Tachyglossus aculeatus (Australian echidna): 119945978
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Entry
119945978 CDS
T10703
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03015
mRNA surveillance pathway
tacu04530
Tight junction
Brite
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119945978 (SYMPK)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119945978 (SYMPK)
U7-dependent histone pre-mRNA processing factors
119945978 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Adaptin_N
INTS7_N
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
119945978
NCBI-ProteinID:
XP_038623236
LinkDB
All DBs
Position
26:complement(1046681..1059108)
Genome browser
AA seq
1261 aa
AA seq
DB search
MASGSGATRMSVASQFFTQDDGGGVDGMSTSERVVDLLNQAALISSDSKITMLKQVQELI
INKDPTLLDNFLDEIIAFQADKSVEVRKFVIGFIEEACKRDIELLLKLIANLNMLLKDEN
VNVVKKAILTMTQLYKVALQWMVKSKAVSEMQEACWEMVSAMAADIILLLDSDNDGIRTH
AIKFVEGLVVTLSPRGADSDVPRRHERDVSLDRVPKDHPYIKHHVLWDEGRNALEQLLKF
MVHPAISSINLTTALGALANIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNLK
LHLLSVLKHPSSCDFQPQITTLLVDLGTPQAEIARNTPSLREPRKRPREDGDPVLKKMKI
EPGLAEDDEDKDLEPSNPSTAKPSAQSAAQSDTDITAEFLQPLLTPDNVANLVLISMVYL
PEAMPASFQATYTPVESAGTDAQIKHLARLMATQMTAAGLGPGVEHPKLPKTEPKEEKLV
KPENVLIKRRLSALGQGQAISVLGSQTASAAPLPDDVPQVKRRPEPIIPATQPRLAGVGG
RKKVFRLSDVLKPLTDSQIEAMKLGAVTRILRAEKAVACSGAAQVRVKILASLVPQLAVG
LKEQVLAFILEDVRSRLDLAFAWLYQEYNAYLAAGPAGSLDKYDACLIGLLSGLQEKPDQ
KDGVFTKVVLEAPLITESALEVVRKYCEDESRAYLGMATLRDLIFKRPSRQFQFLHALLD
LSSHDKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVVEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDGGSAVSPLTPGELLVALHNVDSVKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQGLTMYPRLGGFVMNI
LSRLIMKQVWKFPKVWEGFIKCCQRTKPQSFQVILQLPPQQLSAVFDKCPELREPLLAHV
RSFTPHQQAHIPHSIMAILEASSKQDPEAKEPPSPALDEEELEPLALAPRPGQDLIALRL
AQEKALKRQLEEEQKLKLPAAARPGLPLSEEATDFHDEGLEGDMSSIFISVEDGGSLAEG
TILDSSLEGLLGQELDPKEEGASPNPALDDTLVACSPEPRVPSPEAKAKSGGGSGGNGGG
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggagcggcgccacgcgcatgagtgtggcctcgcagttcttcactcaggac
gacggcgggggcgtcgacggcatgagcacctcggagcgggtggtggacttgctgaaccag
gcggccctgatctccagtgattcaaaaatcaccatgctcaagcaggtccaggagctgatc
atcaacaaggacccaacgctactggacaatttcctagatgagatcatcgccttccaggca
gacaaatcggttgaggtgcgcaaatttgtcatcggcttcatcgaggaagcttgcaagagg
gacatcgagttgctgctgaaactgattgccaacttgaacatgctgctcaaggatgagaat
gtgaatgtggtgaagaaggccatccttaccatgacccagctttacaaggtggccctgcag
tggatggtgaagtccaaggcggtcagcgagatgcaggaggcctgctgggagatggtttcg
gccatggccgcagacatcatcctgctgctggactcggacaatgacggcatccgcacccac
gccatcaagttcgtggagggtctcgtcgtcaccttgtccccccgcggggctgactcggac
gtgccccggcgccacgagcgcgacgtcagcctcgaccgcgtgcccaaggaccacccctac
atcaaacaccacgtgctgtgggacgagggccggaacgcgctggaacagctgttgaagttc
atggtgcacccggccatctcatccatcaacctgaccacggccctgggagccctcgccaac
atcgcccgccagcgccccatgttcatggccgaggtcatccaggcctacgagaccctccac
gccaacctgccccccacactggccaagtcgcaggtcagcagcgtgcgcaagaacctgaag
ctgcacctgctgagtgtcctgaagcacccgtcgtcctgcgacttccagcctcagatcacc
acgctgctcgtggacctgggcaccccccaggccgagatcgcccgcaacacacccagcctc
agggagccgcggaagcgcccacgcgaggatggagacccggtcctgaagaagatgaagatc
gagcccggtctggccgaggacgacgaggacaaggacctggagccgagcaacccttcgacc
gccaagccgtcggcccagagcgcggcccagtcagacacggacatcacggctgagttcctg
caaccactgctcacaccggacaacgtggccaacctggtgctgatcagcatggtgtacttg
cccgaggccatgcccgcctccttccaggctacctacacgccagtggagtcagcgggcacc
gatgcccagatcaagcacctggcccgcctcatggccacgcagatgactgccgcaggactt
ggcccaggtgtggagcaccccaagctccccaagacggagcccaaggaggagaagctggtc
aagccggagaacgtgctgatcaagcggcggctgtcagccctgggccagggccaggccatc
tctgtgctcggctcccagacagcttccgctgcccccctgcccgatgacgtgccgcaggtc
aagaggcggcccgagcccatcatcccggccacccagccccggctggctggcgtgggaggc
cgcaagaaggtttttcgcctgagcgatgtgctgaagccactgacggacagccagatcgag
gccatgaagctgggggccgtgacccgcatcctgcgcgccgagaaggccgtggcctgcagc
ggggccgcccaggtgcgtgtgaagatcctggccagcctggtaccacagctggcggtgggg
ctgaaggagcaggtcctggccttcatcctggaggacgtccgctcccgcctcgacctggcc
ttcgcctggctctaccaggagtacaacgcctacctggccgccgggccagccggctcgctg
gacaagtacgacgcctgcctcatcggcctgctgtctggcctgcaggagaagcccgaccag
aaggacggggtcttcaccaaggtggtactggaggcgccgctcatcacagagagcgccctg
gaagtggtccgcaagtactgtgaggacgagagccgggcctaccttgggatggcgaccctc
cgggacctgatcttcaagcgcccatcgcgccagttccagttcctgcatgcgcttctggac
ctcagctcccacgacaaggacaaggtccgctctcaggccctcctgttcatcaagcgcatg
tacgagaaggagcagctgcgggagtacgtggagaagtttgccctcaactacctgcagctg
ctggtgcaccccaacccaccctccgtgctgtttggggccgacaaggacacggaggtggcg
gctccctggacggaagagacggtgaagcagtgcctctacctctacctggcactgctgccc
caaaaccacaagctgatccacgagctggcggccgtctacaccgaggccatcgccgacatc
aagcgcaccgtcctcagggtcgtcgagcagccgatccggggtatgggcatgaactccccc
gagctgctcctgttggtggagaactgccccaagggagcggagaccctggtgacccgctgc
ctgcacagcctcacggacaaagtgcctccgtccccggagctggtgaagcgtgtgcgggac
ctgtaccacaagcgtctgcctgacgtccgcttcctcatccccgtgctcaacgggctggag
aagaaggaggtcatccaggcgctgccgaaactcatcaaactgaaccccatcgtggtcaag
gaggtgttcaaccggctgctcggcacccagcacggtgacgggggctccgccgtgtccccg
ctgacccccggcgagctgctcgtcgccctgcacaacgtcgactcggtcaagtgcgacatg
aagtccatcatcaaagccaccaacctgtgctttgcggagcgcaacgtgtacacgtcggaa
gtgctggccgtggtcatgcagcagctgatggagcagagccccctccccatgctgctcatg
cgcacggtcatccagggcctcaccatgtacccgcgccttggcggcttcgtcatgaacatc
ctctcccgcctcatcatgaagcaggtgtggaagttccccaaggtgtgggagggtttcatc
aagtgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccccctcag
cagctcagcgccgtgttcgacaagtgtcccgagctgcgggagcccctcctggcccacgtc
cgctccttcaccccccaccagcaagcccacatcccccactccatcatggccatcctggag
gccagcagcaagcaggaccccgaggccaaggagccgccctccccggccctggacgaggag
gagctggagcccctggcgctggcgccgcggccgggccaggacctgatcgcgctgcgcctg
gcccaggagaaagcgctcaagcggcagctggaggaggagcagaagctcaagctgccggcg
gctgcccggcccggcctcccgctctccgaagaggcgacggacttccacgacgaagggctg
gagggcgacatgtccagcatcttcatcagcgtcgaggacggcggcagcctggccgagggc
accatcctggactccagcctggaggggctgctgggccaggagttggatcccaaggaggag
ggggccagcccgaacccggccctcgacgacaccctggtagcctgcagcccggagcccagg
gttcccagcccggaggccaaggccaagagcggcggcggcagcggcgggaacgggggcggc
agctga
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integrated database retrieval system
