Tachyglossus aculeatus (Australian echidna): 119940580
Help
Entry
119940580 CDS
T10703
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119940580 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tacu03041
]
119940580 (CDC40)
Spliceosome [BR:
tacu03041
]
Complex C
Other components
Step II factors
119940580 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
119940580
NCBI-ProteinID:
XP_038616677
LinkDB
All DBs
Position
19:25739819..25779684
Genome browser
AA seq
591 aa
AA seq
DB search
MSFAIAALAASYGSGSGSDSDGQEEEDDEEEEEEEEGDRHHRRRHRHPQPQPRPRPAGLP
IRAPVVDSAPEVAVREDVETGVHLDPAIKEVQYNPSYETMFAPEFGPENPFRTQQMSAPR
NMLSGYAEPTHINDFMFEQQRRTFATYGYALDPSLDNHQVATKYIGSVEEAEKNQGLTVF
ETGQKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK
HEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSPVPPEKCYLPKKQIHVWSGHT
KGVSAVRLFPLSGHLLLSSSMDCKMKLWEVYGDRRCLRTFIGHSKAVRDICFNGAGTQFL
SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG
EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVT
LSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDA
DGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgccatcgcggccctggccgcctcctacgggtccggctcgggctccgactcg
gacgggcaggaggaggaggacgacgaggaggaggaggaggaggaggaaggggaccgacat
caccgccgccgtcatcgtcacccccagccccagccccggccccggcccgccggcctcccc
atccgcgcccccgtcgtggactccgccccggaggtggccgtcagggaggatgtggagacg
ggagttcatcttgaccctgccatcaaggaagttcagtacaatccctcctatgagacgatg
tttgctcctgaatttgggcccgaaaacccattcaggactcagcagatgtcagctcctaga
aacatgctctccggctacgccgaaccaactcacatcaacgatttcatgttcgaacagcag
aggaggactttcgcaacctacggttatgccttggacccttcgctagataatcaccaagtt
gctaccaagtatatcggctccgtagaagaagctgaaaaaaaccaaggtttaaccgtgttt
gaaaccggacagaagaagaccgaaaagaggaaaaagttcaaagaaaatgatgcctcaaat
attgatggtttcttgggaccctgggctaaatacgtggatgaaaaagatgtggccaaacct
tcggaagaagagcagaaagagttagatgaaataacagccaagaggcagaagaaaggcaaa
cacgaagatgacaaacctggagaggagaagactatcttacatgttaaagaaatgtatgac
taccagggaagatcctatcttcatgttcctcaggatgtcggcgttaacttacgttctcca
gtacctccggagaaatgctatcttcccaaaaagcagatccacgtgtggtctggacatacc
aaaggcgtcagcgcggtcaggctgtttcccctctctggtcatttattgctgtcctcctcg
atggactgtaaaatgaagctgtgggaagtttatggggatcgccgctgtttgagaacattt
atcggacatagcaaagccgtcagagatatctgctttaacggtgctgggactcagttcctc
agtgccgcttatgataggtatctcaagctgtgggacacagaaacagggcagtgtatttca
agatttaccaatcgcaaagttccctactgcgtcaagttcaatccggacgaagacaaacaa
aatctctttgttgccgggatgtccgacaagaagatcgtacaatgggacattcgcagtggg
gaaattgtgcaggaatacgaccggcatttgggggctgtcaacactatcgtcttcgtggat
gagaatcgacggttcgtgagtacgtctgatgacaagagtctcagagtctgggaatgggac
attcccgttgattttaaatacatcgcagaacctagcatgcattcgatgcccgccgtgact
ctgtcacccaacggaaaatggttggcctgtcagtcaatggataatcagattttgattttt
ggagctcagaacagattccgcttaaataagaagaaaatctttaagggtcacatggtggca
ggctacgcttgccaggtggatttttccccagatatgagctacgtgatatccggcgacgcg
gatgggaaactgaacatctgggactggaagacgacgaagctgtacagccgattcaaagct
cacgacaaagtgtgcataggggccgtgtggcacccccacgaaacctccaaggtgataacg
tgcggctgggacggcctcattaaactgtgggactaa
DBGET
integrated database retrieval system
