSLQALTEMDGPSAAPSQTPQHSNP
FSTQIPLHRASWNPYSPPSNPTSFHSPPPGFQTAFRPPSKPPTDLLQSSALDRH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtagccctgatgcgaaggaagaccctgtggaatgccccctttgcatggagccc
ctggagatcgatgatatcaacttttttccttgcacatgcggctatcagatttgtcgcttc
tgttggcatcgtatccgcacagacgaaaacggactctgtccagcttgcagaaagccatat
ccagaagaccctgcagtgtacaaaccactctcccaggaagagctgcaaaggataaagaat
gagaagaaacagaaacagaacgagaggaaacagaagatctcagagaatcggaaacacttg
gccagcgtacgggtcgtgcagaagaacctggtctttgtggtagggctctcccagcgccta
gccgatccagaggttttaaaacgacccgaatattttgggaagtttggtaaaatacacaaa
gttgtcattaataacagcacatcgtacgccggctcccagggtccaagtgccagcgcgtac
gtaacttacatccggtcagaagatgcgctcagagccattcagtgtgttaacaatgtggtg
gtagatggcagaacactcaaggcatctttaggtacaacaaaatactgcagttacttctta
aagaatatgcagtgtccaaagcccgactgcatgtacttgcatgaactgggggacgaagca
gccagcttcacaaaagaagagatgcaggcgggcaaacaccaagaatatgaacagaagtta
cttcaagagttatataaactaaaccccaattttctccagctgtccacgggtacagttgac
aagaataagaacaaagtgaccccactgcagagccccatcgacaaaccgtcagattctcta
agtataggaaacggcgacaactcacagcagatttcaaacagcgacacaccttcgccacct
ccaggtttatccaaacccaatccagtcatccccatcagttcctccaatcacagcgcccgg
tctcctttcgaaggggcagtaacagagtcacagtcgctcttttccgacaacttccgacat
cccaaccctatcccgagtgggctccccccgttccccagctccccacagacttccagcgat
tggccaactgcaccagaaccacagagcctcttcacatcagaaaccatcccagtatcctcc
tcgacagactggcaagcggcattcggctttggttcctccaaacagcaagaggacgacttg
ggcttcgaccccttcgacatcacccgcaaagccttagcagacctgatagagaaggaactg
tcggttcaagagcagcccgccctgtcgcccacctctctccataacgccccctcacacact
acgaccgcgaaagggtcggggtccggcttcctgcacccggccgccgcccccacgaatgcc
aacgccctgggcggcggcggcaccttccccgtcctgccccagaggttccctccgtttccc
cagcaccgggcggtgtacaactcgttcagttttccggctcagggggcccgctacccttgg
atggcctttccacgcaatagcctcatgcacttgaaccacacagcaaaccccacctcaaac
agtaatttcttggacttgaatctcccgccacagcacagcacgggtctgggagggatccct
atagcagacaacagcagttctgtagagagtttaaatatgaaggaatggcaggacgggcta
agggcacttctacccaacattaacatcaactttggtggactgcccaatgcctcttccccc
tccaacgccaaccacagtgcgccaacgtccaaccctgccaccacggacggcctgaattgg
gacagccctggcagctggatggaccccgccatcatcacaggaatcccggcgtccacagga
aacagtttagactctcttcaagacgacaatcctccacactggctcaagtccctccaggcc
ctcacagagatggacggccccagtgccgccccgtcccagaccccccagcacagtaacccc
ttcagcacacagatcccgctgcacagagccagctggaatccctactcgcccccttccaat
cccaccagcttccactcccctccccccggttttcagacggccttcagaccccccagcaaa
ccccccacagatttactacagagttcagcactggaccgccattag
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