Tachyglossus aculeatus (Australian echidna): 119938294
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Entry
119938294 CDS
T10703
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03082
ATP-dependent chromatin remodeling
tacu04714
Thermogenesis
tacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119938294 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119938294 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119938294 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tacu03000
]
119938294 (ARID1A)
03021 Transcription machinery [BR:
tacu03021
]
119938294 (ARID1A)
03036 Chromosome and associated proteins [BR:
tacu03036
]
119938294 (ARID1A)
Transcription factors [BR:
tacu03000
]
Eukaryotic type
Helix-turn-helix
ARID
119938294 (ARID1A)
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119938294 (ARID1A)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119938294 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
119938294
NCBI-ProteinID:
XP_038613997
LinkDB
All DBs
Position
16:48183578..48245663
Genome browser
AA seq
2323 aa
AA seq
DB search
MAAQVAPAAANAGGLGNPPPPPTPPTPPTPPSELKKPEPPPPPPPPPPPPRDEAGGEARA
QGGEMPADGEGPAGQDLPDGADAAGPDGEPGPKGSSNGNAGPRPALNNNLPEPGGDGAAP
TTTTTTAATTAPQPLPPPPPPPPPPPPPFPPPSYGFGPPYGRGPVAVAAAAAAAAAFHQH
GGQQSPGLAALQSGGGGGGGAGGAGGGGGGGGAGLDAFPGAQHNSHGDHGFPANHQYNSY
YPNRAAYPAPGYALGSPRAGTAAPGPSAASSKPPSAANSSAAPALQPPPPPPQRFGSLGA
PTGAGPQPTTATPTLNQLLTSPSSARGYQGYSGGDYGDGPAGKGPADLGAQYGAGGGGGQ
GWGAAGGAQQRSHHAPMSPGTGAGGGAATVAGGQPLSRTPQPSSPMDQMGKMRPQPYGGG
SNPYSQQPPQPGPPQAGAQQGHGYPGQPYGSQPPQRYPMTMQGRAQSAMGGLSYAQQLQP
YTQQGPSGYGQQGQAPYYNQQSPQPYSQPPPPQSAQPYQPPPQQSPSPYPPPQAAAQQHP
PQGQPSYSQPPPQQQQQQQAQSPYQQPQQAAATALAQQSGYQAAQAQPPQPSAYSQQRFP
PPQELSQDSFGSQASSAPSMASSKGGQDDMSLSLQSRPSSLPDLSGSLDDLAMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQPRSGPLSPAA
VPGSQMPPRPPSGQSDGIMHSAVSQPTISQDRGYMQRNPQIPQYGSPQAGSALSPRQSSA
GQMHTAMGSYQQNSVGGYGPQGGGGQYGPQGGYPRQPNYSAMPNANYASAGMGGGLNPMG
AGSQMHGQAAVVPPYSGMAPGRMGHAAMGSRPYGPNMANMANLPPQVGTGMCPPPGGLNR
KAQDAAAAAAAAMHAAANSIPNRPPGYPNMNQGGMMASGPPYGQGINSMAGMINPQAAPY
PMGGNMANNSGMAGSPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKIT
KLYELGSEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNK
NKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKVERGEDPPPDIFAAADSKKAQPK
VQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDA
FADGAGDPAAFPKRNSMTPNPGYQAGMNASELMGRVTYEPSKDPYGGMRKAPGSDPFMSA
GQGPNSGMGDPYSRPAGPGMGNMAMAQRQHYPYGGPYDRVRTEPGMGPEGSMGPGAPQPS
LMPSAPDSGMYSPSRYPPQQQQQPPQQPPQQRHDSYGNQFSTQGTPSGSPFPSQQATIYQ
AQQQNYKRPMDGAYGPPAKRHEGEMYNVPYGGGGGGGGGGQGQPPPQAPQLPPAPSQQAS
QPPAAQPSPQQDLYNQYGAAYPPPERRPAGGPQNQFPFQFGRDRVSAPAGAGAQQSLAPQ
MLGAPMASAPDGPQQGAMWQGRGELGYNYSNRPAAGAAPPGAAAAAAAYHGVSRTDELGH
ADQRVNHEGPWAPHGSRQPPYGPSAPVPPMARPPQSSYPPQTHIPQGSSPAPLPRALESR
TSPSKSPFLHSGMKMQKAGPPVPASHIAPTPSQPPMVRRDITFPPGSVEATQPVLKPRRR
LTTKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVE
YFRRCLIEIFGILREYEVGDPGQRRLLEPERLSKAPSPASPSAEGTAEAREEEDEAEEEE
DEEEPEEGRDREREAEGPSPRPAEEGEAGEGPPEGREDKLASKFDKLPVKVVPKSDPFVV
DCSDRLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTEPGPPRAPCPAAAAAAAASRKR
PPTAPGGGGGGGEGGAPAAEKRVTATMDDVLSARAGALAEEGGRRGAGRGRPPPPALPLG
GGPAPGRRHLKILEDEPRSKDETPLCALLDWQDALAKRCVGVSNTIRSLSFVPGNDLEMS
KHPGLLLVLSRLILLHHSHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEALRENTLV
TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFPTLGPHALLSPQRLVLEAL
SKLSIQDNNVDLILATPPFSRLEKLYGAMVRFLGDRKNPVCREMAVVLLANLAQGDSLAA
RAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLGHGAGPPFEPTSVDMMRRAARALLALA
KVDENHPEFTLYEARLLDISVSPLMNSLVSQVVCDVLFLIGRS
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccaacgccggcggcctgggaaacccgccgccg
ccgcccacgccgcccacgccgcccacgccgccctcggagctgaagaaaccggagccgccg
cctcctcctcctcctcctcctccgcctccgcgggacgaggcgggcggggaagcgcgggcc
caaggcggggagatgccggcggacggcgagggccccgcggggcaggacctccccgacggg
gccgacgcggcggggccggacggcgaaccgggcccgaagggctcctccaacgggaacgcg
gggcccaggcccgccctgaacaataacctcccggagccgggcggggacggggccgccccg
acgacgacgaccaccaccgccgccacgacggcgccgcagcccctgccgcctcctcctcct
cctccccctcctcctccgccgcccttcccgccgccgtcctacgggttcgggcccccgtac
ggccggggcccggtggccgtggccgccgccgccgccgccgccgctgccttccaccaacat
ggcggacaacaaagccctggcctggcggcgctgcagagcggcggaggaggcggcggagga
gcgggaggagcgggaggaggaggaggcggcggcggcgctggactggacgccttccccggc
gcccagcacaactcgcacggcgaccacggcttccccgccaaccaccagtacaactcctac
taccccaaccgcgccgcctaccccgcaccgggatacgcgctcggctccccgcgagcgggc
acggccgccccgggaccgtcggccgcctcctccaagccgccctccgccgccaacagctcg
gccgcccccgccctgcagccgccgccgccgccgccgcagcggttcggtagtttgggggcc
ccgaccggggccggcccgcagcccaccaccgccacccccaccctcaaccagctgctcacg
tcgcccagctcggcccggggctaccagggctactccgggggcgactacggggacgggccc
gccggcaagggcccggccgacttgggggcccagtacggagccggcggcggcggcggccag
ggctggggggccgccggaggggcccaacaaaggagccaccacgcgcccatgagccccggg
accggcgcaggaggaggagcagcaacagtagccggggggcaacccctctccaggacccca
cagccctccagcccgatggaccagatgggcaagatgcgtccccagccctacggcggcggg
agcaacccgtattcccagcagccgccgcagccggggcccccccaggccggggcccagcag
ggacacggctaccccggtcagccctacggctcccagccgccccagcgctacccgatgacc
atgcaggggcgggcccagagcgccatgggcggcctctcgtacgcccagcagctgcagccg
tacacccagcagggccccagcgggtacggccagcaaggccaggcgccctactacaaccag
cagagcccgcagccgtattcgcagccgccgccgccgcagtcggcccaaccgtaccagccg
ccgccccagcagtccccgtccccgtacccgccgccgcaggccgcggcacagcaacaccct
ccgcagggccagccctcctactcgcaaccgccgccgcagcagcagcagcagcagcaggcc
cagtccccctaccaacagccgcagcaggcggccgccacggcgctggcacaacagtccggg
taccaggcggcacaggcgcagccaccccagccatctgcctactcccagcagcgcttccct
cctccgcaggagctgtctcaggactcctttggctcccaggcgtcctccgccccttccatg
gcttccagtaaaggagggcaagacgacatgagcctcagtctccagtcgagaccctccagc
ctgccggacctgtccggctccctggacgacctggccatggggacggagggggccctgagc
cccggcgtgagcacctcgggcatctccagcagtcagggggagcagagcaacccggcgcag
tccccgttctcccctcacacctcgccccacctgcccgggatccgcgggccctcgccctcc
cccgtgggctcccccgccagcgtcgcccagcctcgctcaggacccctctcgccggccgcg
gtgccaggcagccagatgcccccccgcccgcccagcggccagtccgacggcatcatgcat
tcggccgtgagccagccgaccatctcccaggaccgaggttacatgcagaggaacccccag
atcccccagtacggctcgccccaggccggctccgccttatccccgcgccagtcttcggcc
gggcagatgcacaccgccatggggtcctatcagcagaactccgtggggggctacggaccc
cagggcggcggtggccagtacgggccgcaaggaggctaccccagacagccaaactacagt
gccatgcccaacgccaactacgcgagcgcaggaatggggggcggcctgaaccccatgggg
gccgggagccagatgcacgggcaggcggcggtggtgcccccctacagcgggatggccccc
gggaggatgggccacgccgccatgggcagccggccctacggccccaacatggccaacatg
gccaacctgccgcctcaggtcgggaccgggatgtgccccccgccggggggcctgaaccgg
aaagcacaagacgccgccgcggccgccgccgcagccatgcacgccgctgccaactccatc
cccaaccggcccccgggctaccccaacatgaaccaggggggcatgatggcctcggggcct
ccttacgggcaaggcatcaacagcatggccggcatgatcaacccgcaggccgccccctac
cccatgggcgggaacatggccaacaattcagggatggcggggagtccggagatgatgggc
ctcggggacgtcaaactcacgccggccaccaagatgaacaacaaggccgacgggaccccc
aaaaccgagtccaaatccaagaagtccagctcttccaccaccaccaacgagaagatcacc
aagctgtacgagctgggcagcgagccggagaggaagatctgggtggaccgctacctggcc
ttcaccgaagagaaggccatgggcatgaccaacctgcccgccgtgggccgcaagccgctg
gacctgtaccgcctctacgtgtcggtgaaggagatcggcggcttgacgcaggtcaacaag
aacaagaaatggcgggagctggccaccaacctgaacgtggggacctcaagcagcgccgcc
agctctctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaaggttgaacgc
ggggaggacccgccccccgacatcttcgccgctgccgactccaaaaaggcccagcccaag
gtccagcccccgtcaccagccggttctggctccatgcaagggccccagacgccccagtcg
accagcagctccatggccgaagggggagacctgaaacccccgacgccggcgtcgacgccg
cacagtcagatgccgcccttgcccggcatcaggagcaactcggtcgggctccaggacgct
tttgcggacggggccggcgatcccgcggcgttccccaagcggaactccatgacgccaaac
cccgggtaccaggcgggcatgaacgcctccgaactgatgggccgcgtgacctacgagccc
agcaaggacccgtacggcggaatgaggaaagctccggggagcgatcccttcatgtcggca
gggcagggccccaacagcgggatgggggacccttacagccggccggccggccccggcatg
ggcaacatggccatggctcagcgccagcactacccctacggcgggccttacgacagagtg
aggacagagcccggcatgggccccgaggggagcatggggcccggagccccgcagccgagc
ctgatgccttcggccccggactcggggatgtactctcccagccgctaccccccccagcag
cagcagcagcctccgcagcagccgccgcagcaacgacacgattcctatggcaatcagttc
tccacccagggcaccccttctggcagccccttccccagccagcaagccaccatttaccag
gcacagcagcagaactacaaacggcccatggacggagcctacggccccccggccaagcgg
cacgaaggggagatgtacaacgtgccgtacggcggcggcggcggcggcgggggcggcggg
caggggcagccgcccccccaggccccgcagctgcccccggcccccagccagcaagccagc
cagccgccggccgcccagccgtccccgcagcaggacctgtacaaccagtacggggcggcc
taccccccgccggagcgccggccggcgggcgggcctcagaaccagttcccgttccagttc
ggccgggaccgggtctcggcgcccgccggggccggcgcccagcagagcctggcgccgcag
atgctgggggcgccgatggcctcggcccccgacggcccgcaacagggcgccatgtggcag
gggcggggcgagctgggctacaactactcgaaccggccggccgcgggggccgccccgccg
ggggccgccgccgccgccgccgcctaccacggcgtgagccggacggacgagctgggtcac
gcggaccagcgggtgaaccacgagggcccctgggcgccccacgggagccggcagcccccc
tacggcccctcggcccccgtgccccccatggcgcggcccccccagtccagctacccgccg
cagacccacattcctcagggatccagccccgcccccctgccgcgggccctggagagccgc
acctcccccagcaagtccccgtttctgcactcgggcatgaagatgcagaaggcggggccc
cccgtgcccgcctcccacatagccccgacccccagccagccccccatggtccgccgggac
atcaccttcccgcccggctcggtggaggccacgcagccggtgcttaagcccaggcggcgg
ctcacgacgaaggatatcggaaccccagaggcctggagggtgatgatgtctctaaagtcg
gggctgctggccgagagcacgtgggccttggacaccatcaacatcctgctgtacgacgac
aacagcatcatgaccttcaacctcagccagctgccggggctgctggagctcctggtggaa
tacttccggcgctgtctcatcgagatcttcggcatcctgagggagtacgaggtgggagat
ccgggccagagaaggctactggagcccgagcggctcagcaaggcccccagtcccgcctcc
ccctccgcggaggggacggcggaggcccgggaggaggaggacgaggcggaggaagaagag
gacgaggaggagccggaggagggccgggaccgggagcgggaggcggaggggcccagcccc
aggccggcggaggagggggaggcgggcgagggcccgccggagggccgcgaggacaagttg
gccagcaagttcgacaagctgccggtcaaggtggtgcccaagagcgacccgttcgtggtg
gactgctcggaccggctgggccgggtgcaggagttcgacagcgggctgctgcactggcgc
atcgggggcggcgacaccacggagcacatccagacccacttcgagagcaagacggagccg
ggccccccgcgggcgccctgcccggccgccgccgccgccgctgccgcctcccggaagcgc
ccgccgacggccccgggcgggggcgggggcgggggcgaggggggcgccccggcggccgag
aagcgggtgacggccaccatggacgacgtgctgtcggcccgggccggggccctggccgag
gagggggggcggcggggggccggccgcggccgccccccgccccccgcgctccccttgggc
ggggggccggcgccgggccgccggcacctgaagatcctggaggacgagccgcgcagcaag
gacgagacgccgctgtgcgccctcctggactggcaggacgccctggccaagcggtgcgtg
ggggtgtccaacacgatccgcagcctgtcgttcgtgccgggcaacgacctggagatgtcg
aagcacccgggcctgctgctggtcctcagccgcctgatcctcctgcaccactcgcacccg
gagcgcaagcaggcgcccctgacctacgagaaggaggaggagcaggaccagggcgtcagc
tgcaacaaagtggagtggtggtgggactgcctggaggccctgcgcgagaacacgctggtg
accctggccaacatctcgggccagctggacctgtccccctaccccgagagcatctgcctg
ccggtcctggacgggctcctgcactgggccgtctgcccgtcggccgaggcccaggacccc
ttccccacgctgggcccccacgcgctgctctcgccgcagagactggtcctggaggccctg
agcaagctcagcatccaggacaacaacgtggacctcatcctggccacgccgcccttcagc
cggctggagaagctctacggggccatggtgcgcttcctgggcgaccgcaagaaccccgtg
tgccgcgagatggccgtggtcctcctggccaacctggcccagggcgacagcctggcggcc
cgcgccatcgccgtccagaagggcagcatcggcaacctgctgggcttcctggaggacagc
ctggcggccacgcagttccagcagagccaggccgggctggggcacggggccggcccgccc
ttcgagcccaccagcgtggacatgatgcgccgggcggcccgggcgctgctggcgctggcc
aaggtggacgagaaccacccggagttcacgctgtacgaggcgcggctgctcgacatctcc
gtctcgcccctgatgaactcgctggtctcgcaggtcgtctgcgacgtactgttcctcatc
ggccggtcatga
DBGET
integrated database retrieval system
