Tachyglossus aculeatus (Australian echidna): 119943548
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Entry
119943548 CDS
T10703
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119943548 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119943548 (CLP1)
Enzymes [BR:
tacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
119943548 (CLP1)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
119943548 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
119943548
NCBI-ProteinID:
XP_038620529
LinkDB
All DBs
Position
22:33057383..33064803
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AA seq
425 aa
AA seq
DB search
MAEEASDEKKPLAKFELERETELRFEVEASQSAQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENISETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggcgagcgatgagaagaagccgctggccaaattcgagctggagcgggag
acggagttgcgcttcgaggtggaggcctctcagtcggcccagctggagctgctggccggc
atggcggagatcttcggcacggagctgacccgcaacaagaagttcactttcgacgcgggc
gccaaagtggccgtcttcacctggcacggctgctcgctgcagctgagcggccgcacggag
gtggcctacgtctccaaggacaccccgatgctgctctacctcaacacccacacggccctg
gagcagatgcggcggcaggcggagcgcgaagaggagcgggggcccagggtcatggtggtg
ggccccaccgacgtgggcaagtccaccgtgtgccggctgctgctcaactacgccgtccgg
ctgggccggcggcccacttacgtcgagctggacgtgggccagggctccgtctccatcccc
ggcaccatgggcgccctgtacatcgagcggccggccgacgtcgaggagggcttctccatc
caggccccgctcgtctaccacttcggctccaccacccccgggaccaacatcaaactctac
aataagatcacctcccggctggcggacgtcttcaaccagcggtgcgaggtgaatcggcgg
gcgtccgtcagcggctgcgtcatcaacacgtgcggctgggtcaaggggtcgggttaccag
gccctggtgcacgcggcctcggccttcgaggtggacgtggtggtggtgctggaccaggag
cggctgtacaacgagctgaagcgcgacctgcctcacttcgtgcgcaccgtgctgctcccc
aagtcgggcggggtggtggagcggtccaaggacttccggcgggagtgccgggacgagcgc
atccgggagtatttctacgggttccggggctgcttctatccccacgccttcaacgtcaag
ttctccgacgtcaagatctacaaggtgggggcccccaccatccccgattcctgcctgccg
ctgggcatgtcccaggaggacaaccagctgaagctggtcccggtcaccccgggccgggac
atggtgcatcacctgctgagcgtcagcaccgccgagggcaccgaggagaacatctccgag
accagcgtggccggcttcatcgtggtcaccagcgtggacctggagcaccaggtcttcacc
gttctctccccggccccccgccctctgcccaagaactttctgctcatcatggacatccgc
ttcatggatctcaagtag
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