Tachyglossus aculeatus (Australian echidna): 119940342
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Entry
119940342 CDS
T10703
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119940342 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tacu03041
]
119940342 (PRPF38A)
Spliceosome [BR:
tacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119940342 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
119940342
NCBI-ProteinID:
XP_038616492
LinkDB
All DBs
Position
18:40747534..40762904
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLETR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRSYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERYRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggtgaaggatgcccacagcatccacggcaccaacccgcagtacctg
gtggagaagattatccgcacccgcatatacgagtccaagtactggaaggaggagtgcttc
ggcctcacggcggagctggtggtggacaaagccatggagctccggttcgtgggcggagtg
tacggcggcaacatcaagcccacgcccttcctctgcctgaccctgaagatgctgcagatc
cagcctgagaaggacatcatcgtggagttcatcaaaaacgaggacttcaaatacgtgcgc
atgctgggggctctgtacatgaggctgacgggcaccgccatcgactgctacaagtacctg
gagcccctctacaacgactaccgcaagatcaagagccagaaccggaacggggagttcgag
ctgatgcacgtggacgaattcatcgacgagctgctgcacagcgagcgcgtctgcgacatc
atcctgccccggctacagaaacgctacgtcctggaggaggccgaacagctggagacccgg
gtcagcgccctggaggaggacatggacgacgtggagtctagtgaagaggaggaggaggag
gacgagaagctggagcgagccccctccccggaccaccgccgcagaagttaccgagacctg
gacaagccgcgacgctcccccgccctgcgctacaggaggagccggagccggtccccgaga
cggcgcagccgatcccccaagaggagaagcccttccccccgccgggaaagataccggagc
aagagcccgcggcggcaccgcagcaggtcccgggagcgacggcaccgatcccgatccaag
tccccaggacaccaccggagtcaccggcacaggagccactcaaagtccccagaaaggtct
aagaagagccacaagaagagtcggcgagggaacgagtga
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