Tachyglossus aculeatus (Australian echidna): 119947820
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Entry
119947820 CDS
T10703
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tacu04131
]
119947820 (VPS13A)
Membrane trafficking [BR:
tacu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119947820 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RasGAP_C
DUF6326
RRM_fung
Motif
Other DBs
NCBI-GeneID:
119947820
NCBI-ProteinID:
XP_038625357
LinkDB
All DBs
Position
X4:complement(7461071..7642154)
Genome browser
AA seq
3180 aa
AA seq
DB search
MVLESVVVDVLNRFLGDYVVNLDSSQLTLGIWGGDVSLKNLEIKENALSQLDVPFKVKAG
HIHKLNLAIPWTNLYTQPVEAVLEGIYLLIVPTASIKYDAEKEEKQILEARQRELRRIEE
TKQKMADTQNPQEKQDTFFEKLVTKIIKNLQVKISSIHIRYEDDITSHENPLSFGISLEN
LSLQTADQYWNPCLYDEDAKLFYKLIRLDNFCAYWNVKSQLFYHGDYHDSLRMLEDGIAS
KNVTPEGYNFVFRPISAKAKLKMNPRAEPDFSSPKMDLDVKLDDIAIELNKPQYFSVMEL
LESIDMMTQNLPYRKYRPDEPVHNHAKKWWGYAIRGILEVNIRPSMRMWSWKYIKQHRLK
VKRYKHLYKKKISSKKPGAEILIPLEEFEKTLDVFNITLARQQAEVEVKKSGFGVHKLVS
EFSDESSKGWFSWIWDWSGPSEARPEVRSGSLEELMTPEEKAKLYAAIGYSETAVDPSLP
KSYQSMKLVVTLQSMSICIREKPKKPELIRFVLGKMNTEVVQRPGAQSIRFGAIIDSFKV
TGRSNKNECPLLLSSMGESSSLLTILFETNPLDGTCDQKCIVEAQPMEIIYDAMTVNSLM
EFFRPPEKVHFSQLTSVTLMKLEEFREKTAAGVLYVIETQKVLDLRINMKASYIIIPQYG
SLRQGSSNILLLDLGHLKMISKSRSELSDIRTGWTNIEEIMSRAYDTFDIQLSSVQLLYS
KVGENWKEARKLTHSSQHILDPMHLKVEFCKAMIVTDARMPKFKLCGQLPLLSLRISDKK
LRGILELIESIPRFSSLHGASTQQRFSQVQMTPPLAATQVSQRGLPCLELSKIMESDEEE
FFDAPTSPVNESPKSEAFPLFSTQKCGISHGKFQRKESMKNLTEFKIRFELPEVIIQLCQ
FTIEDFEQPVMELNIIGLGTEIQFKTFDMSISAFLKEICLKCPEYLDEENKTVHIITTLD
NTIDDLLTMEYVKTDISGARHASAYSNIEQKLKVNFSSLDVHLHTEALLNTMNYLSNLLP
QVEKKAFMEDQIVESAEKMEILKKIASKKYKHEDIIHFQVFAELESLRFFIREQKRKISE
IKIEGLDSQVIMRQSATEIKAKLKNITILDSDEMAVYKKAVYITGREVFTFHLISYVGAT
AGAAYTNMNIVDSHIYLTVGCIQVVFVNKFLSSVLAFVDNFQAAKKAVTEATVQAAGKAA
TGVKELAQRSYRMALDINVKAPIVVIPQSPVSQNVLVVDFGLITIKNKFYMSSKMKYNPP
PIIDFIMIKLSEMKLYRSQFISNSLQEVLELLQPLNLEVDVERNLSSEWYHDVPDIKITG
NLKPMQLILSQEDITTVLRTLHENVWDSYVDDDSSSVFKDQTSPTGFAKNVTQRSKTTVV
TAAVVEVHPKQEKAKTTLSMNFRIDSLTLILYSGTTEEFFPLQKRNALLILAEFKLDQIL
STVRLSTDSSIFASFILKNCGLEDKRVHVQKATPRMMGMTIGYETKDMVDVTYKHNRDGA
VIDAVIQEIYLCASVEFLQTVADIFLQANEKSAAARRLIQSLPTKDQGSIQVVPKLDINV
MVRNPEIIFVADLTRSDAPSLVVTTQCELSVRNTPEVQKITAIIKALQVQACPFLQGEKD
GNITTVLQPCDFFFQNIQAGTDPQVIDMSIKSLTLKVSPIIINTVITITEALYPDSNTLE
KAASSTRLNLWEKMDTKKLKMWFLEESNESDVAETVPELIPKGEMMKVTVESVFIVLEAG
IGHRTVPMLLAKSSLLGQAKNFRSLIHFHCKLQLEVHYFNEMFGVWEPLLEPVEIEDTED
FRPWNLGIKMKKKSKRAIVDSDSEEENYKVPEYKTSITFFSKDQLNITLSKCGLIMMNNL
GQAFANAASGSKDIYTKDQAPFIVINSLGLTISISTSDHFQIVGAPRVKAFELKNEETID
LDYVRSSDSDQFTAMTSLSSKLFFILITPYNHSTADRIPLTKVGRFLYTVRHRESGVERS
VVCQIDTVEGSKMVTMRSPLQIRNHFSIPLNIFEEDTFLGTALPDNEFNIPLTAYRSVLF
LKPGGENYEKCEAITFEEIINNSGVLIQKKCQILHEENTSFIINVVSVEDSLSSLSVYSN
DGWDLPYVIHLWPPILLRNLLPYEMAYSLEGSGHDLLNLEEGCSAQLYTAELDQARIHLE
LLDYLDRDWKSDYEVKSEQSDISFITFTSITELETTELDIAIHITYNTGQTVVAFHSPYW
MVNKTGRLLQYKADGIHRKHPPDYRKPILFSFQPKNFFNNNKVQLLVTDSDLSDPFSIDT
VGSHGSVKCRKQKIEYQVGITIDLSSFNLTRIVTFTPFFMITNKSNYQVKVSEEGSGKWM
DVGLEQCIPFWPASAANKLLIQVENSEGLIKKLNFTKQENCILLHLGNKLGGIIVDVNVA
EHSTVITFTVYHDGAAPFLLINHTNNEVIEYRQSSRSELEDCLPAGKATFYTWADPVGSR
KLYWKCGKSHGEVTQKDDMMSPINMGDKKTIYLVSFFEGLQRIVLFTEDPKVFKVAYESE
KAEIAEQEIVVALQNVGISLVNNYMKQEVAFIGITSSDIIWESKPKKKSRWKPLSIKQNE
KLEKEFRDYTEPSPSEDKIIELEENIPVYLTPSGSNMKILRPNVIPLRRNYLPAIKVEYS
TSEHQKAFRVQIFRIQIQNQINGAVFPFVFFPVKPPKTVALDSAPRPFAEVSIVMRSAGH
SKIARIKYFKMLIQEMDLRLDLGFLFALADLFTEAEVTEKLEVELFRKDIEFFQEEFKTI
QLTDTSQVSLYEYFHISPIKLHFSVSFRLGGEETVKDERQGRLIPVNSVNILLKSIGATL
TDVQDVVFKLAFFELNYQFHTSPQLQYEVIKHYSKQAIRQMYVLLLGLDVLGNPYGLIRD
FSEGVEAFFYEPYQGAIQGPEEFIEGMAIGLKALVGGAVGGLAGAASRITSAMAKGVAAI
TMDEDYQQKRRENMNTKPAGIREGITRGGKGLVTGFVSGITGLVTKPVKGAQKGGASGFF
KGVGKGLVGAVARPTGGLIDMASSTFQGIKRATESYEDVESLRPPRFLDEDGVIRPFRLR
DGTGNQILQKMEDGRYSNLRYFTHSMVNNTDLFMITKTGVLFVTEGLFGQLTCEWQYSFQ
EFTKEPFIIQDRRLRIEAKERIKSVFHAKEVGKIVNFKTSDDAKWVLGKLDEVRELQSEL
NT seq
9543 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgagtcggtggtcgtggacgtgctgaaccggtttctaggggactatgtggtc
aacctggacagttcccagctcactctgggcatctggggaggtgatgtatcacttaagaac
cttgaaattaaagaaaatgcattgagccaattggatgtgccttttaaagttaaagctgga
catatacacaaacttaacttggcaattccatggacaaacctttatactcaacccgttgag
gcagttttggaaggaatttatttgctcattgtgcccacagccagcataaaatatgatgct
gaaaaagaagagaaacaaatcctagaagcaaggcaaagggaactaaggagaatagaagaa
acaaaacagaaaatggctgatacacaaaatccacaagagaaacaggatactttttttgaa
aaattagtcactaaaatcatcaaaaatcttcaggttaagatctccagcattcacatccgc
tatgaagatgatattaccagtcatgaaaatccgctgtcatttggaatttccctggaaaat
ctcagtttgcagacagcagatcaatactggaatccatgtctatatgatgaagatgccaag
ttgttctataagctcatccgactggataacttttgtgcctattggaatgtaaagtcacag
ttgttttaccatggtgattatcatgattctttgagaatgttagaggatggcattgccagc
aaaaacgtgactccagaaggctataattttgtatttcgtcctatatcagccaaagccaaa
cttaaaatgaatccgcgagctgagcctgatttttcttcaccaaagatggatttggatgtt
aaactagatgatatagccattgaattgaataagccacagtacttcagtgtcatggagctc
cttgaatctattgatatgatgactcaaaatctaccatataggaaatacagacctgatgaa
cccgtgcacaatcatgccaagaaatggtggggatatgccataagaggtattcttgaagta
aatatccggccttccatgcgcatgtggtcgtggaagtacattaaacagcacagactaaaa
gtgaagaggtacaaacacctgtataagaaaaaaatatcaagcaaaaagccaggtgcagaa
attctaatccctttggaggaatttgaaaagactttggatgttttcaacattactttggca
aggcaacaagcagaagttgaggtaaagaaatccggattcggggtacacaaacttgtttca
gaattttcagatgaaagttccaaaggctggttcagttggatatgggattggtcaggtcct
tctgaggcaagaccagaagttagatctggaagtcttgaggaattgatgacacctgaagaa
aaggctaaattatatgccgcaattgggtatagtgaaacagctgttgacccttcattgcca
aaatcataccaatccatgaagttagttgtcaccttgcaaagcatgtccatttgtatacgg
gaaaagccgaagaaacctgagttgataagatttgtactaggaaaaatgaacacggaagta
gtacagcggccaggagcccaatcaatcagatttggagccataattgactcatttaaagtt
actggccggtcaaataaaaatgaatgcccacttttactttcttcaatgggagaatcgtct
tccctcttgacaattttatttgagaccaatccgttagatggaacctgcgatcagaagtgt
atagtggaagctcagcctatggaaattatatatgatgcaatgacagtgaacagtttaatg
gaatttttccgaccccctgaaaaagtacatttctcccagttaacttcagtgactctgatg
aagcttgaagaatttcgtgagaagactgcagcaggagtgttgtacgtcattgaaactcag
aaagttcttgatctcagaattaatatgaaggcttcatacattattatcccacagtatggc
tccttaagacaaggttcatcaaatatacttctcttggatcttggtcatctaaagatgata
agcaaaagtcgctccgaattgtcagacatccgaacaggctggaccaatattgaagaaatc
atgtctagagcttatgatacttttgacattcagctgagtagcgtacagctactttatagc
aaagttggtgaaaactggaaggaggctcgaaagctcacccattcttctcagcatattttg
gatcctatgcacctcaaggtggaattctgcaaggccatgattgtcactgatgcgagaatg
cccaaattcaaactttgtggtcagctacctctgctttctctgcgaatctcagacaaaaaa
ttgagagggattttggaattaattgaaagtattccaagattctcaagccttcatggtgct
tctacccagcaaagattttctcaagttcaaatgacccctccacttgcagcaacacaggta
tcccaaagaggacttccttgcttggaactttctaaaattatggaatctgatgaggaggaa
tttttcgatgcaccaaccagtccagtgaatgagtcaccgaaaagtgaggcctttcctttg
ttctccacccagaaatgtggtattagtcatggaaaatttcagaggaaagagtccatgaag
aacctcactgaatttaaaataagatttgagttgcctgaggttataattcagttgtgccaa
tttaccatagaagactttgaacagcctgtgatggagttgaatatcattggattaggcaca
gaaattcaatttaaaacatttgatatgagcatatctgcatttctgaaggaaatctgccta
aaatgtccagagtacctagatgaagaaaacaagacagttcatatcattacaacgttagac
aacaccatagatgatctgctgacaatggaatatgtgaaaaccgatatttctggagctagg
catgcctcagcctatagcaatattgaacagaagttaaaggtgaatttctcctccttggat
gtacatttgcacactgaagcactacttaataccatgaattatttaagtaatctccttcca
caagtggaaaaaaaagcattcatggaagatcaaatagtagaaagtgcagaaaaaatggaa
atacttaaaaaaatagcatcaaaaaagtacaagcatgaagatatcatacattttcaggtt
tttgcagaactggaaagtttacgtttctttattcgagagcaaaagcgcaaaatttccgaa
attaagattgaagggcttgattcacaggtgattatgagacagtcagcaactgaaataaaa
gcaaaactaaagaacatcactatcttggattctgatgaaatggccgtatataagaaggct
gtttatatcactgggagagaagtctttacctttcatctgatttcgtatgtgggtgctact
gctggtgctgcatatacaaatatgaacatagttgacagtcacatttatctaactgttggt
tgcattcaagtggtttttgtcaacaaatttctttcttcagtgttggcttttgttgacaac
tttcaagctgctaaaaaagccgtgacggaagcaactgttcaggcagcaggaaaagctgcc
acaggtgtaaaggaactggcccagagaagttaccggatggcattagatatcaatgtcaag
gcacccattgtggtcattccacagtcaccagtgtcccaaaatgttctggtggttgatttt
ggtctgatcacaataaagaacaaattctacatgtcgtcaaagatgaagtataaccctcca
cctattattgattttataatgataaaactgagtgaaatgaaactttacaggtcccaattt
ataagcaattcattgcaggaggtacttgagcttctgcagcccttaaatctagaagttgat
gttgagcgaaacttatcctctgagtggtaccatgatgttccagacattaaaataactggg
aaccttaaacctatgcagttaattctcagccaagaagacataaccactgtcttaaggaca
ctgcatgaaaatgtttgggacagttatgttgacgatgactcttcatctgtattcaaagat
caaactagccctactggttttgctaagaatgtcacacagcggtcaaaaacaactgtagtg
acagctgctgtagtggaagttcatccaaaacaggaaaaggctaagactacactgagcatg
aacttcaggattgactccctcactctgatactgtatagtggaactactgaagagtttttc
cctttacaaaagcggaatgctctactgatacttgcagaatttaaattggatcagatttta
tccactgtccgcctctcaacagacagctcgatatttgcttcatttattttaaaaaactgt
ggtttggaagataaacgggtgcatgtgcagaaggcaacaccgagaatgatgggaatgacg
attgggtatgaaacaaaagacatggtggatgtaacttataaacataacagagatggagct
gtcatcgatgcagttattcaagaaatatatctctgtgctagtgtggaatttctgcagact
gttgcagatatatttttgcaggccaatgagaaaagtgccgctgcacggagactcatacaa
tccttgcccactaaagaccaagggtctattcaagtggtcccgaaacttgatattaatgtt
atggttcgaaatcctgaaatcatatttgtggctgatttaaccagaagtgacgctccttcg
ttagtagttactacacagtgtgagctctccgtgagaaacactccagaagtgcaaaaaatt
actgctatcattaaagctcttcaagtacaagcttgtccatttcttcaaggagaaaaagat
ggcaacatcactactgttttgcagccctgtgactttttttttcaaaatattcaggcaggt
accgatccgcaagtgattgatatgtctataaagtccttgactctaaaggtttcaccaatc
atcataaataccgtgattaccattacagaagccctttacccagattccaacactttagag
aaagcggcaagttcaactcgactaaatttgtgggaaaagatggatacaaagaaactaaaa
atgtggtttctggaggagtcaaacgaaagtgacgtggctgaaactgtacctgaattgatt
cccaaaggagaaatgatgaaagtgaccgttgagtctgttttcatagttcttgaagctgga
atcggtcatagaactgtgcctatgcttttggctaagtcatctttattggggcaagccaaa
aactttcgtagtctgatccacttccactgtaaacttcaactagaggtgcattacttcaat
gagatgtttggtgtatgggaacctctgcttgaacctgtagaaatcgaagatactgaagat
ttcaggccatggaatcttggaatcaagatgaagaagaaatctaaaagggccattgttgat
tcagattctgaggaagaaaactacaaggtgccagaatataaaacgagcattactttcttt
tcaaaggaccaactgaacattactttgtctaaatgtggccttatcatgatgaataattta
ggccaggcatttgcaaacgccgccagtggatctaaagatatttacaccaaagatcaggcc
ccatttatagttataaattctctgggactcaccatctcgatctcgacaagtgatcacttt
caaattgttggtgcacctagggtaaaagcattcgaattgaaaaatgaagagactatagat
ctggattacgtcagaagtagtgacagtgatcagttcactgcaatgaccagtttaagcagc
aaactcttcttcattctgatcactccttataaccactctacagctgacagaattccacta
accaaagtaggtcgatttctctacactgtccgacacagagagtctggtgttgaacggtct
gttgtttgccaaattgacacagtggaagggagtaaaatggtgacaatgcgctccccttta
cagattagaaatcatttttcaattccactgaatatttttgaagaggacacattcctcgga
actgctttaccagacaacgaatttaatattccattgacggcttaccgatcagtacttttt
ttgaaaccaggtggtgagaattacgaaaagtgtgaagcaattacctttgaagaaattata
aataattctggagtcctcatacagaagaaatgtcaaattctgcacgaagaaaacacatca
tttatcattaacgttgtttcagtagaagatagcttatcctcactttcagtgtattctaat
gatggatgggatttaccctatgtgatccatttatggcctcccattcttctccgcaacctc
ctgccttacgaaatggcttactcccttgagggatctggtcatgatcttctaaatctagag
gagggctgttcagcccaactttatactgcagagttggatcaagccaggatacacttggag
ttacttgactatcttgatcgtgattggaaaagtgactacgaagtaaagtctgagcaaagc
gacattagcttcatcaccttcaccagcatcactgagctagaaacgacagaattggacatc
gccatccatataacctacaacactgggcaaacagtcgttgcctttcacagcccctattgg
atggtgaataaaacaggccgattactgcagtacaaagctgatggcattcatcggaaacac
ccccctgattacaggaagccaattcttttttcttttcaaccgaagaactttttcaataat
aacaaggtgcagcttctggtcacagatagtgatttgtcagatccattttcaattgacaca
gttggcagtcacggatctgttaaatgtagaaaacagaagatagaataccaagttggtatc
accatagacctcagtagtttcaaccttacgagaattgtaacattcacccctttctttatg
atcacaaacaaaagtaattatcaggtaaaggtgtctgaagagggcagtggaaaatggatg
gatgttggtttggagcagtgcatccccttctggcctgccagtgctgccaacaaattgctt
attcaagttgaaaatagtgaaggactcataaagaaattgaattttactaagcaggaaaat
tgtattctattacacctgggcaacaagcttggcggcattattgtggatgttaacgtggcc
gagcactctactgtaattacttttacagtttaccatgatggagcggcaccatttctccta
ataaatcacaccaacaatgaggtgattgaatataggcagagttctcgcagtgagttggaa
gattgtctccccgctggcaaagcaacattttacacttgggccgatccagtgggctctcgg
aaactttactggaaatgtggaaagagccatggtgaagtaacccagaaggatgatatgatg
tctcctataaatatgggtgacaaaaagaccatatatttagtgtcattctttgaaggctta
cagcgcattgttcttttcactgaagatcctaaagtctttaaagtggcatatgaaagtgaa
aaagcagagatagcagagcaagaaattgtagtagcattgcaaaatgttgggatttctctg
gtcaataactatatgaagcaagaagtggcctttattggcatcacaagctcggacatcatt
tgggagagcaagcccaagaaaaaatcgagatggaagccattgagtataaaacaaaatgag
aagctggaaaaagagtttagggattacactgagccatcaccttctgaggacaagatcatt
gagttggaagaaaatattccggtttatttaacacctagtggtagtaacatgaaaattctt
cggccaaatgttataccactaagaagaaactacctaccagccattaaagtggaatatagt
acttctgaacatcaaaaagccttcagagtgcaaattttcaggatacagattcaaaaccag
ataaatggagctgtctttccctttgtgttttttcctgttaaacctccaaagacagttgcc
ttggattcagctcccaggccatttgcagaggtcagtattgtcatgagatctgcaggacat
tccaaaattgcacgtattaaatacttcaaaatgttgatccaagaaatggatctcagatta
gaccttggctttctctttgctctggctgacctttttacagaagctgaggtgactgaaaaa
ctcgaggttgagcttttcagaaaggacattgagtttttccaggaagaattcaagacaatc
cagttaacagacacctcacaagtcagtctgtatgaatactttcatatctctcctatcaag
ttgcatttcagtgtttccttcaggttgggtggagaggaaaccgtcaaagatgaaaggcag
ggaagactgataccagtgaattctgtgaacatcctgttgaagagtattggtgcaactctt
acagatgtacaagatgtagtgttcaagctggctttctttgaacttaactatcagttccac
actagcccccaattacagtatgaggttataaagcactattctaaacaggccattagacaa
atgtatgtccttcttcttggcctcgatgtattaggaaatccatatgggttaattagagat
ttctctgaaggagtggaagcattcttctatgaaccatatcagggagccatccagggtcct
gaagagtttatagagggaatggcaataggacttaaggctctagtagggggagctgttggt
ggccttgctggggcagcatcgagaatcactagtgcaatggccaaaggggtagcagcaata
acaatggatgaagactaccaacagaagagacgagaaaacatgaatacaaaaccagctggc
atcagagaaggcatcactcgaggaggaaaaggcttagtaactggctttgtaagtggcata
acgggattagtgacaaaacccgtcaaaggagcccagaaaggaggagcatctggtttcttc
aaaggtgttggaaaaggcttagtaggagcagtggcaaggccgactggaggacttatagac
atggcgagtagcacctttcagggaattaaaagagctacagaaagttatgaggatgtggag
agtctacgacctcctaggttccttgatgaggatggagttatcagaccattcaggctcaga
gatggtactggaaatcagatattacagaaaatggaggatggaagatattccaatcttaga
tactttacacattccatggtcaataatacagatttattcatgataaccaaaaccggcgtg
ctgtttgtgaccgaaggattgtttgggcagctgacttgtgagtggcagtacagttttcag
gagtttaccaaagagcctttcattatccaagacagaagattacgcatcgaagccaaggaa
cgaatcaagtctgtatttcatgccaaagaggttggaaaaatagttaatttcaagacttca
gatgatgcaaagtgggtcctcggcaagctggatgaagtgagagagcttcagtctgaattg
taa
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integrated database retrieval system
