Tachyglossus aculeatus (Australian echidna): 119939268
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Entry
119939268 CDS
T10703
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03030
DNA replication
tacu03420
Nucleotide excision repair
tacu03430
Mismatch repair
tacu03440
Homologous recombination
tacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119939268 (RPA1)
03420 Nucleotide excision repair
119939268 (RPA1)
03430 Mismatch repair
119939268 (RPA1)
03440 Homologous recombination
119939268 (RPA1)
03460 Fanconi anemia pathway
119939268 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tacu03000
]
119939268 (RPA1)
03032 DNA replication proteins [BR:
tacu03032
]
119939268 (RPA1)
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119939268 (RPA1)
Transcription factors [BR:
tacu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119939268 (RPA1)
DNA replication proteins [BR:
tacu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119939268 (RPA1)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119939268 (RPA1)
MMR (mismatch excision repair)
119939268 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
119939268 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Por_Secre_tail
Motif
Other DBs
NCBI-GeneID:
119939268
NCBI-ProteinID:
XP_038615102
LinkDB
All DBs
Position
17:53155763..53191332
Genome browser
AA seq
619 aa
AA seq
DB search
MSGRLSEGAIAAIMQQGDSPEKPILQVINIRAISTGNGPNRYRLLMSDGLNTLSSFMLAT
QLNSLVEEERLSTNCICQINRFIVNSLKEGRKVIILMDLDVLKLAEEVGAKIGNPVPYNE
GTGQQQTTPAPGPTAIPPASKPQQQNGSSGLGSAGTKSYGPAKSFAKTGSSNLLSTPGGS
HSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFND
QADKFFPLIEVNKVYYFSKGSLKIANKQFTAVKNDYEMTFNNETSVVPCEDAHHLPTVQF
DFTGIGDLENKSKDSLVDIIGICKSYEEANKITVKSNNREVSKRNIHLMDMSGKLVTATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIMNPDIPEAFKLRGWFDAEGK
ALDCISISDLRSGGGGGGSNTNWKTLYEVKAENLGHGDKAEYFSCVGTVVYLRKENCMYQ
ACPSQDCNKKVIDQQNGLYRCEKCNCEFPNFKYRMILSANIADFQENQWVTCFQESAEAI
LGQNTMFLGELKEKNEQAFEEVFQNANFRSYVFRIRVKLETYNDESRIKASVMDVKPVDH
CEYGKRLIANIRRNAAQMM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcggctgagcgagggggccattgcggccatcatgcaacagggagattctcct
gaaaaacctattctccaagtcattaacatccgggccatatctacaggaaatggtcccaac
cgttaccgactcctcatgagtgatggattgaacactctctcctctttcatgttggcaacc
cagttgaactctctggttgaagaagaacgcctgtccacgaactgcatctgccagattaac
cggttcatcgtgaactctctgaaagaaggaaggaaagtgattatattgatggatttggat
gttctgaaacttgccgaagaagttggagcgaagattggcaacccggtgccatacaatgaa
gggactggacaacagcagacaactccagctccaggccctactgccattccaccagccagc
aagcctcagcagcagaacggaagctcaggattgggttcagctggaacaaagagctatggg
cctgcaaagtcattcgctaaaactggaagcagtaatttattgagtacgcctggtggatct
cattccaaagtggtccccatagccagtctcactccataccagtccaagtggaccatttgt
gctcgagttactaataaaagtcagatccgcacctggagcaactcccggggggaaggcaag
ctattctcgatagagttggttgatgaaagtggggagattagagctactgctttcaacgat
caagctgacaagtttttccctcttattgaagtgaacaaggtgtactatttctccaaaggc
agcctgaaaattgctaataagcaatttacagccgttaaaaacgactacgagatgactttc
aataacgagacttcggtcgtgccctgcgaagatgcccaccatttacccacagttcagttt
gacttcactgggattggtgacctggaaaacaaatctaaagactcccttgtagacatcatc
ggcatctgcaagagctatgaggaggccaataaaatcacagtaaagtcaaacaacagggaa
gtgtccaagaggaacatccacttgatggacatgtccgggaagttggtgactgctactctg
tggggggatgatgcggacaaatttgatggttctaggcaaccggtgatggctatcaaagga
gccagagtctctgactttggagggcggagcctctccgtcctatcttcgagcaccgtcatc
atgaaccctgatattccggaagcctttaagcttcgaggatggtttgacgcggaaggaaag
gctctagattgcatttcaatctccgatctgaggagcggaggaggcggtgggggaagtaat
accaactggaagactttgtatgaggttaaagctgagaacctgggccatggtgataaggct
gaatattttagctgtgtgggcacagtggtgtacctgcgcaaagagaactgcatgtaccag
gcctgtccctctcaagactgcaataagaaagtgatagaccagcagaatgggctgtaccgc
tgtgagaagtgcaattgtgaatttcccaacttcaagtaccgcatgatcttgtcggccaac
attgccgattttcaagagaaccagtgggtgacttgtttccaggagtctgccgaagccatc
ttggggcaaaatactatgtttctgggagagttgaaagagaagaatgagcaggcgtttgaa
gaagtgtttcagaatgccaacttccgttcttacgtgttcaggatccgggtcaagctggag
acttacaatgacgagtctcgaataaaggcgtcggtcatggacgtgaagcccgtggaccac
tgcgaatacgggaagcggttgatcgcgaatatcaggagaaacgcggcgcagatgatgtga
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