Tachyglossus aculeatus (Australian echidna): 119941380
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Entry
119941380 CDS
T10703
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tacu03037
]
119941380 (IFT88)
Cilium and associated proteins [BR:
tacu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119941380 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_14
TPR_19
TPR_16
TPR_6
TPR_11
ANAPC3
TPR_17
ARM_TT21_4th
TPR_9
TPR_CcmH_CycH
TPR_10
ARM_TT21_5th
TPR-S
HAT_PRP39_C
ARM_TT21_C
ARM_TT21_2nd
TPR_15
DUF6584
NBD_SMAX1
MIT
Motif
Other DBs
NCBI-GeneID:
119941380
NCBI-ProteinID:
XP_038617719
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Position
20:464391..508388
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AA seq
827 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPTYDTEDLENDAAFQQAVKTSHGRRPPVTAKIPITA
AVRPLATGFASKTTTLSSSMGRPVTGAVQDGVARPMTAVRAAGFTKAAVRGSAFDPLGQS
RGPAPPLETKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLV
RQREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNM
GNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKILQNIGVTFVKTGQYSDAINSFEHIM
GMAPNLKAGFNLILSYYAVGDRERMKKAFQKLIAVPLEIDEDDKFISPSDDSHANLLIEA
IKNDNLRQMEHERKALAEKYIMTAAKLIAPAIETSFAVGYDWCVEVVKASQYVELANDLE
INKAITFLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYYLENEFTQADNYADL
AVSSDRYNPSALTNKGNTIFVSGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLD
EALDCFLKLHAILRNSAQVLYQIANLYEIMEDPNQAIEWLMQLISVVPTDARALAKLGEL
YDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVK
WQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDIGLKEVQEYATKLKR
VEKMKEMREQRVKSGRDSSGRGKREGSAGSDSGQSSGASSRGERLSAKLRSLPGANEPYE
SSSNKEIDVSYVDPLGPQTERPKTAAKKKMEEDDFADEELGDDLLPE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaacgtccacctcgccccggaaacggatgaagatgacctttattccggctat
aatgactataacccgacttacgatactgaggacttggagaatgacgcagcttttcaacag
gctgtgaagactagccatggcagacgacctccagtcacagccaaaattcccatcactgca
gcagttcgacctctagctactgggtttgcgtccaagacaacaaccctgtcatcatcaatg
gggaggccagtgacaggagctgtacaggatggggttgctcgacctatgacagcagtgaga
gcagctggtttcactaaagcagctgtgagaggttctgcatttgacccccttggtcagtcg
cgaggccctgctcctcctttggaaaccaaaaatgaggatagtccagaagaaaaaattcga
cagttggaaaaaaaggtgaatgaattagtagaagaaagctgtattgccaacagctgtgga
gacctaaaattggcattggaaaaggcaaaagatgcaggaaggaaggagagagtcctggtg
agacaacgagaacaagtgacaacaccagaaaacatcaatttagacttaacctattcagtt
ctttttaacttggccagtcagtactcagctaatgaaatgtacgctgaagcactaaacacc
taccaagttattgtgaaaaataagatgttcagcaatgcagggagactgaaggtgaatatg
ggaaatatttatttaaaacaaagaaattattccaaagctatcaagttctatcggatggct
ctggaccagatcccaagtgtccataaagaaatgaggattaaaatcttgcaaaatattggt
gtgaccttcgttaaaactggccaatattcagatgctatcaattcttttgagcacataatg
ggtatggccccaaatctgaaagcaggcttcaacttgatactgagctactatgcagttggg
gaccgagaaagaatgaagaaagctttccagaaattgattgctgttccattggaaattgat
gaggatgacaaattcatttcaccaagtgatgactcgcacgctaatctattgattgaagcc
attaaaaatgataacctaaggcaaatggagcatgaaagaaaagccctagcagagaaatac
atcatgacggccgccaaactcattgctcccgcaattgaaacatcatttgccgtaggctat
gactggtgtgttgaagtagtaaaggcttctcagtatgtagaactagctaacgacttggaa
ataaacaaagcaattaccttcttgaggcaaaaggactttaaccaatatgaagaggctgta
gagactttaaaaatgtttgaaaagaaggacagtagagtaaaaagtgcagctgcaacaaat
ctttcatttctttactatttggagaatgagtttacgcaagccgacaactatgcagacttg
gctgtgagttctgatcgatataacccgtcagcactcactaataaaggaaataccattttt
gtcagtggagattatgagaaagcagccgagttttataaggaagctctgagaaatgattct
tcctgcactgaagcactttacaatatcggtttaacatataagaagttaaacagactagac
gaggctttggattgtttcctgaaacttcatgcaatcctacgaaacagtgctcaagtcctt
taccaaatagcaaacctatatgaaataatggaagatcccaaccaggccatagagtggctg
atgcagctgatcagtgttgtcccaacagatgctcgtgccttagccaaactaggagaattg
tatgacaacgaaggggacaaatcccaggcatttcagtactactatgagtcctatcggtac
ttaccttctaacattgaagtcattgaatggcttggagcttactacattgacacccagttt
tgtgaaaaagccattcagtactttgaaagagctgctcttattcgtcccacccaagtgaaa
tggcagctgatggtggctagttgttacagaagaagtggtaactaccaaaaagctctggat
acctataaggagatccataaaaaatttccagaaaatgttgaatgtctgcggttcttagtt
cggctctgcacagatattggactaaaagaagttcaggagtatgcaaccaaactcaagaga
gtggaaaaaatgaaagaaatgagggaacagcgggtgaagtctggcagagacagcagtggt
cgtggcaagagagagggcagtgctgggagtgacagtggccagagctctggggccagtagt
agaggagagcgacttagtgccaaactgagatccttgcctggcgccaatgaaccgtatgaa
agcagcagcaacaaagaaatagatgtctcatatgtggatccactgggcccccaaacagaa
agacccaagacggcagcaaagaagaaaatggaagaggatgattttgctgatgaagaactg
ggagatgacttgcttccagagtga
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