Tachyglossus aculeatus (Australian echidna): 119943720
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Entry
119943720 CDS
T10703
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04120
Ubiquitin mediated proteolysis
tacu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119943720 (SYVN1)
04120 Ubiquitin mediated proteolysis
119943720 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tacu04121
]
119943720 (SYVN1)
Enzymes [BR:
tacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119943720 (SYVN1)
Ubiquitin system [BR:
tacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119943720 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
119943720
NCBI-ProteinID:
XP_038620787
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Position
22:complement(48939606..48958487)
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AA seq
629 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRILSLMVLLAGLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTVFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATAEELQATDNVCIICREEMVS
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAPSQPPPEPPEPGPQAPPQPP
LLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPSNAAAAASPSATGEPDPGGVSGGP
GPPTGARGDLGGPGFPVVTARARPPSAASAPRAGGPAGPEQPPAPGFPFPPPWLSVPLPP
PFGFPPMPVPPAGFAGLTAEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTV
LASLGPPRPPAPPSPTEATVASTSSSGPSSEAATPSSAPSPPPSEPAPPAPHPASGAEPG
AEEAAEDGEPDAEELRRRRLQKLGSPVPH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcggtgatgatggcggccagcctggcgctgaccggggccgtggtggcc
cacgcctattacctcaagcaccagttctacccgaccgtggtgtacctcaccaagtccagc
cccagcatggccgtcctctacatccaggccttcgtcctcgtcttcctcctgggcaaggtg
atgggcaaggtgttcttcgggcagctgcgggccgccgagatggagcacctgctggagcgc
tcctggtacgccgtcaccgagacctgcctggccttcaccgtcttccgggacgacttcagc
ccccgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgggtggactttatggagcgtagccccaacatctcctggctcttccactgccgc
atactctctctcatggtcctgctggcggggctggacttcctgttcgtcagtcacgcgtac
cacagcatcctgacccgcggggcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgatgaccatggtcctcaccgtcttcatcaagtacgtgctgcactccgtcgacctccag
agcgagaacccgtgggacaacaaggccgtgtacatgctgtacacggagctcttcacaggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacacgttc
cccctgtttgccatccggcccatgtacctggccatgaggcagttcaagaaagcggtcacg
gacgccgtcatgtcccgccgggccatccgcaacatgaacaccctgtacccggatgccacc
gcggaggagctccaggccacggacaacgtgtgtatcatctgccgggaggagatggtgtcc
ggagccaagcggctgccctgcaatcacatcttccacaccagctgcctgcgctcctggttc
cagcgccagcagacgtgccccacatgccgcatggacgtcctgcgggcatcgctcccagcc
ccgtcgcagccgccccccgagcccccggagccggggccccaggctcccccgcagcccccg
ctgctgccgcagccccccaacttcccccaaggcctcctgcctcccttccctccgggcatg
ttcccgctgtggcctcccatgggccccttccccccggtgccgccccccagcaacgccgcc
gccgccgccagcccctccgccacgggtgagccagaccccgggggggtgtcgggggggccc
gggccgccgaccggcgccaggggggacttggggggcccggggttccccgtggtgacggcg
cgtgcccgccctccctccgcagccagcgcgccccgagccgggggccccgccggccccgag
cagccccccgcgcccggcttccccttcccgccgccctggctgagcgtcccgctgcccccg
cccttcgggttccccccgatgcccgtgccccctgcgggcttcgcggggctgacggccgag
gagctgcgggccctggagggccacgaacgccagcacctggaggcccggctgcagagcctg
cgcaacatccacaccttgctggacgccgccatgctgcagatcaaccagtacctcacggtg
ctcgcctccctcggccccccgcggcccccggcaccgcccagccccacggaagccaccgtc
gcctccacctcctccagcgggcccagctccgaggcggccaccccgtcctccgccccctcg
cccccgccgtccgagccggcgccgccggccccgcaccccgcgtcgggtgcggagccgggc
gcggaggaggcggcggaagacggagagccggacgcggaggagctccgccgccgtcggctg
cagaagctggggtctcccgtcccccactga
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