Tachyglossus aculeatus (Australian echidna): 119935694
Help
Entry
119935694 CDS
T10703
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119935694 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119935694 (COL25A1)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119935694 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119935694
NCBI-ProteinID:
XP_038611061
LinkDB
All DBs
Position
12:complement(5245858..5807567)
Genome browser
AA seq
677 aa
AA seq
DB search
MAGPGGAEQGGRWLALGTALAGLLAVLSAASCLYLGVRTGHLQERLAAIEASRGAGEGAA
AGGAGASAAAGGGGGGAAPWSRPPPAALHRLQALLHEKLHRLLAQKSYEHLAKVRTVREA
TPECNCPAGPPGKRGKRGRRGEYGPPGQPGPQGPPGPKGDKGDQGDQGPRMVFPKINHGF
LSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEHG
LMGPQGPPGQKGSLGAPGVPGTDGQMGEPGLPGSVGQDGIPGIKGDPGERGEKGDVGESG
PKGDLGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGL
PGLPGMKGERGESGPAGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDSGALGPR
VSVLRAPPGQKGDPGATEIIDYNGNIHDALQRITTLTVTGPPGPPGPQGLQGPKGEPGSP
GTPGADGEQGLKGSKGDIGDSGLPGEKGGIGLPGLPGSNGAKGEKGDSGLPGPQGPSIIG
PPGPPGSHGPPGPMGPHGLPGPKGASGLDGKPGSRGTDGPIGPHGPAGPKGERGEKGAVG
EPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDA
PCQLGPDGLPMPGCWQK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccggggggagcggagcaggggggccgatggctggcgctgggcacggcgctg
gccgggctgctggccgtcctgtcggccgcctcctgcctctacctcggggtgaggaccggg
cacctgcaggaacggctggccgccatcgaggcctcccggggggcgggagaaggagcagca
gctggaggagcaggagcatcagcagcagcgggaggaggaggaggaggagcagccccctgg
tcccggccgccccccgccgccctgcaccggctgcaggccctgctgcacgaaaagctgcac
agactcctggcccagaaatcgtacgaacatttggctaaagtaagaacagtcagagaagca
acgccagagtgcaactgcccagcaggtccgccagggaaacgagggaagaggggcagaaga
ggagaatatggacctcctggccagcccggtcctcagggtccccctggtccgaaaggcgat
aagggagatcaaggtgatcaaggtcctcggatggtgtttcctaaaatcaatcatgggttt
ctctctgctgatcagcagctcattaaacgccgcctcattaagggtgaccaaggacaggct
gggcctcctggacccccaggccccccaggcccaagaggaccccctggggacactgggaaa
gacgggccccgtggaatgccaggtgtaccgggtgaaccaggaaaaccaggagaacacggc
ttgatgggacctcagggacctcctggacaaaagggttctcttggagctcctggtgtgcca
ggaacggatggacaaatgggggaaccgggtttgcctggatcagtggggcaggacggtatt
ccaggcattaagggtgaccctggagagagaggagaaaagggagacgttggcgagagtgga
cccaaaggtgacctcggtgaaaagggtgaccctggatcgtcagctgcaggaataaaggga
gaacctggagaatctggtcgcccaggacaaaagggtgaaccagggcttccggggcttcct
ggacttccggggataaagggggaaccagggttcatcggtcctcagggagaacctgggttg
ccagggttaccaggaatgaagggtgaacgtggagaatcggggcctgctggaagaggggag
cgaggtgaacctggagctcctgggccaaaggggaaacaaggtgaatcaggaactagaggc
ccaaaggggtcaaagggtgaccgtggagataaaggagattctggtgctttgggaccacgg
gtaagtgtgctcagggcccccccgggacaaaagggagacccgggagcaacagagatcata
gactacaatggcaatattcatgatgccttgcagaggattaccaccttaacagtcacgggc
cccccaggaccacctggacctcagggattacaaggaccaaagggagagccaggatctcca
ggaacacccggagcagatggagagcagggtctgaaaggctcgaagggagacatcggggac
tctggccttccgggggagaagggaggaattggactccctgggttaccgggttctaatggc
gcgaaaggagaaaaaggagactcgggtctgcctggtcctcagggcccttccattattgga
ccgccaggaccgccgggttctcatggcccaccagggcctatgggacctcatgggcttccc
ggaccaaagggagcatctggcttagacggaaagccaggatcccggggtacagatggccct
attggtccccatggtccagcaggccccaaaggagaaagaggtgaaaagggagcagtagga
gaacctggacccagaggcccatatggtttgcctggaaaagatggagagcctggtcttgat
ggctttcctggtcctcgaggagagaagggtgacctaggggaaaagggagaaaagggattc
cgtggagttaagggggaaaaaggggaaccgggtcaacctggcctggatgggctggatgcc
ccttgccaattggggcctgatggattaccaatgcctgggtgctggcagaagtga
DBGET
integrated database retrieval system
