Tachyglossus aculeatus (Australian echidna): 119939568
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Entry
119939568 CDS
T10703
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03410
Base excision repair
Brite
Enzymes [BR:
tacu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119939568 (LIG3)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119939568 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119939568
NCBI-ProteinID:
XP_038615595
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Position
17:56488282..56514560
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AA seq
933 aa
AA seq
DB search
MRRAFPALLLLVVRPTARGSPGAMAEQRYCVDYAKRGTAGCKKCKDKIAKGACRIGKVVP
NPFSESGGDMKEWYHVGCVFEKLERARAATKKIEDLTELEGWEELRGPEREHIQRLVAGL
ASKVAGTPKKKAATVQAKLTASGGVVSPQKGVAPVTNSNPRKFSGFTAKPGPAPAGPAGS
DAPGLSAQRCDATHKDCLLREFRKLCAMVADKPSYNAKTQIIQQFLQKGAGGDGFHGDMY
LTVKLLLPGVIKSVYNLNDKQIVKLFSRIFQCSQEDMLRDLEQGDVSETVRIFFEQSRAF
PPAAKSLLTLQEVDAGLQQLSRLTKEDDQQTLLRDLASRCTANDLKCIVRLIKHDLKMNS
GAKHVLDALDPNAYEAFKASRDLRDVVERVLHNQQEAEKGPGLRRTLSVQASLLTPVQPM
LAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKSGDRFSYFSRSLKPVLPHKVAHFKDY
IPQAFPGGQSMILDAEVLLIDTNTGKPLPFGTLGVHKKAAFQDAKVCLFVFDCIYFNDVS
LMDRPLRERRRFLQDNMVEIPNRILFSEMKHVTRASDLADMINRVIREGLEGLVLKDVKS
TYEPGKRHWLKVKKDYLNQGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDPQAQRWC
TVTKCAGGHDDATLARLQTELDVVKISKDPAKIPAWLKINKIYYPDFIVPDPKKAPVWEI
TGAEFSRSEAHTADGISIRFPRCTRIRDDKDWESATNLQQLKELYQLSKEKADFTVTAPE
DGGSGSGGEGDSGPSPPPRAAETAAGEPPVRTQKTARRPGPARSREGAAVKSSAKAAPEP
RGEKRKAPEDEEGGVETLLDIFTGVRLYLPLSTPDFGRLRRYFVAYDGDLVREADAASAT
HAVGAGDGSPGARRVSPEWIWACVRQRRLVAPR
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgggcgttcccggccctcctcctcctcgtcgtccggccgacggcccgcggcagc
cccggcgccatggcggagcagcgctactgcgtggactacgccaagcggggcacggccggc
tgcaagaagtgcaaggacaagatcgccaagggcgcctgccgcatcggcaaggtggtgccc
aaccccttctccgagtcgggcggggacatgaaggagtggtaccacgtcgggtgcgtcttc
gagaagctggagcgcgcccgggccgccaccaagaagatcgaggacctgacggagctggag
ggctgggaggagctgcgcgggcccgagagggagcacatccagcggctggtcgcaggtctc
gcctccaaggtcgcgggcacccccaaaaagaaggcggccacggtccaggccaagctgacg
gcctccggcggggtggtgtccccgcagaagggagtcgcccccgtgaccaacagcaacccc
cgcaagttctccggctttacagccaagcccggcccggcgcccgccggcccggccggctcg
gatgcccccggcctgtcggcccagcgctgcgacgccacccacaaggactgcctgctgcgc
gagttccgcaagctgtgcgccatggtggccgacaagcccagctacaacgccaagacgcag
atcatccagcagttcctgcagaagggggcgggcggagacggattccacggcgacatgtac
ctgacggtgaagctcttactgccgggcgtcatcaagagcgtttacaacctgaacgacaag
cagatcgtgaagctgttcagccgcattttccagtgcagccaggaggacatgctgcgcgac
ctggagcagggagacgtctcggagacggtgcgcatcttcttcgagcagagccgcgccttc
ccgccggcggccaagagcctcctgacgctgcaggaggtggacgcggggctgcagcagctg
tccaggctgaccaaggaggatgaccagcagaccctgctgagggacctcgcctccaggtgc
acggccaacgacctcaaatgcatcgtgcggctcatcaaacacgacctgaagatgaactcg
ggggcgaagcacgtgctggacgccctggaccccaacgcctacgaggccttcaaggcgtcc
cgcgacctccgcgacgtggtggagcgcgtcctgcacaaccaacaggaggccgagaagggg
ccgggcctccggcggaccctcagcgtgcaggcctcgctcctcacccccgtgcagcccatg
ctggccgaggcttgcaagtccatcgagtacgccatgaagaagtgccccaacggcatgtac
tcggagatcaaatacgatggcgagcgcgtccaggtgcacaagagcggcgaccgcttcagc
tacttcagccgcagcctcaagcccgtcctccctcacaaggtggcccacttcaaggactac
atcccccaggccttccccgggggccaaagcatgatcctcgatgccgaagtcctgctcatc
gacaccaacacgggcaagcccctgcccttcggcaccctcggggtgcacaagaaagccgcc
ttccaggacgccaaagtgtgcctgtttgtgtttgactgcatctacttcaatgacgtcagc
ttgatggacagacccctgcgagagcggcggagattcctccaagacaacatggtggagatc
cccaaccgcatcctcttctcggaaatgaagcacgtcacgagagcgtcggacctggccgac
atgatcaacagagtcatccgggaggggctggaggggctcgtgctcaaggacgtcaagagc
acgtacgagcccggaaagcggcactggctgaaagtgaagaaggactatctgaaccagggc
gccatggccgacacggccgacctggtggtcctcggcgccttctacggccagggcaataaa
ggcggcatgatgtccatcttcctcatgggctgctacgacccccaggcccagcgatggtgc
acggtcaccaagtgcgccgggggccacgacgacgccaccctcgcccgcctccagacggag
ctggacgtggtcaagatcagcaaggaccccgctaagatccccgcctggctgaagatcaac
aagatctactaccccgacttcatcgttcccgatcccaagaaagcacccgtgtgggagatc
accggcgccgagttctccaggtcggaagcccacacggccgacggcatctccatccgcttc
ccgcgctgcacccgcatccgcgacgacaaggattgggagtcggccaccaacctccagcaa
ctcaaggagctgtaccagctctccaaggagaaggccgacttcaccgtaacggccccggag
gacggcggctcgggcagcggcggggagggggattcgggaccctccccgcccccccgggcc
gccgagacggcggctggcgagccccccgtccggacccagaaaactgccaggagaccgggc
cccgcccggagcagagagggcgccgccgtgaaatcctccgccaaggcggcgccggaaccg
cgaggggagaagcgaaaagcccccgaggacgaggaaggtggggtcgagacgttactggac
atcttcacgggggtccggctctacttgcccctgtccaccccggacttcggacggctccgg
cgctacttcgtggcctacgacggggacctggtccgggaggcggacgcggcgtcggccacg
cacgcggtgggcgccggggacgggagccccggggcccggcgcgtctctcccgagtggatc
tgggcctgcgtccgccagcgcaggctggtggccccccgctga
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