Tachyglossus aculeatus (Australian echidna): 119936069
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Entry
119936069 CDS
T10703
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03082
ATP-dependent chromatin remodeling
tacu04714
Thermogenesis
tacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119936069 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119936069 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119936069 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tacu03021
]
119936069 (SMARCC1)
03036 Chromosome and associated proteins [BR:
tacu03036
]
119936069 (SMARCC1)
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119936069 (SMARCC1)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119936069 (SMARCC1)
PBAF complex
119936069 (SMARCC1)
GBAF(ncBAF) complex
119936069 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
119936069
NCBI-ProteinID:
XP_038611380
LinkDB
All DBs
Position
13:complement(2964170..3082158)
Genome browser
AA seq
1163 aa
AA seq
DB search
MAKGGKARRESPGPRITTSKRFVLNTKAKENNKLEIYQSVRRRLVGWVRAFCFVKVKNHK
EGGGASGSAAAAAAGTPGSAAAAAASGASSGGSGLALWRRKDGGPSAKFWESPDTVSQLD
SVRVWLGKHYKKYVQADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFK
AGGTLCHILGAVYKFKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPTIYLI
PDIELKLANKLKDIVKRHQGTFTDEKSKASHHIYPNPTSPDDEEWLRPVMKKDKQALVHW
GFYPDSYDTWVHASDIDAEIEDPPIPEKPWKVQARWILDTDNFNEWMNEEDYEVDENKKP
VSFRQRISTKNEEPVRSPERRDRKATASTRKRKHSPSPPPPAPAESRKKAGKKGQASLYG
KRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDE
ETLTTGGKEDEDPGKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPE
FFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWG
LVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRTPQVPAAQQMLNFPEKNKEKP
TDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT
QDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASA
AARAALEEFSRVREEVPLELVEAHVRKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKP
EGAEEEKMETETEGQQPEKAENKGESETDEGDKAQDGENEKNSEKEQDCEASEDPKSEEK
DAEENKQNADASKERESDVGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIK
SLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELR
ARQQMEQQQHGQSAPPAHQHMTPLGGAAGHPGMLPHQQPPPYPMMHHPMPPPHPPQPGPG
AMMPGRMMPAVAANVHPAGGGPAPPGLPPMPGNLIGPRAPLAAPNGMYPPPPQPPAAPPP
QTPAADGVPPPPAASTTTASAAP
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcggcaaagcgcggcgcgaaagtcccggaccgagaataactacttcaaag
cgctttgtgctcaacactaaagctaaggaaaacaataaacttgaaatttaccaaagcgtt
cgtcgccggctggttgggtgggttcgggccttctgctttgtgaaagtcaaaaatcacaaa
gagggggggggcgcctcgggctcggcggcggcggcggcggcggggaccccggggtcggcg
gcggcggcggcggcgtcgggggcgtcgtcggggggttcgggcctggcgctgtggcggcgg
aaggacggcggcccctccgccaagttctgggagagcccggacaccgtgtcccagctggac
tccgtgcgcgtctggctcgggaagcactacaagaagtacgttcaagcggatgctcccacc
aacaagacgctggccgggctcgtggtgcagcttctccagttccaggaagacgctttcggg
aaacacgtcaccaaccctgccttcaccaaactccctgcaaagtgcttcatggatttcaag
gctgggggtaccttgtgtcatatcctcggagccgtttacaagtttaaaaatgaacaggga
tggcgcagatttgacctgcagaacccctcccgaatggatcgcaacgtcgagatgttcatg
aacattgagaaaacactagtacagaataattgcctgagcagacctaccatctacctcatt
ccagatattgagctgaagttggctaataagctgaaggacattgtcaaacggcatcaggga
accttcaccgacgagaaatcaaaagcctcccaccacatttatcctaaccctacctcaccg
gatgacgaagagtggttgagacctgtgatgaaaaaagataagcaggcgctcgttcactgg
gggttttacccagacagctacgacacttgggttcacgctagcgatatcgacgcggaaatc
gaagaccctccaatcccggaaaagccgtggaaggtgcaggccaggtggatcttggacacc
gataacttcaacgagtggatgaacgaggaagattacgaagtggacgagaacaagaagccc
gtgagctttcgccagcgcatttcgaccaagaacgaagagcccgtccgaagtcccgagagg
agagacaggaaagcgacggcgagcacgaggaagaggaaacactcgccttctcctccgcct
cccgcgccggcagaatcgaggaaaaaggccggaaagaaagggcaagccagtctgtatggg
aagcggcgaggtcagaaagaggaagatgaacaggaagatctcaccaaggacatggaggac
ccaaccccggtacccaacatagaggaagtggtgcttcccaaaaacgtgaatccaaagaaa
gacagtgaaaacacgccggtcaaaggaggaacagtggctgacctagatgaacaggatgaa
gaaactctgaccaccggcggaaaggaagacgaagaccccgggaagggggatcagagccga
tcgatcgacccgggcgaagacaacgtgacggagcagacgaatcacatcatcatccccagc
tacgcgtcgtggttcgactacaactgtatccacgtcatagagcgccgggctcttccagaa
ttcttcaatgggaaaaacaagtccaagactccagaaatatacctggcttatcgtaacttc
atgatcgacacgtaccgcttaaaccctcaagaatacctaaccagtaccgcttgcaggagg
aacctgaccggagacgtctgtgctgtaatgagggttcacgccttcctggagcagtggggt
ctggtgaattaccaagtggatccggaaagccggcccatggccatgggccccccgcccacc
cctcacttcaacgtcttggctgatacgccctccgggcttgtgcctctccacctcaggact
cctcaggtccctgctgctcagcagatgttgaattttcccgagaagaacaaagagaagccc
accgatttgcagaactttggcctccgcacggatatttactccaagaaaaccttagccaag
agtaaaggagccagtgctggaagggagtggactgaacaggagaccctgctgctattagag
gcgctggagatgtacaaggatgactggaacaaggtgtcggagcacgtcgggagccgcacc
caggacgagtgcatcctgcatttcctgcgcctgcccatcgaggacccgtacctggagaac
tcggacgcctcgctgggccccctggcctaccagcccgttcctttcagccagtccgggaac
ccggtcatgagcaccgtcgccttcttggcctccgtcgtcgacccccgcgtggcctccgcc
gccgccagggcagctctagaggagttctcccgggtccgagaggaggtgcccctggaactg
gtcgaggcccacgtccggaaggtccaagaggcggcgcgggcgtccgggaaggtggatccg
acctacggcctggagagcagctgcatcgccggcaccgggcccgacgagcccgagaaaccc
gaaggggccgaagaagagaaaatggaaaccgaaacggaagggcagcagccggaaaaggcg
gaaaacaagggagaaagtgagacagatgaaggcgacaaagcccaggatggagaaaatgag
aagaacagtgagaaggaacaagattgcgaagccagcgaggatcccaaatcagaggagaaa
gacgccgaggagaacaagcagaatgccgacgcgtccaaagagagagagagcgacgttggg
aaaaagaaggtggagcatgaaatttccgaaggaaacgtggccacggccgccgcggccgcc
ctcgcttccgccgccaccaaagcgaagcatctcgctgcagtcgaggagaggaagatcaag
tccctggtggccctcctggttgagacccagatgaagaagctggagatcaaacttcgtcat
ttcgaggaactggaaacgatcatggaccgggagaaagaagccctggagcagcagaggcag
cagttgctgacggagcgccagaacttccacatggagcagctgaaatacgcggagctcagg
gcccgccagcaaatggagcagcagcagcacgggcagagcgctccccccgcccatcagcac
atgaccccgctcgggggagcggccggccatccgggcatgttgccccatcagcagccccct
ccctaccctatgatgcaccacccgatgccccctccgcacccgccccagccaggtcccggc
gccatgatgcccggccgcatgatgccggccgtcgcggccaacgtccaccccgccggaggg
gggcccgccccgccgggactgccgccgatgcccggaaacctcatcggaccacgggcgccg
ctcgccgcgcccaacggcatgtatccccctccgccgcagccgccggcagcaccgccgccg
caaacgcccgccgccgacggggtccccccacctccggcggcctcaaccaccaccgcctcg
gccgccccttag
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