Tachyglossus aculeatus (Australian echidna): 119945146
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Entry
119945146 CDS
T10703
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tacu03009
]
119945146 (LTN1)
04121 Ubiquitin system [BR:
tacu04121
]
119945146 (LTN1)
Enzymes [BR:
tacu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119945146 (LTN1)
Ribosome biogenesis [BR:
tacu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119945146 (LTN1)
Ubiquitin system [BR:
tacu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119945146 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
HEAT_GCN1
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119945146
NCBI-ProteinID:
XP_038622102
LinkDB
All DBs
Position
24:complement(28461899..28487254)
Genome browser
AA seq
1768 aa
AA seq
DB search
MGGKNKQRTKGNLRPSSSGRAAELLAKERGTVPGFLGFGTSPSDLGYVPAVQGAEEMDGL
VEADFRVVLRKLSKKDVTTKLKAMQEFGAMCRERDAETVRGVLPYWPRIYCKISLDHDRR
VREATQQAFEGLITKVRKHLAPHLKTLMGFWLMAQCDPHSPAASAARAAFEAAFPPAKQA
GAVAFCQDEILGTLQDHLLKETADTVSDPQTVPEEERKAKFFRILTCSLLALKKLLCLLP
GSEVPSVEEKLKPLLSQSRFWKYGRHDAPQVRAAFFELVSALCRHSPRTARDQAARVCPA
VLLGLDDGDPVVCPALWEAALYVLTAVEDCWSHVNARKGVFPKLWAVLREGGRGLATVVH
PHLLPLVSKIPAAVTEPRLDFFQNFFTSAVQGLSSSGAVASPSERAAIFAAFMECCRFVM
LQSLGADGEAPALRQMLIENQLVPLVGAGLRDPRWQDGPLFARAAAVLGSWEAAAESPGE
DPEAAAALNQVLSGLWESLSRLCRDIVAQPEADAVALAGVSGLLRALRAPEPGVRRAGGV
RFADGPAPEGDAPGPARPGPVSGRRAAPLEALVCRLAALSLALVNEHGSAPHLAFLSALL
DSCPSDAVFRVLAGDGGEAGDPAVRFVERRLLPWLGTHRPEEMDVLVDILYGALRCCGGG
AAARAGLLDRLAQAELPWEAVLLQVLRKACSGPAQLALVSAWLPGEVLGQRLVALADLLC
DAGPGASAAPGDRAGPRWALLGLALCPPAGSDSWIGDAYVSRILDRLVATLAEAEAPGAG
ERLPSAVCDLASDFFRSAGGRPLAASAQELLLTVFRLCCRAPAAARLSDSLVCRLKRAWR
SGLGSLALQLGSGRAAGTFLPASARWLKSRVRSSPLDVKSLQGLLSPAGEILEVLLEAGP
AAASLLGLFLDELLPDPHQWATMRRALALQWWRRPLLEGRFCWDPEASAGAAGAADSPAL
PAHLCCAALAGALLLPALRRDAPLRDGVAQETVAELLYALQWCDELEAPPGELAEYGAML
QTVSISYEKLSHLADLSGLLPLLFARARADGALWALTVARLVRTRRTAPAEVNRLLVTPD
GYGGDPAPDAPGSPAGGPLPPGAGRGRPEGLPRIATRLFPLTEGKLHTIQCLCPFLPKEN
QEELVVQCAARLLTCPETDICDVAGGLGYLAIVNSCLKTARVDEREREHGILKTILSWKN
VDREIFLFSRSLKGCGSTLVRLNVEMIRFIALLPRDGTPPWTHGQWDFILCAMLSWLEST
WESLASDSPPLVQLFACLSCDLASTLSAHFQSGAPDDGGLPDNLAGEWRDFFSEGIHRLL
LPLLVELTEESAERPETPFRTALLESLGHALTFVSRAQLLEHRLPSRLLPGQRTNLPGPL
QSLLNTLAPLLLRAPDRPVQVTAYHMLAKLMSELPQFDDEDLRSYGDEEEEPALSPPAAL
MSVLGTQEDVVDDILDCVPVGEAVTIQPRSPEFGHVLGYLLTWKLVLIFFKAASSQLRVL
YSLHLRRTKSLQKLLYHLFRLMPACPVYPAAPGEPPAKEPKTFFTEELRLDVKGTAAPAS
LIPHLACRVYRVALEDLPAMVRLWWNGCDKRVFGLVDKFTSRHVSGALSAHEIASVQTSA
QLFSGMTVKARSATREVVATYSVDDIFIELIIQLPPNYPLGSIAVESGKRVGVAVQQWRT
WMLQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCK
KKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggaccaaggggaacctgcggccgtccagcagcggccgt
gccgccgagctgttggccaaagagcgggggacggtcccgggcttcctcggcttcgggacg
tcccccagcgacctgggctacgtccccgccgtccagggggccgaggagatggacggcctg
gtggaggcggacttccgcgtggtcctccgcaagctctccaagaaggacgtcaccaccaag
ctcaaagcgatgcaggagtttggagccatgtgtcgagagagagacgcggagaccgtcaga
ggggtcctcccgtactggccccggatctactgcaaaatctccctggatcacgaccggcgg
gtgcgggaggccacccagcaggccttcgaggggctcatcaccaaagtccggaagcacctg
gcccctcacctgaagaccctcatgggcttctggctcatggcccagtgcgacccccactcg
cccgccgcctccgccgcccgggcggccttcgaggccgccttccccccggccaagcaggcc
ggagccgtggccttctgccaggacgagatcctcggcacgctgcaggaccacctcctgaag
gagaccgcggacaccgtcagcgatccgcaaaccgtcccggaggaagagaggaaggccaag
ttcttccgcatcctgacctgctccctgctggccctgaagaagttgctctgcctgttgccg
ggctccgaggtcccctcggtggaggagaagctgaaacccctcctgtcccagagcaggttc
tggaaatacggcagacacgacgcccctcaggtgcgcgccgccttcttcgagctggtgtcc
gcgctgtgccgccactcgccccgcacggcgagggaccaggcggcccgggtgtgccccgcc
gtcctcctcggcctcgacgacggcgaccccgtggtctgcccggccctctgggaggccgcg
ctctacgtgctgaccgccgtggaggactgctggagccatgtgaacgcacggaagggggtg
ttccccaagctgtgggccgtcctgcgcgagggcggccgcgggctggccaccgtcgtccac
cctcacctcctgcccctggtcagcaagatccccgccgccgtcacggagcccaggctggac
tttttccagaacttcttcacctctgcggtccaggggctgtcttcgtcgggggccgtggcc
agcccttcggagcgggccgccatcttcgccgccttcatggagtgctgccgcttcgtcatg
ctgcagagcctgggcgccgacggcgaggccccggccctccgccagatgctcatcgaaaac
cagctggtccccctggtcggagccggcctccgagacccgcggtggcaggacggcccgctc
ttcgcccgggcggccgcggtcctgggctcctgggaggcggccgcggagagccccggggag
gacccggaggccgcggcggctttgaaccaggtcctgtccggcctctgggagagcctgtcc
cgcctctgccgggacatcgtggcccagcccgaggccgacgccgtggccctggcgggggtc
tccggcctgctgcgggccctccgggccccggagcccggggtccggcgggcgggcggggtg
cgcttcgccgacgggcccgcccccgagggggacgcccccggcccggcccggcccggcccc
gtctccggccggcgggcggccccgctggaggccctggtctgccggctggccgccctgagc
ctcgccctcgtcaacgagcacgggtccgcgccccacctggccttcctctcggccctgctg
gactcctgcccgtccgacgccgtgttccgggtgctggcgggcgacgggggcgaggccggg
gaccccgccgtgcgcttcgtggagcggaggctgctgccctggctgggcacccaccggccg
gaggagatggacgtcttggtggacatcctgtacggcgccctgcgctgctgcggcggcggc
gccgccgcgagggcgggcctcctggaccgtctggcccaggccgaactgccgtgggaggcc
gtcctccttcaggtcctgcggaaggcctgttccggccccgctcagctggccttggtgtcc
gcgtggctaccgggagaggtcctcggccagaggctggtggccctggccgacctcctgtgt
gatgccggcccgggggcttcggccgccccgggggaccgcgccggccccaggtgggccctg
ctcggcctggccctgtgcccgcccgccggaagcgactcctggatcggagacgcctacgtc
tcccggatcctcgaccggctcgtggccaccctggccgaagccgaggcccccggggccggc
gagcggctgccgtcagccgtctgcgacctggcctcggacttcttccgctcggcgggcggg
cggccgctcgcggcctcggcccaggagctgctgctgaccgtcttccggctgtgctgccgg
gccccggccgccgcgcgcctgtcggactcgctggtctgccggctgaagagggcatggcgg
tccggcctcggctctctggccctgcagctgggcagcggccgcgccgccggcacgtttctg
cccgcgtcggcccggtggctgaagagccgggtccggtcttctccgctggacgtcaagagc
cttcaggggctgctgtcgccggcgggggagatcctggaggtgctgctggaggccggcccg
gccgccgcctccctcctgggcctcttcctggacgagctgctgcccgaccctcaccagtgg
gcaaccatgcggcgggccctcgccctccagtggtggcgccggcccctgctggaggggcgc
ttctgctgggaccccgaggcctccgccggggcggccggggcggccgactcgccggcgctt
cccgctcacctctgctgtgccgccttggccggggcgctgctgctgccggccctgcgccgc
gacgcgcctctgcgggacggcgtcgcccaggagacagttgcggagctgctgtacgcgctg
cagtggtgcgacgagctggaagccccgcccggcgagctcgcggagtacggggccatgctt
cagaccgtgagcatttcttacgagaaactgagtcacctggctgacctgagcggcctcctc
cctctgctgttcgccagggccagagccgacggggccctctgggccctgacggtggctcgc
ctggtccgcacgcggaggacggcccccgccgaagtgaaccgcctgttggtgaccccggac
gggtacggcggggaccccgcgcccgacgcccccggctctccggcgggcggcccccttcct
cccggagccggccggggaaggccggaggggctcccgcggatcgcgacgcggctgttcccc
ctcacggagggaaagctgcacaccattcagtgcctgtgcccgttcctgcccaaggagaac
caggaagagctggtggttcagtgcgccgcccggcttctcacctgcccggagacggacatc
tgcgacgtcgccgggggcctgggctacctggccatcgtcaactcctgcctgaaaacggcc
cgcgtggacgagagggagcgagagcacgggatcctgaagaccatcctgtcgtggaagaac
gtggaccgggagattttcctgttcagccgctctctgaaggggtgcggctccaccctggtc
cggctgaacgtggagatgatccgcttcatcgccctgctgccccgggacggcaccccgccc
tggacgcacggccagtgggacttcatcctgtgcgccatgctgtcctggctggagagcacg
tgggagagcctggcgtcggactcgcccccgctggtccagctgttcgcctgcctgagctgc
gacctggccagcacgctgagcgcccacttccagagcggggcccccgacgacggcggcctc
cccgacaacctggccggcgagtggcgggacttcttctccgagggcatccacaggctgctg
ctgccgctgctggtggagctcacagaggagagcgcggagaggccggagacgcccttccgg
acggccctgctggagtccctgggccacgcgctgaccttcgtgtcgcgggcccagctgctg
gagcaccgcctcccgtcccgcctgctgcccggccagaggaccaacctgcccggcccgctg
cagtcgctgctcaacaccctggccccgctgctgctgcgggccccggaccggcccgtccaa
gtcaccgcctaccacatgctagccaagttgatgtccgagctgccccagttcgacgacgaa
gatctcaggtcctacggcgacgaagaggaggaaccagctctgtcccctcccgccgccctg
atgtccgtcctcggcacccaggaagacgtagtggacgacatcctggactgcgtgcccgtc
ggggaggcggtgaccatccagccccggagcccggagttcggccacgtgctcggctacctc
ctgacctggaagttggtgctcattttcttcaaggcggcctcctcccagctgcgggtcctc
tactccctgcacctgcggcggaccaaaagcctccagaagctgctgtaccacctgttccgg
ctcatgcccgcctgccccgtctacccggcggcccccggcgagcccccggccaaggagccc
aagaccttcttcacggaggagctccgcctggacgtcaaagggacggcggccccggcctcg
ctgatcccgcacctggcgtgccgggtgtaccgcgtggccctggaggacctgccggccatg
gtgcggctctggtggaacggctgcgacaagcgcgtcttcggcctcgtggacaagttcacc
agcaggcacgtgagcggcgcgctgtcggcccacgagatcgcctcggtgcagaccagcgcc
cagctcttcagcggcatgacggtgaaggcccgctccgccacccgcgaggtggtggccacc
tactcggtggacgacatcttcatcgagctgatcatccagctgccccccaactacccgctg
ggctccatcgcggtggagagcgggaagcgggtgggcgtggcggtccagcagtggcgcacc
tggatgctgcagctgagcacctacctcacgcaccagaacggcagcatcatggagggcctg
gccctgtggaagaacaacgtggacaagcgcttcgagggggtggaggactgcatgatctgc
ttctccgtcatccacggcttcaactactccctccccaagaaggcctgcaggacctgcaag
aagaaattccactcggcctgcctgtacaagtggttcacctccagcaacaaatccacctgc
cccctgtgccgggagacgtttttctga
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