Tachyglossus aculeatus (Australian echidna): 119945026
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Entry
119945026 CDS
T10703
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119945026 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tacu04515
]
119945026 (ROBO1)
Cell adhesion molecules [BR:
tacu04515
]
Immunoglobulin superfamily
ROBO family
119945026 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
119945026
NCBI-ProteinID:
XP_038621961
LinkDB
All DBs
Position
24:19312092..20141462
Genome browser
AA seq
1654 aa
AA seq
DB search
MKWKCFPFFVTVAVLGLSRLAVFQAQLIPDSDDLERGNDNGTPLPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGDRVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPADVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSSLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPIPTLRWRKDDG
ELPKSRYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQVVSEPPHFVVKP
RDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITS
VQRSDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPVIRQGPGNQTVAVDGTLALSCV
ATGSPVPTILWRKDGVLISTQDSRIKQLESGVLQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKMETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPFAAS
YGESEWLVFEVRTPTKNSAVIPELKKGVNYEIKARPFFNEFQGADSEVRFAKTLEEAPSA
PPQSVTVTKNDGNGTAILVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINKTVDGSTFSV
VIPSLVPGIRYSVEVAAGTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIA
NYNNQLENKQTNLMLPESSVYGDVDLSNKMNEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNISNNMNNGSGEANEKHWKPPSQPKQEVAPIQYNIMEQNKLNKDYRVNDPVPPTIP
YNQAYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKLPKQGGMNWADLLPPPPAHPPPHS
NSEDFSLSVDESYDQEVPGPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAAVSYS
HQSTATLTPSPQEELQPMLQECPQEIGHLQHQPDRRRQPGSPPPPPRPISPPHTYGYISG
PLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGS
ASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASH
LPRPTSPVSTDSNMSAAVIQKVRPPKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTVQ
SKTQLEVRSVMLPKLPSIDPRTDRSSERKGGNYKGRDGADGRQHSDVRTNPGDHRDIQEL
QGDGKGRGSKAAKRDVPATKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGGRQ
RDQGNVGRRNVAEMQVLGAYEREDDEEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaatgttttccctttttcgtcacggtagcagtacttggcctgtccagactt
gctgtgtttcaggcacagctcattccagactctgacgacctagagagggggaatgacaac
gggacaccgcttcccacctctgataacgatgacaattcgctgggctatacaggttcccgg
cttcgtcaagaggatttcccacctcgaattgttgagcatccttcagatctcattgtgtcg
aagggagaaccagcaactttgaactgcaaagctgaaggccggccaacaccaactattgag
tggtataaagggggagacagagtggagacggacaaagatgaccctcgttcccaccggatg
ttgctgccaagtggatctttatttttcttacgtatagtccacggacgcaaaagtagaccc
gatgagggggtctatgtctgtgtagcaaggaattacctgggagaagccgtgagccacaac
gcatcgctggaggtagctatattacgcgatgatttcagacaaaaccccgcagatgtaatg
gtggctgtcggagaacctgccgtgatggaatgccaacctccacgaggccatccagaaccc
actatttcgtggaagaaggacggatcgtcactggacgataaagatgaaaggattacgatt
cgtggagggaagcttatgatcacctatacccgaaagagtgatgcaggcaaatatgtttgc
gttggaacgaatatggtgggggaacgagaaagtgaggtggctgaactcaccgttttggag
cgaccatcatttgtgaagagacccagtaatttggctgtaactgtggatgacagtgcagaa
tttaagtgtgaagcccgaggtgaccccatccccacactccgatggcgaaaagatgacggg
gaattgccaaaatctagatatgaaatccgggacgatcacaccctaaaaatccggaaagtg
acggcaggagatatgggatcatacacttgtgttgcagaaaatatggttgggaaagctgaa
gcatcagcaactctcactgtccaagttgtgtctgaacctccacattttgttgtgaaacct
cgggaccaggttgctgccttggggcgcactgtcactttccagtgtgaagcaaccggaaat
cctcagccggctatcttctggaggagagagggaagtcagaacctgcttttttcatatcag
cctccacagtcatccagtcgcttctccgtctcccagactggggatctcaccatcacaagc
gtccagagatctgacgtgggatactatatatgccagaccttaaacgttgcgggaagcatc
acaacgaaagcctatttggaggttactgatgtgattgcagaccgtcctcccccggtcatt
cggcagggtcctgggaatcagacggtagctgtggatggcacgttagccctcagctgtgtg
gcaacgggcagcccggttcccaccatcctctggagaaaggacggggtcctcatttccaca
caggactcccgcatcaagcagctggagtcgggggtattgcagattcgctatgccaagctg
ggtgacaccggtcggtacacctgcatcgcttcaaccccgagtggcgaagctacatggagt
gcgtacattgaagttcaagaatttggagttccagttcagcctccgagacccactgacccg
aatttaatccccagtgccccatcaaagccagaagtcactgatgtcagcagaaatacagta
acattatcctggcaaccaaatttgaattcaggtgcaactccaacatcttatatcatagaa
gccttcagccatgcatctggcagcagctggcagacagtagcagaaaatgtgaaaatggaa
acattcgccattaaaggcctcaagcctaatgcaatttacctcttccttgtgagagctgca
aatgcatatggaattagtgatccgagccagatttcagatccagtgaaaacacaagatgtc
ccaccaacaagccagggagtggatcacaagcaggtgcagcgagaactaggagatgtggtc
ctgcacctccacaaccccacgatcctttcctcctcttcagttgaagttcattggacagtg
gaccagcaatctcagtatattcaggggtataaaattttgtacagaccatttgcagcaagt
tatggagaatcggagtggttggtttttgaagtgaggaccccgaccaaaaacagtgccgtg
ataccagaactgaaaaaaggagttaactatgaaatcaaggcccggcccttctttaatgaa
ttccaaggtgccgatagcgaagtcagatttgccaaaacactggaggaagcacccagtgct
ccgccccagagcgtgactgtgacgaagaatgatgggaacgggactgcaattctggttacc
tggcagccgcccccagaagatacccagaatggaatggtccaggaatataaggtttggtgc
ttaggcaatgagagccgataccatataaacaagacagtggatggctctaccttttctgta
gtcattccatcgctggttccggggatccgttacagtgtggaagtagcagctggaactggt
gcaggacctggagtgaaaagcgaaccccagtttatccagttagattcccatgggaacccg
gtttcaccggaagaccaagttagccttgctcagcagatttcagatgtcgtgaagcagcca
gccttcatagctggcatcggtgcagcctgttggattatccttatggtcttcagcatctgg
ctgtatcgccaccggaaaaagcgaaatggactgaccagtacttatgccgggatccggaaa
gtcccgtcttttaccttcacaccaacagtaacttaccagcgaggaggcgaagctgtgagc
agcggaggcaggccgggacttctcaatatcagcgaacctgccactcagccgtggctggca
gatacttggcctaacactggcaacaatcacaatgactgttctattaactgctgcacagca
gggaacggaaacagcgatagcaatctgactacgtacagtcggccagctgattgtatagcg
aattataacaatcagctggaaaacaagcaaacaaacctgatgcttccagaatcatcggtt
tatggggacgtggacctgagcaacaaaatgaacgagatgaaaaccttcaatagcccaaat
ctgaaggatggacgatttgtcaatccgtcaggacagcccactccctatgccaccactcag
ctcatccagtcaaacatcagcaataacatgaacaatggcagcggggaggcgaatgagaaa
cactggaagccccctagtcaaccaaaacaggaggtggcacccattcagtataacattatg
gagcaaaacaaattaaacaaagattacagagtaaatgaccctgttcccccaactattcct
tacaaccaagcctatgaccagaataccgggggatcctacaacagttcagatcgaggcagt
agtacatctgggagccaagggcacaaaaaaggagcccgaacccccaagttacctaaacaa
ggtggtatgaactgggcagatctgctgccacctcctccagcacatcctcctccacacagc
aacagtgaagatttcagcctttctgtcgacgaaagctacgaccaagaagtcccagggcca
gtgcctccagctaggatgtatttacagcaagacgagctggaagaagaggaagaagatgaa
cggggacctactccaccagtgcgaggagcagcctcctccccggcggccgtgtcctatagt
caccagtctacggccacactaactccttcccctcaagaagagctccaacctatgttacaa
gaatgcccacaagaaattggccatttgcagcaccagccggacagaagacgccagcctggg
agcccacctcccccaccaaggcctatttccccaccgcacacttatggctacatttctggg
ccactggtttcggatatggacaccgatgctccggaagaggaagaggatgaagcggacatg
gaggtggccaagatgcaaaccagaaggctgcttctgcgggggctagagcagacacccgcc
tccagcgtcggagatttggaaagctccgtaacgggctctatgatcaacggctggggttcg
gcctcagaagaggacaacatctcaagcggacggtccagcgttagttcctctgatggttcg
tttttcaccgatgccgattttgcacaggctgtagcagcggcggccgaatacgccggtctg
aaggtagcaagacggcaaatgcaggatgctgcaggtcgcaggcattttcacgcatcgcac
ttacctcggcccacgagccccgtctctacagacagcaatatgagcgctgctgttatacag
aaggtccgaccccccaagaaacagaagcaccagcccggacacttacgcagagaagtctac
acggacgatctgccgccacctccagtgcccccacccgctatcaaatcacccactgtccaa
tccaagacccagctggaggtacgatctgtaatgttgccaaaactcccttcgatagacccg
agaacagacaggtcttcggagagaaaaggaggtaattataaagggagagacggggcagat
gggagacagcactctgatgtgcggacaaatccgggagatcatcgagacatccaggaactc
caaggtgacggaaaagggagaggaagcaaggcagccaaacgagacgttccagcaacaaaa
actcatctcatccaagaagatatcctaccttactgtagacctacatttcccacatcaaat
aatcctagagatcccagttcctccagctcaatgtcatctagaggatccggagggagacag
agggatcaaggaaatgtaggtcgaaggaatgtggccgaaatgcaagtcctgggagcatat
gagagggaagatgatgaagaagaattagaggaaaccgaaagctga
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integrated database retrieval system
