Tachyglossus aculeatus (Australian echidna): 119947586
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Entry
119947586 CDS
T10703
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119947586 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tacu04990
]
119947586 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
tacu04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
119947586 (SYNPO2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
119947586
NCBI-ProteinID:
XP_038625073
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Position
X5:complement(8961090..9126262)
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AA seq
1227 aa
AA seq
DB search
MGTLGRVGPGGYLCLSMSGGAPWGFRLQGGQDQQRTLQVAKIRSKSKASGAGLREGDEVI
AINGNPCTELTYPQVIELMESITDSLQMLIKRPSSADDETSGAEAESGNPDRLRSEVCLK
SSTLQIRPAPQTLYKELLITQVQSGDPSGGPQQEKEIVQSFRIAPRVTDPPQGLLSDKAE
EGRPGAVVELQLSLSRDGPEGTGAAGILPGAETRNSPASDPILQQGAGAKIPASPRGERE
GPPQWSGRVIQIAGGKEFQGIQGAEAEAPRFSRVEVILDCSAREKAEGTRSQAGKGSVDS
QVEGGQSEAPPSLVSFAVSSEGTEQGEDLHSERNHTRPHKHRARHARLRRSESQSEKQVK
EAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELEREEDEEEGDAGA
EAFEVTFLGTSESEVDEELPSDTDNEAQIVTFDWDSGLGDIEKKLKSGGDMQTLPDSTGK
GAVMFAKRRERMDQITAEQEGPRPGKEREAARSEATRTVTSYQRTEEEVTRSQSFTSKSS
VELSRGPSQTVQHNGFAGAAEAQRGAASNRTAKPFPGSAGRAAAAPFSPTRSVASPLSDF
PAPPPYSAITPPPDTFPTGAWSPGAGPAPPASWTAPAPWTPYEPSERIASRDERIAVPAK
RTGILQEAKRRSGTKPMFTFKDPPKVSPNPELLSLVQNVEGKRGPGAGFESGPEEDYLSL
GAEACNFMQTHASKQKTPPPVAPKPSAKASPSQPGAPASPVWAPSAAPSGQPPVFPAAPP
AQGPATSPVKVAHPPYRPPSTLNVTGPFRGPQAAVAGQNNPPKTTPSPAAGSAAQVGLAA
QLPGMSGKGAQLFAKRQSRMEKYVVDSETVQAHRARAPSPTPSLPASWKYSSNVRAPPPV
AYNPIYSPSYPLAAIKSQAPAASKATPKKAKKPLNALEVMKHQPYQLNASLFTFQPPGAK
DGPAAKPPAKLDPPPGAKQGLPPRPADAGSPVTYRVSSVYSVPAYGSQPPFHPEAVSPAS
ASPGPVGGPSSPKQESATASYFVAPRPKFSAKRGGVTAQEGGRSFSLPGRPVALVLSPTS
PLVFQPDPGPEKTSKRLTPWEAAAKSPLGLVDDAFGPRNIQESIVANVVSAARRKTMPEP
PEYWKQRVSYPPQVLKATLGRRQSSSVSAPKSNMTVPLASLPYGSQFSFAYCRTDPNLVA
LESRSDYCVSLGDCNYNPHPRGWRHQT
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgctgggccgggtgggccccgggggttacctgtgcctgtccatgagcgggggc
gctccgtggggcttcaggctgcagggcggccaggaccagcagcggaccctccaagtcgcc
aagattcgcagcaagagcaaagcctcaggagcggggctacgtgaaggggacgaagtcata
gccatcaatgggaatccctgcacagagctgacctacccccaggtcattgaactcatggag
agcatcaccgactccctccagatgcttattaaaaggccctccagcgccgacgacgagacc
tcgggcgccgaagcggaaagcgggaatcccgacaggctccgaagcgaggtctgcctgaag
agcagcaccctgcagatccgaccggcgccccagaccctttacaaagagctgctcatcacc
caggtgcagagcggagatccctccgggggcccgcagcaagaaaaagaaatagttcagagc
ttccggatcgcgccccgagtgaccgacccgccgcaggggctcttgtcggataaggccgaa
gagggaaggccaggtgctgtagtggagctgcagttgtccctctcacgtgacgggcccgag
ggcaccggcgctgccgggattctcccgggcgccgagacacggaactctcccgcctctgac
cccatcttgcagcagggagccggcgccaagatccctgcgagtccccggggtgaaagagaa
ggccctccccagtggtccggccgagtcatccagattgccggtggcaaggagtttcagggg
atccagggggctgaagcggaggcaccgcgcttctctagggtggaggtgatcctggactgc
tctgccagggagaaggcggaagggaccagatcccaagcaggaaaggggagtgttgattct
caagtggaagggggccagtcagaagcacctccttccctggtctcctttgcagtctcatca
gaaggcacagagcagggagaagatctccactctgaaaggaatcacaccagaccgcacaag
cacagggcgaggcatgcgaggctccggaggagtgaaagccagtcggagaagcaggtgaaa
gaggccaagtctaaatgcaaaagcatagcccttctgctcacggcggcccccaaccccaac
tccaagggagtgttgatgtttaagaagcgccggcagagggccaggaaatacaccctcgtc
agctacggcaccggggagctcgagagggaggaggacgaggaggaaggcgacgccggggcc
gaggccttcgaggtgacgttcctggggacgagcgaatcggaggtcgatgaagaattacct
tctgacactgacaacgaggctcagatcgtgaccttcgactgggattccggcttgggggat
attgaaaagaagctgaagagcggaggcgacatgcagacgctgccggacagcacgggcaag
ggggcggtcatgtttgccaagaggagggagaggatggatcagatcaccgccgagcaagag
ggcccgaggccgggcaaggagagggaggcggcccgctcggaagccacgaggacggtgact
tcgtaccagaggacggaagaagaggtgacccggagccagagtttcacgagcaagagttcg
gtggagctgagccgcggccccagccagaccgtgcagcacaatggcttcgctggggccgcc
gaggcccagagaggggcagcttccaacaggaccgccaagcctttcccgggatctgcgggc
cgggctgccgccgccccgttctccccgacgagaagcgtggcgagccccctgtccgacttc
cccgcccctcccccctactcggccatcaccccgccccccgacaccttccccacgggagcg
tggagccccggagccggccccgctccgccagcctcgtggacagccccggccccgtggacc
ccctacgagccgtccgagcggatcgcctcccgggacgagcgcatcgccgtgccggctaag
aggaccggaatcctgcaggaggccaagcggaggagcggcaccaagcccatgttcaccttc
aaggacccccccaaagtcagccccaacccggaactcttgtccctcgtccagaacgtggag
ggcaaacggggccccggggccggctttgagtctgggcccgaggaagactacctcagcctg
ggggccgaggcctgcaacttcatgcagactcacgcctccaaacagaagaccccccctccc
gtcgctccgaagccctcggccaaagcatccccgtcccagcccggagcgcccgcgtcgccg
gtctgggccccttcggcggcaccgtccggccagcctcccgtcttccccgccgcccccccg
gcccaaggcccggcgacatcccccgtcaaagtcgcccaccccccgtaccggcccccgagt
accctcaacgtaaccggtcccttccgggggcctcaggccgcggtggccggtcagaacaac
cctcccaagacgaccccttcgccggcggccgggagcgccgcccaggtagggctggccgct
cagctgcccggcatgagtgggaagggagcccagctgttcgccaaaaggcagtcgcggatg
gagaagtacgtggtggactcggaaaccgtgcaggcccacagggcccgagctccctccccc
acgccgtctttgccagcttcctggaaatactcctccaacgttagagctcctccgcccgtc
gcctacaaccccatctactcgccttcctacccgctggccgccatcaagtcccaggccccg
gcggcctccaaggcgacacccaaaaaggccaagaaacccctcaacgccttggaggtcatg
aaacaccagccctatcagctcaacgcctctctgttcaccttccaaccgcccggggcgaag
gacggcccggccgcgaagccgccggccaagctcgaccctccgcccggcgccaagcagggc
ctcccgccgcggccggccgacgccggctcgcccgtcacctaccgggtctcgtcagtgtac
tccgtgccggcctacgggtcccagcctcccttccacccggaggcggtcagtccggccagc
gcctcccccgggcccgtgggcggcccctcctctcccaagcaagagtcggccacggcctct
tacttcgtggctccgaggcccaagttctcagccaagaggggtggcgtcacggcccaggag
ggtggacgctcattttcacttcctgggagaccggtggcccttgttctctcccctacttct
cccttggttttccagcctgatccgggaccggagaaaaccagcaagagattaactccttgg
gaagcagcagccaagtcccctctggggctagtggacgacgcctttgggcccaggaatatc
caagagtccatcgtggccaacgtggtctcagccgcccgaaggaaaacgatgccggagcca
ccggagtattggaagcagagagtttcctacccaccccaagtgctgaaagccactctagga
agaagacagtccagctccgtatcagcaccaaagagcaacatgacggtccctcttgccagc
ctcccctatggttcgcagttttcctttgcatattgtagaactgatcccaacctggtggcc
ttggagtccagatcggattactgcgtttccctgggtgactgcaactacaatcctcaccca
agaggatggaggcaccaaacctga
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