Tachyglossus aculeatus (Australian echidna): 119947081
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Entry
119947081 CDS
T10703
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119947081 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tacu03041
]
119947081 (DHX16)
Enzymes [BR:
tacu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119947081 (DHX16)
Spliceosome [BR:
tacu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119947081 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
119947081
NCBI-ProteinID:
XP_038624521
LinkDB
All DBs
Position
Y4:complement(1087369..1102724)
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AA seq
1059 aa
AA seq
DB search
MATPAGLEHWVEDELHAVLGLSERHLAPFLIGTARRCDSAEDFVRRLRDTGALAADGPAR
DFALTLWSKVPRKVLAERPARAAERAALALQEKNKAYRLLEDSEDSGPETQSAGAPAAPS
ASRKKRHLRRRRRREEEEEEDEEEREREAAGRAEKSRAGGSRAPTGEKAESEDEWERSER
ERLRDLEERDAFAQRVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDQKTMIPELRKK
SRREYLAKREREKLEDLEAELADEEFLFGDQRLSGAERREIRYKRRVRDLAREYRAAGQQ
EKLEATNRYRMPEETRGPPAVETEVEEAGSGAPGEEQRRWEEARLGAATLRFGAKDAAPR
EPEYKLLLLDEEEEAAAAAIDFVCATRLDGDQEASAGSSPAGQAERDESIRAVRRSLPVF
PFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTRDGMKIACTQPRRVAAMSVA
ARVAKEMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLGSYSVVMVDEA
HERTLHTDVLFGLIKDVARFRPGLKVLVASATLDTARFATFFDDAPVFRIPGRRYPVDIF
YTKAPEADYLEACVVSVLQIHVTQPPGDVLVFLTGQEEIETACEMLQDRCRRLGSKIREL
LVLPIYANLPSDKQAKIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNP
RTGMESLVVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEDTTVPEIQRTSLGN
VVLLLKSLGINDLIHFDFLDPPPHETLVLALEQLYALGALNHLGELTKLGRKMAELPVDP
MLSKMILASEQYGCSEEILTVAAMLSVNNAIFYRPKDKVVHADNARANFFVPGGDHLVLL
NVYTQWVDSGYSAQWCYENFVQLRSLRRARDVREQLEGLLERVEVGLTSCQGDHTRVRKA
ITAGYFYHTARLMRSGYRTVKQQQTVYIHPNSCLFEEQPRWLLYHELVFTTKEFMRQVLE
IESSWLLEVAPHYYKARELEDPSAKKMPKKVGKVREELG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcgggcctggagcactgggtggaggacgagctgcacgccgtgctcggg
ctgagcgaacggcacctggcccccttcctcatcggcaccgcgcgacgctgcgactcggcc
gaagacttcgtgcggcggctgcgggacaccggcgccctggccgccgacgggccggcacgg
gacttcgccctgacgctctggagcaaggttccacggaaggtgttggcggagcgtccggcg
cgggcggcggagcgggcggccttggccctgcaggagaagaacaaggcctacaggctgctg
gaggacagcgaggacagcggcccggagacccagtccgccggggcccccgccgccccgtcc
gccagccgcaagaagagacacctgaggcggaggcggcggcgggaggaggaggaggaggag
gatgaggaagaacgggagcgggaggcggccggccgcgcggagaagagccgggccgggggg
agccgggcccccacgggggagaaggcggagtcggaggacgagtgggagcgcagcgagcgg
gagcgcctgcgggacctggaggaacgcgacgccttcgctcagcgcgtgcgccagcgggac
aaggaccgcacccgcaacgtgttggagcgctccgacaagaaggcgtatgaggaggctcag
aaacggctcaaaatggcggaggaggaccagaaaacgatgatccccgagctgcggaagaag
tcgcggcgagagtacttggcgaagcgggagcgggagaagctggaggacctggaggcggag
ctggcggacgaggaattcctgttcggggaccagcggctcagcggggccgagcggcgggag
atccgctacaagcgccgggtgcgggacttggcccgagagtaccgggccgccggacagcag
gagaagctggaggccaccaaccgctaccgcatgccggaggagacccggggaccgccggca
gtggagacggaggtggaggaggcggggtcgggagctcccggggaggagcaacggcgctgg
gaggaggcccgcctgggggccgccacgctgcgcttcggggccaaggatgccgccccccgg
gaacccgagtacaagctgctgctgctggacgaggaggaggaggccgcggccgcggccatc
gacttcgtctgcgccacccggctcgacggcgaccaggaggcgtcggcgggttcctcgccg
gccggccaggcggagcgcgacgagtcgatccgggccgtccgccgcagccttcccgtgttc
cccttccgcgaggagctcctggccgccatcgccgaccaccaggtgctcatcatcgagggc
gagaccggctcggggaagaccacgcagatcccccagtacctctttgaggagggctacacg
agggacgggatgaagatcgcctgtacccagcctcgccgggtggcggccatgagcgtggcc
gcccgcgtcgccaaggagatgggggtgaagctggggaacgaggtgggctacagcatccgc
ttcgaagactgcacctcggagcgcacggttctccgctacatgaccgacgggatgctcctc
cgggaattcctctccgagcccgacctcgggagctacagcgtggtgatggtggacgaggcc
cacgagcggacgctgcacacggacgtgctgttcggcctgatcaaggacgtggcccgcttc
cgccccggcctcaaggtcctggtggcctcggctaccttggacacggcccgcttcgccacc
ttcttcgacgacgcgcccgtcttccgcatccccggccggcgctaccccgtggacatcttc
tacaccaaggcgccggaggcggactacctggaggcgtgtgtggtgtccgtgctgcagatc
cacgtgacgcagccccccggggacgtgctggtgttcctgactgggcaggaggagatcgag
acggcctgcgagatgctccaggaccgctgccgccgcctgggctccaagatccgcgagctg
ctggtgctgcccatctacgccaacctgccgtccgacaagcaggccaagatcttccagccc
acgccccccggagctcgcaaggtggtggtcgccacgaacatcgcggagacgtcgctgacc
atcgagggcatcatctacgtcctggatcccggcttctgcaagcagaagagctacaacccg
cgcactggcatggagtctctggtcgtcaccccctgcagcaaggcctcggccaaccagcgg
gcagggcgggcgggccgggtggcggccggcaagtgcttccgtctgtacacggcctgggcc
taccagcacgagctggaggacactaccgtccccgagatccagaggaccagcctgggcaac
gtcgtcctgctcctcaagagcctgggaatcaacgacctgatccattttgacttcctggac
cctccgccccacgagaccctggtgctggccctggagcaactctatgcgctgggtgcgctc
aaccacctcggggagctcaccaagctgggccgtaagatggcggagctgcccgtggacccc
atgctgtccaagatgatcctggcctctgagcagtacggctgctctgaggagatcttgacg
gtggcggccatgctgtccgtgaacaacgccatcttctaccggcccaaggacaaggtcgtc
cacgccgacaacgcccgggccaacttcttcgtgcccggcggggaccacctggtgctgctt
aacgtctacacccagtgggtggacagcggctactcggcgcagtggtgctacgagaacttc
gtgcagctgcgctcgctgcgccgggcccgggacgtgcgggagcagctggaggggctgctg
gagcgcgtcgaggtggggctcacctcctgccagggcgaccacacccgcgtccgcaaggcg
atcaccgccggctatttctaccacacggcccgactgatgcgcagcggctaccgcacggtg
aagcagcagcagacggtgtacatccacccgaactcctgcctcttcgaggagcagccccgc
tggctgctctaccacgagctcgtcttcaccaccaaggagttcatgagacaggtgctggag
atcgagagcagctggttgctggaagtggccccccactactacaaggcccgcgagctggag
gaccccagtgcgaaaaagatgcccaagaaagtgggcaaggtgcgggaggaactcggctag
DBGET
integrated database retrieval system
