Tachyglossus aculeatus (Australian echidna): 119938535
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Entry
119938535 CDS
T10703
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04151
PI3K-Akt signaling pathway
tacu04510
Focal adhesion
tacu04512
ECM-receptor interaction
tacu04518
Integrin signaling
tacu05165
Human papillomavirus infection
tacu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119938535 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119938535 (TNR)
04518 Integrin signaling
119938535 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119938535 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119938535 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119938535 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119938535 (TNR)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119938535 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
FN3_DSCAM-DSCAML_C
EGF_Tenascin
EGF_Teneurin
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_VIN3
EGF_2
Fn3_Dep-1_2nd
FN3_Tor_3rd
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
119938535
NCBI-ProteinID:
XP_038614327
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All DBs
Position
16:complement(8593469..8641994)
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AA seq
1354 aa
AA seq
DB search
MGADGETRALKNLLISVNLILLGSVLTPSDGQLEVTTERVRRPAAAEAGGVAGAERPMVF
NHVYNINVPLDSLCSSGLEASAEREVSAEEERRTEFTDQTTDSGSQVTFTHRINLPKQAC
ECSNSVRVMQELLSRIEMLEREVSILRDQCNSNCCPDNAATGQLDYVPHCSGHGNFSLEL
CGCVCHEGWLGKNCSEPDCPLGCSSRGVCVDGQCVCDSDSSGDDCSEARCPAGCSPRGLC
VDGRCVCEEAFSGEDCGEPRCPGDCSGKGTCTNGTCFCQEGYVGEDCGQRRCLNACSGRG
VCQAGRCSCEEGYWGPDCSAVAPPEDLRVAGISDRSVELEWDGPMAVTEYVISYQPTVRG
GLQLQQRVPGDWSTVTLRELEPGLTYNISIYAVISDILSLPVSARVATHLSTPQGLRFKT
ITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQVPSDVTSFNQTGLKPGEEYTVNVV
ALKEQARSPPTSASVSTLIDGPTQILVRDVSDTVAFVEWTPPRAKIDFILLRYGLVGGES
GKTTFRLQPPLSQYSVQALRPGSRYEVSVSGARGANESDATTTHFTTEIDAPKNLRVVSR
TATSLDLEWDNSEAEVQDYRVVFSTLAGEQYHELLVPRSPGPTTKATLADLEPGTEYGVG
ISALLDSQQSVPATMNARTELDSPRGLMVTASSETSISLIWTKADGPIDHYRITFTPASG
MSSEITVPKDRTAYTLTELEPGTEYIISVTAERGRQQSLESTVDAFTGFRPITHLHFSHV
TSSSVNITWSDPSPPADRLILNYNPRDQEEEAALEVSLDATKRHATLTGLRPATEYIVNL
VAVHGAVTSEPIVGSITTGIDPPKDISIGNVTEDSVMVSWAPPVAPFDYYRVSYRPTQVG
RLDSSVVPKTVTKYTVTDLSPATEYEISLNSVRGREESERICTLVHTAMDSPVDLTATNV
TPTEALLQWRAPVSEVESYVIVLTHFTDAGETILVDGVSEDYQLSDLLPSTHYTVTMYAA
SGPLTSSTVKTNFTTLLDPPTNLTATEVTRQSARISWQPPVAEVENYIVNYKATDGRRKE
LIVDAEDTWIRLEGLSENTEYTVLLQSAQDAVRSGVTSAVFTTGGRVFTHPQDCAQHLIN
GDTLSGVYTISIHGDLSQKMQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNL
EDEFWLGLDNMHKITLQGRYELRIDMRDGPEAAYASYDKFSIGDSRSLYKLRLGAYSGTS
GDSLTYHQGRPFSTQDRDNDVAVTNCALSYKGAWWYKNCHRTNLNGKYGESRHSQGINWY
HWKGHEFSIPFVEMKMRPYTPRPVTGRKRRSLQP
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgatggcgaaacccgggccctgaagaacctgctgatcagcgtcaacttgatt
ctgctgggctccgtcctcacgccgtccgacggccagctggaggtcacgaccgagcgagtc
aggaggccggcggcggccgaggcgggcggcgtggccggcgcagagcggcccatggtcttc
aaccacgtgtacaacatcaacgtccccctggacagcctctgctcctcgggcctggaggct
tcggccgagcgggaggtgagtgccgaagaggagaggaggacggagttcacggaccagacc
acagacagcgggagccaggtcaccttcacgcacaggatcaatctccccaagcaggcctgt
gagtgctccaactccgtccgggtcatgcaggagctgctgagtcgaatcgagatgctggag
agggaggtttccatcctccgggaccaatgcaactctaactgctgtccagacaatgcagcc
acagggcagctggactacgtccctcactgcagcggccacggcaacttcagtttggagttg
tgcggctgcgtgtgccacgagggctggctcggcaagaactgctcggaacccgactgcccc
ctgggctgctccagccgcggtgtgtgcgtggatggccagtgcgtctgtgacagcgactcc
agtggcgacgactgctccgaggcccgctgcccggccggttgcagcccccggggcctctgc
gtggacggacgctgcgtctgtgaggaggccttctctggggaggactgcggtgagccgcga
tgccccggggactgctcgggcaaagggacctgcaccaacggcacctgcttctgccaggag
ggctatgtgggtgaggactgcggccagcggcgctgcctgaatgcctgcagcgggcgagga
gtctgccaggccgggcgctgctcctgcgaggaaggctactggggcccggactgctcggcg
gttgccccacccgaggacttgcgagtggctggcatcagcgacaggtccgttgagctggaa
tgggacgggccgatggcagtgacggaatatgtgatctcttaccagccgacggtccggggg
ggccttcagctccagcagcgggtgcccggggattggagcaccgtcaccctcagggagttg
gaaccagggctcacctacaatatcagcatctacgctgtcatcagtgacatcctcagcctc
cccgtctcagccagggtggccacccatctctccactccccaagggctgcggttcaagacc
atcacagagaccactgtggaggtgcagtgggaacccttctcattttctttcgacggatgg
gagattagcttcatcccaaagaataacgaagggggcgtgatcgcccaggtccccagtgat
gtcacatccttcaaccagacgggcctgaagcctggggaggagtacactgtcaatgtggtg
gctctcaaagagcaagcccggagccccccgacctctgccagtgtctccaccctgattgac
ggcccgacccagatcctggtccgtgacgtctcagacacggtggccttcgtcgaatggacc
ccgcctcgagcgaaaatcgatttcatcctcctgcgatacggcctggtgggcggggagagc
gggaaaaccaccttccggctgcagccgcccctgagccagtactcggtgcaggccctccgg
cccggttcccgatacgaggtctcggtcagcggagcccgcggggccaacgagagcgacgcc
accaccacccacttcaccacagagatcgacgctcccaaaaacctgcgagtggtctcccgc
acagccaccagtctggacctggaatgggacaacagcgaggcggaagtgcaggattaccgg
gtggtgtttagcactctggccggagagcagtaccatgagctgttggtccccaggagcccg
ggcccaaccaccaaagccaccctcgccgacctggagccggggacggagtatggtgttggg
atctcagctctcctggacagtcagcagagtgtaccagccaccatgaatgcccggactgaa
ctggacagtcctcgagggctcatggtgacggcctcttcggagacgtcaatctctctcatc
tggaccaaggcagacggccccatcgaccactaccgaatcacctttaccccggcctccggg
atgtcctctgagattaccgtgcccaaggacaggactgcgtacacgctgacggagctggag
cccgggaccgagtacatcatctcggtcactgctgagcggggccggcagcagagcctggag
tccaccgtggatgccttcacagggttccggcccatcacccatctgcacttctcccacgtg
acctcctccagcgtgaacatcacctggagcgacccctcccctcccgcggacaggctcatc
ctcaactacaacccccgggaccaggaggaggaggcggcactggaggtctcgctggacgcc
accaagagacacgccactctgacggggctccggccggccaccgagtacattgtgaacctg
gtggccgtgcacggggcagtcacctcggagcccattgtgggctccatcaccacgggcatc
gatccccctaaagacatctcaataggcaacgtcaccgaggactccgtgatggtctcctgg
gccccacccgtcgcacctttcgactactatcgggtatcctatcgaccgacacaagtgggg
agactggacagctcagtggtgccgaaaaccgtcaccaaatacaccgtcaccgacctctct
ccggccaccgagtacgagatcagcctgaacagcgtgcgtgggcgggaggagagcgagcgc
atctgcaccctcgtgcacacagccatggacagcccagtcgatttgaccgccaccaacgtc
accccaacggaagccctgctgcagtggagggcaccagtgagtgaggtggagagctacgtc
attgtgcttacgcacttcacagatgctggcgagaccatcctggtggacggcgtgagcgaa
gattaccagctcagcgacctactccccagcacccattacacggtcacgatgtatgccgcc
agcgggcctctcaccagcagtaccgtcaagaccaatttcaccaccttgctggatcccccc
accaacctgacggccaccgaggtcaccaggcagagcgcccggatctcgtggcagccaccc
gtagcagaggtggagaactacatcgtcaactacaaagccaccgacgggcgccgcaaggag
ctgatagtggatgcagaagacacatggattcgcctcgagggcctgtccgagaacacggag
tacaccgtgctcctgcagtcagcccaggatgcggtcaggagtggggtcacctcggccgtc
ttcaccacagggggccgcgtgttcacccaccctcaggactgcgcccagcacctgatcaac
ggagacaccctcagtggggtttacaccatctccatccacggggacctgagccagaagatg
caagtctactgtgacatgaccacagacggcgggggttggattgtgttccagcggcgacag
aacggcctgactgacttcttccggaaatgggcagattaccgtgtcggttttggaaaccta
gaggatgaattttggctggggctggacaacatgcacaagatcacgttgcagggccgctac
gagctgcggatagacatgcgagatggcccggaagcagcctacgcctcctatgacaagttc
tccatcggggacagcaggagcctctataagcttcggctgggagcctacagcggcacctca
ggggattctttgacataccaccagggccgacctttctccacccaggacagggacaacgac
gtggctgtgaccaactgtgcgctgtcctacaagggggcctggtggtataagaactgccac
cggaccaacctcaacggcaagtatggcgagtccaggcacagtcaggggatcaactggtac
cactggaaaggccatgagttttccattcctttcgtggaaatgaagatgcgcccctacacc
ccccgccccgtgacagggaggaaacggaggtccctgcagccatga
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