Tachyglossus aculeatus (Australian echidna): 119942240
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Entry
119942240 CDS
T10703
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119942240 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tacu04121
]
119942240 (SLX4)
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119942240 (SLX4)
Ubiquitin system [BR:
tacu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
119942240 (SLX4)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119942240 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
119942240
NCBI-ProteinID:
XP_038618837
LinkDB
All DBs
Position
21:complement(52767921..52800239)
Genome browser
AA seq
1859 aa
AA seq
DB search
MEESDDDFKELWSNLPRVRKKEAKEWEGGTRTQKEKSSVQPKSRLRRTKVSDKSGVGKDS
RGKTVVFQQKPSKGDQALGNGEPKEATSHASENTPVPDGKGDVPSTAQRELGPQGSEQDN
LTVATINGHAHEAATHSAVVVPPQPATIRPRAAELVLQRMQRFKRADPERLKHTPGDYSA
AEAVFEAHGPDIGQADPLENEKGPGLSTMESDAALALALQREFGQERPSENSDSLEQKGL
FFCQICQKDLSAMNATRREQHVNRCLDDAEKSPEATSNSPRVPDCPICGKLFVSFKSRTN
HMKRCAVKMEVPPQVLLQAVRLQALESDSCPPALRNPDGRAKRKGSTKEREPHKRRKTSK
TEVMSEDLLVAMAMSRSLLEEAKTVLNVKMESGLPDKIKPGAEKKSRKKQPGPPPPLLVQ
DPATTLRQIQDRVAGLFTEEVELSSTPPLRESRILDEEMGRADWCLPQPQRKHLWEGSAL
SGDWALEAFYAAGLVPPILPWQPLKSLKEEPILPLVATDKLKLPAASEGFGSQTSDEPIV
KSQSSSCSRDHQVFQDLVDLAGEGLTLTQWNLPGSGEPSGKDLMSDDIPLTGFVASPREK
QHQESSSDLLVLSSLASDLGAMINNPHLSDVQFQVDCGEVLYAHMFVLYARCPCLVQIIH
SEGFLVEEDGDLRSRRVLLNEVTSEAVLAFLRYLYAADTSVPPHLLSDLASLAVRFGVSE
LVDICERGPKSMGAESEGDVFCLENEDETCETRADHFQELLRSMWVEEEEEGGISSKPED
REEEDAETINEDEMEEIYEFAATQRKILRGQSGPEEVIRSETEEGEEAEQPGEEKIQVSE
CLRASNQVKEVNLDRVESPRLIKENQDCTVGDSLNAEQFTLSSQGKPCNGGDCGRPPGND
TSVKATEEEDDSSSSEIAWEGKAGGPGELPSPHLTPDAELENSYVRLFSVTQGEYNEPSQ
TNSDPEKPKESVAPQKSEACNSPDSRQSSSPEPEFLLSKSNCVKSSPVKSPLPPLPQITS
SPLFPTLKRLFSSVASQIQLSPGPAARRKKSNSFLTQCDDLVQQNESDRTHTSGCQITQS
LTSPVKSLSIDLTEPKSVSRQSPLVTRSQNSTTRANQDDDIILLLDSDEETEQEETHVQA
LPAGFPGEKEMPQSLMGNLKMKDDPDSSGPLSAFDTDENRRRSSCSVRGASGVLRDGVSG
ILRASQSNGQKDGWMDGKLNLVSPELERTHEASSSTDTSWLIPATPVANRSRECSVQTQI
TSVRSRSRASTLMARDHPQRTETSVGNGCGKEATKDLSVRSPQTASRLLSVISKISPLSE
DCGSKGQPSASSSNHYSEDQKSTSPVASSPSSCERAGLVGEPLNDPPSPQARLSHAEETL
PVAHGEVVEVEDSEEEEEAAPSLPNASLFLDNDPPVPVDDDCWAVDCFSPVPLDSLDPKR
IGPLKTSSPSGRIRGASDDRQSSSPRSPKGADSTPLCGNPADRKNPMPRGEERALPSGSP
EDSRGSLLNSAIWEDWNGEDEDLPVVLPLSQRLLGAEPPRETEVLKTPKVTDPKKNLPPK
VPITPMPRYSIMETPKLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQILESDSEEEVPSS
QVPPQKVPAGPCCLSQTSPCTLDQEDPYAASSSSSLPSLENGCPQAAGDSSRASQQRLRN
TTKTRGSRVAEKQPSPAILPPPKSPAKEVLPDPEEDGQPSASQSSSASSGAENDSSFGSQ
SSSTSEFGAGYVSEGEEEVAAEDITASQAALLEADKEEAVRRYIRSSPALYRKILLYQPL
ELGELQAELKQNGIKLAAGKLLDFLDTQGITFTTARARKEKLEKKQRRNPGAKKRGRRY
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggatgacgattttaaagagctctggtccaaccttccaagggtgaggaag
aaggaggccaaagaatgggagggagggacaaggactcaaaaagaaaaaagcagtgtccag
ccaaaaagccgactgagaaggaccaaagtctctgataaaagcggtgttggcaaagactcc
agagggaagacggttgtcttccagcagaaaccaagcaagggagaccaggccctggggaat
ggagagccaaaggaagccacttcccacgcaagtgaaaacactccagttcccgatggaaag
ggagatgtgccgtctactgctcagagagagttggggccacagggtagcgaacaagacaac
ttgacagtggctacgataaatggccatgcccacgaagcagccacccattcagctgtggtg
gttccaccgcagccagctaccatccgaccccgagcagcagagctggtcctgcagagaatg
cagcgctttaagagagcagatccggagcggctgaaacacactcctggagattactctgct
gcggaggctgtatttgaagcccacggcccagacattggccaagcagatcccttggaaaat
gagaaaggacccggactttcgaccatggagagcgatgccgctctggctttggctctgcag
cgagagtttggacaggaaagaccttcggagaattcagacagcctggagcagaagggcttg
tttttctgtcagatctgtcagaaggatctctctgctatgaatgccacgcggagggagcag
catgtgaacaggtgcctggatgacgcagagaagtccccggaggccacttctaactctcca
cgggtccccgactgcccaatctgtggcaagctgtttgtatccttcaagagccggaccaac
catatgaaacgttgtgcagtcaaaatggaggttcccccgcaagtcctcctccaggccgtc
cgactgcaggccttggaatctgacagctgcccgccagccctgagaaatccagatggcaga
gcaaagcggaaggggtcaaccaaggagagagagccccacaagaggcggaagacatccaag
acggaagtcatgtcagaggacctcttggtagccatggcaatgtcgcgttcactgctggag
gaagccaagactgtactgaatgttaaaatggaaagtggtcttccagacaaaatcaagcca
ggagcagaaaagaaaagtcgtaagaaacaacccgggcctccacctccactattagttcag
gacccagcaacaaccctaagacagatacaggatcgtgtcgctgggttgttcactgaggaa
gtggaactatccagtactcctccactacgcgagagcagaattttggacgaagagatgggt
agagcagattggtgtctgccccagccccaaagaaagcatctctgggaaggcagcgctttg
agcggagactgggccttggaggctttttatgctgcaggattagttcctcccattcttcct
tggcagcccctgaagagtcttaaagaggagcccatcttgccattagtggcgaccgacaag
ctcaagcttcctgctgcttccgagggcttcggatcccaaacgtctgacgagcctatcgtc
aaaagtcagtcgtcctcctgcagccgggatcaccaggttttccaggacctggtggatctg
gcaggggagggactgacccttactcagtggaaccttcctggttctggggaaccctcaggg
aaagatctgatgtctgatgacatcccattgactggatttgtcgcctcacccagagagaag
cagcatcaggaaagcagcagcgatttactcgtacttagttcgctggcttctgacttgggt
gcaatgatcaataacccccacctgagcgacgtccagttccaggtggactgcggtgaagtc
ctctatgcccacatgtttgtgctgtatgctcgctgtccttgtcttgttcaaattattcac
agcgaaggcttcttggttgaggaagatggggatttgcgaagtcggcgggtcctgctgaat
gaagtgaccagcgaagcagttcttgctttcctgcggtatctctacgctgctgacacctcc
gttcctccccacctgctttctgatttggcttctctagctgtcaggtttggtgtgagtgaa
cttgttgatatatgtgaaaggggtcccaagtctatgggtgccgagtcagagggggatgtg
ttttgtttggaaaacgaagacgagacttgcgaaaccagagccgaccatttccaagaactc
ttaaggtcaatgtgggtagaggaagaggaggaaggcggaatttcatcgaaacctgaagat
cgggaagaggaagatgccgaaacgataaatgaggatgaaatggaagaaatttacgaattt
gctgccactcagcgaaagatcctgcggggtcagagtggtccagaagaagtcatcagaagt
gagacagaagaaggtgaagaggctgagcagccaggagaggaaaagattcaggtctccgag
tgtctgcgagcaagcaaccaagtgaaagaagtaaacttggatcgtgttgagtcaccaaga
ctgataaaggaaaaccaggattgtactgtaggtgacagcttaaacgctgaacaattcact
ttgtctagtcagggtaaaccttgcaatggtggggattgtggaaggccccctggaaatgat
acttcagtcaaggcaactgaggaggaggatgactcaagctcatctgaaattgcctgggaa
ggcaaggcaggtggccctggggaactaccctccccacatttgacccctgatgctgagctt
gagaacagctatgttcgtctgttctcggtgacccaaggagaatacaatgaaccttcccaa
accaacagtgatccggaaaagccaaaggagtcagttgccccgcaaaagtccgaagcttgt
aattcacccgacagccgtcaatcctcatcaccggagccagaatttctactgtctaagagt
aactgtgttaaaagttctcctgtcaagtctcctctccctcctctacctcagatcacttca
tcccctttatttcctacattaaaaagactgttctctagcgtagcttcccaaatccaactt
tctccaggtccagcagcaaggcgcaagaaaagtaacagttttctcacccagtgtgatgac
ttggtccagcagaatgagagtgaccgtacccacacatcaggatgtcagattacccagtca
ctgacttctccagtaaagtcactgtccattgacctaactgaaccaaaatccgtttcaagg
cagtccccactggtcaccaggtctcagaattctacaaccagagcgaaccaggatgatgac
attatcctgctgttggattccgatgaagaaacagagcaagaagaaacccacgtgcaagct
ctccctgccggtttcccgggagaaaaggaaatgccccagtctctgatgggtaacctaaag
atgaaagatgatccggattcatctggaccactttcagcttttgataccgatgagaaccgc
agacgctcttcatgctccgtgcgaggtgcatctggggtgctcagagatggcgtttcgggg
attttgagagccagccagtcgaatgggcagaaagatggctggatggatggcaaactgaat
ctggtgagccctgagcttgaaaggactcatgaggcgagcagttccactgacacctcatgg
ctcataccagccacccccgtggctaacagaagtcgagagtgctcggtccaaacccagatc
acgagcgtcagatccaggtcccgggcttccactctgatggctagagatcacccacaaagg
actgaaacgtcagtcggaaacgggtgtggtaaagaagcgacaaaagacttgtccgtaaga
agtccgcaaacagcgtcccgtctgttatccgtcatttcaaaaatcagcccactctcggaa
gactgtggcagcaaggggcaacctagtgcaagctcttcaaatcactattcagaggaccag
aaatccacttctcctgtggcatcaagtccatcgtcctgtgagagggcgggtttagttggt
gagcctctgaatgacccaccttcacctcaggcaaggctctcgcacgctgaagagaccctg
ccagtggcccacggtgaagtggtagaggtcgaggatagcgaggaagaagaggaagctgcc
ccatctcttccaaacgcgagcttatttctggacaacgaccccccagttcccgttgacgat
gactgctgggcagttgattgtttctccccagttccgttggacagcttggaccctaaaaga
attggccccctgaagaccagtagccccagtggcagaattcgtggtgcttcagatgacagg
cagtcgagttcccccagatctccgaagggagcggacagcactcctttatgtggaaatcct
gctgataggaaaaatcccatgcccaggggggaagagagggccctgccatcaggctcccca
gaggacagccgaggcagcctgttgaattcagccatttgggaggattggaatggagaggat
gaagacttgccagtggtgcttcctctgtcccaaagactgctgggagctgagcctccgcgg
gaaactgaggtgctgaagactccaaaagttactgatcccaagaaaaatttgccccccaaa
gttcccataaccccaatgccaagatattccataatggaaactccgaaactgaagaaagag
cttgacagatttggagtccgtcctctccccaaacgccagatggtcctgaaactgaaggag
atcttccagtacactcatcagatcctggagtctgactcggaagaggaggtcccttcctcc
caagtgcctccgcagaaagttccggctgggccttgctgcctttcccagacttctccatgc
accttggatcaggaggacccctatgcagcttcctccagcagttccctgcccagcctggag
aatggctgcccgcaggcagcaggagactcctccagagccagccagcagaggctcaggaat
accaccaagaccagaggctcccgagttgcagagaaacagccgagcccagcgattctgcca
ccccccaaatctccagccaaggaggtgctccctgaccccgaagaagacggtcagccctct
gcgtcccagagctctagtgcgtcctccggggctgaaaatgactcctcctttggttcgcaa
agttcttccaccagtgagttcggagcaggatatgtgtccgaaggggaggaagaagtagca
gcagaagacatcactgcctcccaggcggctttgctggaggcagacaaggaggaagccgtg
aggcgatacatccggtccagccctgccttgtaccggaagatcctgctttaccagcctttg
gagctgggcgaactgcaggccgagttgaagcagaatggcattaaattggctgcgggaaag
ctgctggactttttggacactcagggcatcacgttcaccacggccagagcccggaaggag
aagctggagaagaagcagcggcggaatcctggggccaagaagaggggaagacggtactga
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integrated database retrieval system
