Tachyglossus aculeatus (Australian echidna): 119947254
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Entry
119947254 CDS
T10703
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119947254 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119947254 (SMG5)
03032 DNA replication proteins [BR:
tacu03032
]
119947254 (SMG5)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119947254 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
119947254 (SMG5)
DNA replication proteins [BR:
tacu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
119947254 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Nop14
Motif
Other DBs
NCBI-GeneID:
119947254
NCBI-ProteinID:
XP_038624793
LinkDB
All DBs
Position
Y4:complement(13509430..13522910)
Genome browser
AA seq
1053 aa
AA seq
DB search
MSQGPAPADTSEPEAKVLHTKRLYRAVVEAVHRLDLILGSKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVVQLIKTNKKHIHSRSALECAYRTHLVAGIG
FYQHLLLYVQSHYQLELQRCIDWTHVTDPLAGLRKPVSASAKEMDWAQMACHRCLVYLGD
LARYQNELTGLDTERLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCIQ
SDVSFEGAAGNLQRLFDKAARTYRQLHRGETRRLPPGRKRSRDIRRLLVSFMYLQSLLQP
KGSCAEAELTGLCQAVLEDFNLCLFYVAAPPGLGPPGEEEDEEEERDGGAGGSFLPDLLV
FHMVVTCLMSVHSLKRAGSKQYGAAIAFTLALFSHLINHVNIRLQAELEEGEPAPVFQRD
GTDEPEPREPSGEGAEQEPPRPPPAPDPEPAASRKGRRASRLTSRLSCMRRRRAPARGED
QSDLSEGFESDASGESGRGSGDSGSGSGRSGDGAGAAFGADSDSDMNSQESRSDLEDMEE
EEDEEEEEEEDDDDEEEEEPEPGEQGEEAREGGGGPQAPELANGPPAPSEAVASSLQAMS
TQLFQNRRCFRLAPTFNNVVLRPPPRPPARQPCLNGGPGTPAEPASDEGTESEGSVSSGG
SGRPERSVQEKLWILAAEGLLPTVKVVLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLP
SATDLQEPGLALGPELQDLLSGWELPDPPACPLLPEDMALRNLAPLRAAHRSFRFDRAWP
PLSAVEESAVRVCCIRSFGHFIARLQGSVLQFNSEVGIFISTARAVPEAPAPPARAEQDG
VLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPRAQAAMSPYLVPDTQA
LCQHLPLLRQLATSGRFIVIIPRAVIDGLDFLKKELPGARDAIRFLEAEFKKGNRYIRCQ
KEAGKSFERHKLKRLDTDAWTLYKILDSCKQLTVPQGAGEDDPSGMVTVLTGLPLADPGA
TSGPVQAALQAAAHACVDVRNIVDFYKQWKEMG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggacccgcccccgccgacaccagcgagcccgaggccaaagtcctgcacacc
aagcggctctaccgggccgtggtggaggcggtgcatcggctggacttgattctcggcagc
aaaacggcttatcaggaggtgttcaagcccgagaacatcagcctcaggaacaagctccgg
gagctgtgcgtcaaactcatgttcctccaccctgtggattatgggcgcaaggcggaggag
ctgctgtggcggaaggtttactacgaggtcgtccagctcatcaagaccaacaagaagcac
atccacagccgcagcgcgctggagtgcgcttaccgtacccacctggtcgccggcatcggc
ttctaccagcatctgctgctctacgtccagtcccactaccagctggagctgcagcgctgc
atcgactggacccacgtcaccgaccccttggccgggctcaggaagccggtgtccgcctca
gccaaggagatggattgggcccagatggcctgccaccgctgcctcgtctacttgggggac
ttggcccgctaccagaacgagttgaccggcctggacacggagcggctggccgagcggttt
tactatcaggccctgtccgtggccccccagattggcatgcccttcaaccagctgggcacc
ctggctggcagcaagtactacaacgtggaggccacctactgctacctgcggtgcatccag
tcggacgtgtccttcgagggggcggccggaaacctgcagcggctgttcgacaaggccgcc
cggacgtaccggcagctgcaccggggagagacccgcaggctgccacccggcaggaagcgg
agcagagacatcaggcgtctcctggtgagcttcatgtacctgcagagcctgctgcagccc
aagggcagttgcgccgaggcggagctgacggggctgtgccaggcggtcctggaggacttc
aacctgtgcctgttctacgtggcggcgcccccgggcctggggccccccggcgaggaggag
gatgaggaggaggagcgcgacgggggggccggaggctccttcctgccggacctcctggtc
ttccacatggtggtcacctgcctcatgagcgtccacagcctgaagcgtgcgggctccaag
cagtacggcgcggccatcgccttcaccctggccctcttctcccacctcatcaaccacgtc
aacatccggctgcaggcggagctggaggagggggagccggcgcccgtgttccagagagac
gggacagacgagccggagccccgggagccttccggggagggcgcggagcaggagccgccg
cggccgcccccggcgccggaccccgagccggccgcctcgcgcaagggccgccgggcgtcg
cgcctcacctcgcgcctgtcctgcatgcgccgccgccgggccccggcccgcggggaggac
cagagcgacctgagcgagggcttcgagtcggacgccagcggggagtcgggccggggcagc
ggcgactcgggcagcggctccggccgcagcggcgacggggccggggccgccttcggcgcc
gacagcgactcggacatgaacagccaggagtcccgctccgacctggaagacatggaggag
gaggaggacgaggaggaggaggaggaggaggacgacgacgacgaagaggaggaggagccg
gagccgggggagcagggggaggaggcgagggagggcggcgggggtccccaggcccccgag
ctggccaacgggccgccggcccccagcgaggccgtggccagcagcctccaggccatgtcc
acccagctgttccagaaccgccgctgcttccggctggcccccaccttcaacaacgtggtc
ctccggcccccgccccggcccccggcccgccagccctgcctcaacggggggccggggacg
ccggccgagcccgcgtccgacgaggggacggagtcggaggggagcgtgtccagcgggggc
tcgggccggcccgagcgcagcgtccaggagaagctgtggatcttggcggccgaggggctg
ctgcccacggtcaaggtggtcctggactggctccgcaccaacacggacctcatcatcatg
tgtgcccagagctcccagagcctgtggaaccgtctgtccgtcctgctaaacctgctgccc
tcggccaccgacctccaggaacccggcctggccctgggccccgagctgcaggacctgctg
tcgggctgggagctgccggaccccccggcctgcccgctgctccccgaggacatggccctg
cgcaacctggccccgctgcgtgccgcccaccgcagcttccgcttcgaccgggcctggccg
ccgctcagcgccgtggaggagtcggccgtgcgcgtctgctgcatccgcagcttcggccac
ttcatcgcccgcctgcaaggcagcgtcctgcagttcaactcggaggtgggcatcttcatc
agcaccgcccgggccgtgcccgaggcccccgcgccgcccgcccgggccgagcaggacggc
gtgctgcagcaagcccaggcccagttccgcatggcccaggaggaggcgcgacgcaaccgt
ctgatgcgggacatggcgcagctccggctgcagttggaggtgtcccagctggaaggcagc
ctgcagcagccccgggcccaggcggccatgtcgccctacctggtgcccgatacccaggcc
ctgtgccagcacctcccgctcctccgacagctggccaccagcggcaggttcatcgtcatc
atcccccgggcagtgatcgacggcctggatttcctgaagaaggagctgcccggggcccgg
gacgccatccgcttcctggaggccgagttcaagaaagggaacaggtacatccgctgtcag
aaggaggccgggaagagcttcgagagacacaagttgaagcgtctggacactgacgcctgg
accctgtacaagatcttggacagctgcaagcagctgaccgtgccccagggggccggagaa
gacgacccctccggcatggtgaccgtgctgaccggcctccccctggccgaccccggcgcc
acctccggccccgtgcaggcggccctgcaggcggccgcccacgcctgcgtggacgtgcgg
aatatcgtggatttctacaagcagtggaaagagatgggctga
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