Tachyglossus aculeatus (Australian echidna): 119945026
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Entry
119945026 CDS
T10703
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04360
Axon guidance
tacu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119945026 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119945026 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tacu04515
]
119945026 (ROBO1)
Cell adhesion molecules [BR:
tacu04515
]
Immunoglobulin superfamily
ROBO family
119945026 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
119945026
NCBI-ProteinID:
XP_038621961
LinkDB
All DBs
Position
24:19312092..20141462
Genome browser
AA seq
1654 aa
AA seq
DB search
MKWKCFPFFVTVAVLGLSRLAVFQAQLIPDSDDLERGNDNGTPLPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGDRVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPADVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSSLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPIPTLRWRKDDG
ELPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQVVSEPPHFVVKP
RDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITS
VQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPVIRQGPGNQTVAVDGTLALSCV
ATGSPVPTILWRKDGVLISTQDSRIKQLESGVLQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKMETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPFAAS
YGESEWLVFEVRTPTKNSAVIPELKKGVNYEIKARPFFNEFQGADSEVRFAKTLEEAPSA
PPQSVTVTKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTVDGSTFSV
VIPSLVPGIRYSVEVAAGTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIA
NYNNQLENKQTNLMLPESSVYGDVDLSNKMNEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNISNNMNNGSGEANEKHWKPPSQPKQEVAPIQYNIMEQNKLNKDYRVNDPVPPTIP
YNQAYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKLPKQGGMNWADLLPPPPAHPPPHS
NSEDFSLSVDESYDQEVPGPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAAVSYS
HQSTATLTPSPQEELQPMLQECPQEIGHLQHQPDRRRQPGSPPPPPRPISPPHTYGYISG
PLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGS
ASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASH
LPRPTSPVSTDSNMSAAVIQKVRPPKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTVQ
SKTQLEVRSVMLPKLPSIDPRTDRSSERKGGNYKGRDGADGRQHSDVRTNPGDHRDIQEL
QGDGKGRGSKAAKRDVPATKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGGRQ
RDQGNVGRRNVAEMQVLGAYEREDDEEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaatgttttccctttttcgtcacggtagcagtacttggcctgtccagactt
gctgtgtttcaggcacagctcattccagactctgacgacctagagagggggaatgacaac
gggacaccgcttcccacctctgataacgatgacaattcgctgggctatacaggttcccgg
cttcgtcaagaggatttcccacctcgaattgttgagcatccttcagatctcattgtgtcg
aagggagaaccagcaactttgaactgcaaagctgaaggccggccaacaccaactattgag
tggtataaagggggagacagagtggagacggacaaagatgaccctcgttcccaccggatg
ttgctgccaagtggatctttatttttcttacgtatagtccacggacgcaaaagtagaccc
gatgagggggtctatgtctgtgtagcaaggaattacctgggagaagccgtgagccacaac
gcatcgctggaggtagctatattacgcgatgatttcagacaaaaccccgcagatgtaatg
gtggctgtcggagaacctgccgtgatggaatgccaacctccacgaggccatccagaaccc
actatttcgtggaagaaggacggatcgtcactggacgataaagatgaaaggattacgatt
cgtggagggaagcttatgatcacctatacccgaaagagtgatgcaggcaaatatgtttgc
gttggaacgaatatggtgggggaacgagaaagtgaggtggctgaactcaccgttttggag
cgaccatcatttgtgaagagacccagtaatttggctgtaactgtggatgacagtgcagaa
tttaagtgtgaagcccgaggtgaccccatccccacactccgatggcgaaaagatgacggg
gaattgccaaaatctagatatgaaatccgggacgatcacaccctaaaaatccggaaagtg
acggcaggagatatgggatcatacacttgtgttgcagaaaatatggttgggaaagctgaa
gcatcagcaactctcactgtccaagttgtgtctgaacctccacattttgttgtgaaacct
cgggaccaggttgctgccttggggcgcactgtcactttccagtgtgaagcaaccggaaat
cctcagccggctatcttctggaggagagagggaagtcagaacctgcttttttcatatcag
cctccacagtcatccagtcgcttctccgtctcccagactggggatctcaccatcacaagc
gtccagagatctgacgtgggatactatatatgccagaccttaaacgttgcgggaagcatc
acaacgaaagcctatttggaggttactgatgtgattgcagaccgtcctcccccggtcatt
cggcagggtcctgggaatcagacggtagctgtggatggcacgttagccctcagctgtgtg
gcaacgggcagcccggttcccaccatcctctggagaaaggacggggtcctcatttccaca
caggactcccgcatcaagcagctggagtcgggggtattgcagattcgctatgccaagctg
ggtgacaccggtcggtacacctgcatcgcttcaaccccgagtggcgaagctacatggagt
gcgtacattgaagttcaagaatttggagttccagttcagcctccgagacccactgacccg
aatttaatccccagtgccccatcaaagccagaagtcactgatgtcagcagaaatacagta
acattatcctggcaaccaaatttgaattcaggtgcaactccaacatcttatatcatagaa
gccttcagccatgcatctggcagcagctggcagacagtagcagaaaatgtgaaaatggaa
acattcgccattaaaggcctcaagcctaatgcaatttacctcttccttgtgagagctgca
aatgcatatggaattagtgatccgagccagatttcagatccagtgaaaacacaagatgtc
ccaccaacaagccagggagtggatcacaagcaggtgcagcgagaactaggagatgtggtc
ctgcacctccacaaccccacgatcctttcctcctcttcagttgaagttcattggacagtg
gaccagcaatctcagtatattcaggggtataaaattttgtacagaccatttgcagcaagt
tatggagaatcggagtggttggtttttgaagtgaggaccccgaccaaaaacagtgccgtg
ataccagaactgaaaaaaggagttaactatgaaatcaaggcccggcccttctttaatgaa
ttccaaggtgccgatagcgaagtcagatttgccaaaacactggaggaagcacccagtgct
ccgccccagagcgtgactgtgacgaagaatgatgggaacgggactgcaattctggttacc
tggcagccgcccccagaagatacccagaatggaatggtccaggaatataaggtttggtgc
ttaggcaatgagagccgataccatataaacaagacagtggatggctctaccttttctgta
gtcattccatcgctggttccggggatccgttacagtgtggaagtagcagctggaactggt
gcaggacctggagtgaaaagcgaaccccagtttatccagttagattcccatgggaacccg
gtttcaccggaagaccaagttagccttgctcagcagatttcagatgtcgtgaagcagcca
gccttcatagctggcatcggtgcagcctgttggattatccttatggtcttcagcatctgg
ctgtatcgccaccggaaaaagcgaaatggactgaccagtacttatgccgggatccggaaa
gtcccgtcttttaccttcacaccaacagtaacttaccagcgaggaggcgaagctgtgagc
agcggaggcaggccgggacttctcaatatcagcgaacctgccactcagccgtggctggca
gatacttggcctaacactggcaacaatcacaatgactgttctattaactgctgcacagca
gggaacggaaacagcgatagcaatctgactacgtacagtcggccagctgattgtatagcg
aattataacaatcagctggaaaacaagcaaacaaacctgatgcttccagaatcatcggtt
tatggggacgtggacctgagcaacaaaatgaacgagatgaaaaccttcaatagcccaaat
ctgaaggatggacgatttgtcaatccgtcaggacagcccactccctatgccaccactcag
ctcatccagtcaaacatcagcaataacatgaacaatggcagcggggaggcgaatgagaaa
cactggaagccccctagtcaaccaaaacaggaggtggcacccattcagtataacattatg
gagcaaaacaaattaaacaaagattacagagtaaatgaccctgttcccccaactattcct
tacaaccaagcctatgaccagaataccgggggatcctacaacagttcagatcgaggcagt
agtacatctgggagccaagggcacaaaaaaggagcccgaacccccaagttacctaaacaa
ggtggtatgaactgggcagatctgctgccacctcctccagcacatcctcctccacacagc
aacagtgaagatttcagcctttctgtcgacgaaagctacgaccaagaagtcccagggcca
gtgcctccagctaggatgtatttacagcaagacgagctggaagaagaggaagaagatgaa
cggggacctactccaccagtgcgaggagcagcctcctccccggcggccgtgtcctatagt
caccagtctacggccacactaactccttcccctcaagaagagctccaacctatgttacaa
gaatgcccacaagaaattggccatttgcagcaccagccggacagaagacgccagcctggg
agcccacctcccccaccaaggcctatttccccaccgcacacttatggctacatttctggg
ccactggtttcggatatggacaccgatgctccggaagaggaagaggatgaagcggacatg
gaggtggccaagatgcaaaccagaaggctgcttctgcgggggctagagcagacacccgcc
tccagcgtcggagatttggaaagctccgtaacgggctctatgatcaacggctggggttcg
gcctcagaagaggacaacatctcaagcggacggtccagcgttagttcctctgatggttcg
tttttcaccgatgccgattttgcacaggctgtagcagcggcggccgaatacgccggtctg
aaggtagcaagacggcaaatgcaggatgctgcaggtcgcaggcattttcacgcatcgcac
ttacctcggcccacgagccccgtctctacagacagcaatatgagcgctgctgttatacag
aaggtccgaccccccaagaaacagaagcaccagcccggacacttacgcagagaagtctac
acggacgatctgccgccacctccagtgcccccacccgctatcaaatcacccactgtccaa
tccaagacccagctggaggtacgatctgtaatgttgccaaaactcccttcgatagacccg
agaacagacaggtcttcggagagaaaaggaggtaattataaagggagagacggggcagat
gggagacagcactctgatgtgcggacaaatccgggagatcatcgagacatccaggaactc
caaggtgacggaaaagggagaggaagcaaggcagccaaacgagacgttccagcaacaaaa
actcatctcatccaagaagatatcctaccttactgtagacctacatttcccacatcaaat
aatcctagagatcccagttcctccagctcaatgtcatctagaggatccggagggagacag
agggatcaaggaaatgtaggtcgaaggaatgtggccgaaatgcaagtcctgggagcatat
gagagggaagatgatgaagaagaattagaggaaaccgaaagctga
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integrated database retrieval system
