Tachyglossus aculeatus (Australian echidna): 119941426
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Entry
119941426 CDS
T10703
Symbol
SOX1
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tacu03000
]
119941426 (SOX1)
Transcription factors [BR:
tacu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119941426 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119941426
NCBI-ProteinID:
XP_038617784
LinkDB
All DBs
Position
20:13381213..13383516
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AA seq
389 aa
AA seq
DB search
MYSMMMEADLHSPGGVQGPTALSGPPGPGGGGGGGGGGGGGGGGGGGGPKASQDRVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEH
PDYKYRPRRKTKTLLKKDKYSLAGGLLAAGGGGGGGGPRLDSPGPAVGGGGGGGAAAAGG
GTYAHVNGWANGAYPGSVAAAMMQEAQLAYSQPPPPPPPPPPPPPPPPPPPVHRYDMGAL
QYSPLPSSQGYLGGXPPGYGGLPYGPAAAAAAAAAAAAAAAAAASSSGGPHQSAAAAASG
ALGALGSLVKAEPSVSPPGAAAAAHGRAPCPGDLREMISMYLPAGDANDPAAAAAVAAVA
AAQGRLHPLPQHYQSAGPGVNGTVPLTHI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaagcggacttgcactcgcccggcggcgtccaggggcccacg
gccctatcgggcccgccggggccggggggcggcggcggaggaggaggcggcggcggcgga
ggaggaggaggaggagggggcggcccgaaggccagccaggaccgggtcaagcggcccatg
aacgccttcatggtctggtcccgcggccagcggcgcaagatggcccaggagaaccccaag
atgcacaactcggagatcagcaagcggctgggggccgagtggaaggtcatgtcggaggcg
gagaagcggcccttcatcgacgaggccaagcggctgcgggcgctgcacatgaaggagcat
ccggattacaaataccggccgcggcggaagaccaagaccctgctgaagaaggacaagtac
tcgctggccggggggctgctggccgcggggggcggcgggggcggcggaggcccgcggctg
gacagtcccggccccgcggtgggcggcggcggcggcggcggggcggcggcggcgggcggc
gggacttacgcgcacgtcaacggctgggccaacggcgcctacccgggctcggtggcggcg
gcgatgatgcaggaggcccagctggcctacagccagccgcccccgccgccgccgccgccg
ccccctccgccgccccctcccccgccgcccccggtgcaccgctacgacatgggcgcgctg
cagtacagccccctccccagctcgcagggctacctgggcgggtagccgccgggctacggg
gggctgccttacggtcccgccgccgccgccgccgccgccgccgctgccgccgccgccgcc
gccgccgccgcctcctcgtccgggggtcctcaccagtccgccgccgccgccgcctccggg
gccctgggcgccctgggctcgctggtcaaggcggagcccagcgtcagcccccccggggcc
gccgccgccgcccacggccgcgccccctgcccgggcgacctgcgggagatgatcagcatg
tacttgcccgcgggcgacgccaacgacccggcggccgcggccgcggtggcggcggtggcc
gcggcccagggccgcctccacccgctgccgcaacactaccagtccgccgggcccggcgtc
aacggcaccgtgcccctcactcacatctaa
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