Tachyglossus aculeatus (Australian echidna): 119947946
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Entry
119947946 CDS
T10703
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03082
ATP-dependent chromatin remodeling
tacu04714
Thermogenesis
tacu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119947946 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119947946 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119947946 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tacu03021
]
119947946 (SMARCA2)
03036 Chromosome and associated proteins [BR:
tacu03036
]
119947946 (SMARCA2)
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119947946 (SMARCA2)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119947946 (SMARCA2)
Chromatin remodeling factors
BAF complex
119947946 (SMARCA2)
PBAF complex
119947946 (SMARCA2)
GBAF(ncBAF) complex
119947946 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119947946
NCBI-ProteinID:
XP_038625553
LinkDB
All DBs
Position
X4:15997415..16177249
Genome browser
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSAPHPLPTM
GSADFPQEGIHQMHKAIDGMHDKGMVEEMHCSSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPMIPGDPQAMSQPTRGPSPFSSVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGIQQQQPPLVNYNRPSGIGMHPIAGPG
PAGGPPSGMPGHTATMTPKPWTEGQAPDMSGSNPPQKLAVPPPSGRPSPAPPPAQPAVAM
PGPSVSQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELE
NLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQT
LREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVAT
WHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTN
LVWEHKQAQAAKEKKKRRRRKKKAEENAEGMESGLGPDGEPIDESSQMSDLPVKVTHTET
GKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSEYEEEDDEEESSRQETEEKILL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIAEKVEKQSALLING
SLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNDPGSQFFIFLLSTRAGGLGLNLQAADTVV
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVEKDPGKEDVEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLSDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDD
EDDDEDESESESKSVKVKIKLNKKDEKSRDKGKGKKRQSRGKAKPVVSDYDSDEEQDEND
QSEASGTDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccaacggatccaggtgccatgcctcaccctgggccttcaccagggccaggc
ccctcccctggaccgattctgggacctagtccaggaccgggaccgtcaccggggtcggtt
cacagcatgatgggaccaagtcctgggccaccaagtgccccacatccattgccaacgatg
gggtctgctgattttccacaggaaggcatacaccaaatgcataaggccattgatggcatg
catgacaaaggaatggttgaagagatgcattgtagctccatgaagggcactggtatgcga
ccacctcatcctggaatgggccctcctcagagtccaatggatcagcatagtcaaggttac
atgtctccacacccgtcccccttgggagcgccagagcatgtgtccagtcccatgtcagga
gggggtccaactcccccccagatgccgccaagtcaaccgggacccatgataccgggagac
ccacaagcgatgagccagcccaccagaggtccttcgcctttcagttcggtacaattgcat
cagctcagagctcaaattttagcttacaaaatgttggcgaggggccagccacttcctgaa
accctgcagcttgccgttcaggggaagaggacattgcctggcattcagcagcagcaaccg
cctcttgttaactacaacagaccatctggtatcgggatgcatccaattgcaggtccaggt
ccagctgggggacctccatctggaatgccaggacacacagctacaatgactcctaaacca
tggactgaaggccaggccccagatatgagtggtagcaatccaccccagaagcttgcagtt
cctcctccaagtggaagaccgtcacctgctcctccacctgcgcagcctgctgttgctatg
cctggaccttctgtatcccagccgactcctgggcagccttcacctattgtccaactccag
caaaagcagaaccgtatcagtcccattcagaaaccgcaaggactggatcctgtcgaaata
ctccaggagcgagaatatagacttcaggctcgcatagctcacagaatccaagagttagag
aatttacctggttctttgccaccagatttacgaaccaaagctacagtggaactgaaggct
ctgaggttactgaatttccagcgtcagctaagacaagaggtagtggcctgcatgcgtcgt
gacacaaccctggagactgctctcaactccaaagcttacaaacgcagcaagcggcaaact
ctgcgagaagcccgcatgaccgaaaaacttgagaagcaacagaagattgagcaagagagg
aagcgcagacagaagcaccaggaatatctgaacagcatattgcagcatgcaaaagatttt
aaggaatatcatcggtctgtggccgggaaaattcagaaactttcgaaagctgtggcaact
tggcatgctaacactgaacgggagcagaagaaagaaacagaacgaattgaaaaggaaaga
atgaggagactcatggctgaagatgaagaaggctaccggaaattgattgaccaaaagaag
gacaggcgtttggcttatcttctacagcagacagatgagtatgtggcaaacttgactaat
ttggtatgggagcacaagcaagcacaagcagccaaagaaaagaagaagaggcggcgaaga
aagaagaaagcagaagagaatgcagaaggaatggaatctggcctcggaccggatggagag
cctatagatgaaagcagtcaaatgagtgaccttcctgtcaaagtgactcatactgaaacg
ggcaaagttctgcttggaccagaagcacctaaagcaagtcagttagatgcttggttggaa
atgaatcctggttatgaagttgctcctcgatctgatagtgaggaaagtgattctgaatac
gaggaagaggatgatgaagaggagtcaagtagacaagaaactgaagagaagatactcttg
gatccaaatagtgaagaggtttctgaaaaagatgctaaacagatcattgagacagccaaa
caagatgtggacgatgaatacagcatgcagtatagtgctagagggtcccagtcctactat
accgtagcgcatgcgatagcggagaaggtggagaagcagtcggctcttctcattaatggc
tcactaaagcattatcagctccagggcctggaatggatggtgtcgctgtataataacaat
ttgaatggaattttagctgatgaaatggggttaggaaagaccatacaaactattgcactc
atcacttatctgatggagcacaaaagactcaatggcccctatctcatcatcgttcccctt
tcgactttatctaactggacatatgaatttgacaaatgggctccttctgtggtgaaaatt
tcttacaagggcacaccagccatgcggcgttcccttgttcctcagctccggagtgggaag
tttaatgtccttttgactacttatgagtacattattaaggacaagcacattcttgccaag
attcgatggaaatatatgatagttgatgaaggccatcgaatgaagaatcatcactgcaag
ttgactcaggtcttgaacacccactatgtggctccaagaaggatactcttgactgggacc
ccactgcaaaataaactgcctgaactttgggcccttctcaactttctccttcccaccatc
ttcaagagctgcagcacatttgaacagtggttcaatgctccatttgccatgactggagaa
agggtggatttgaatgaagaagaaactattttgatcatccggcgtctccacaaagtgctt
agacccttcttgctgaggagactgaaaaaggaagttgaatcccagctgccagaaaaggtg
gaatatgtgatcaaatgtgacatgtccgctctgcagaagattctgtatcgccatatgcaa
gccaagggaattcttctcacagatggttcggagaaagacaagaaggggaaaggaggggct
aagactcttatgaacacaatcatgcaactaagaaagatatgcaatcacccatatatgttt
cagcacattgaggagtcctttgctgaacatctgggctactcaagtggtgtcatcaatgga
gccgagttatatcgggcctcagggaagtttgaactacttgatcggattctaccaaagtta
agagccactaaccaccgtgtattactcttctgccaaatgacttcactcatgaccattatg
gaggactactttgcttttcggaacttcctttacctacgccttgatggcactacaaagtca
gaagatcgtgctgcattgctgaagaagttcaatgaccctggttcacagttcttcatcttt
ttactgagcacgagggcaggaggtctgggattgaatcttcaggcagctgacactgttgtc
atttttgacagtgactggaatcctcaccaggacttgcaagcccaagatagagctcaccgg
attggtcagcagaacgaggttcgcgtactaaggttgtgcaccgtaaatagtgtggaggaa
aagattctggccgctgccaaatacaagctcaatgtagaccagaaggttattcaggctggc
atgtttgatcaaaaatcttcaagccacgagcggagggcttttctacaagccatattggag
catgaggaggaaaatgaggaagaagatgaagttcctgatgacgagactttgaatcagatg
attgctcgacgggaggaagaatttgatctctttatgcgtatggacatggaccgacgcagg
gaggatgcccgaaatccaaagcgcaagccgcgcttgatggaggaagatgagcttccctct
tggatcattaaagatgatgctgaagtggaaaggcttacttgtgaagaagaggaagaaaaa
atatttggtcgagggtcccgccagcgcagggatgtggactacagtgatgccctcaccgag
aagcagtggctacgggcaattgaagacggcaatttggaagaaatggaagaggaagtgcgg
cttaaaaaacggaaaagacgaagaaatgtggagaaagatcctgggaaagaggatgtggag
aaagctaagaagagaaggggcagacctccagctgagaaattgtcacctaacccacccaaa
ctgacaaagcagatgaatgccattattgatactgtaataaactacaaagacagttcagga
cgtcagctaagtgaggtcttcattcagctcccatccaggaaagaattgccagaatactat
gaattaattaggaagccagtggacttcaaaaaaataaaggaaagaatccggaatcacaag
taccggagcctcagtgatttggagaaagatgtcatgctactttgtcacaacgcccagacc
ttcaacttagaaggatcacagatctatgaggattccattgttctccagtcagtgttcaag
agtgcccggcagaaaattgccaaagaggaggagagtgaggatgaaagcaacgatgatgac
gaggacgacgacgaagatgaatccgagtctgaatcaaaatctgtaaaagtgaagattaag
ctcaacaagaaagacgagaaaagccgagacaaagggaaaggcaagaaaaggcagagccga
ggcaaagctaaacctgttgtgagtgactatgatagtgatgaggaacaggatgaaaatgat
caatcagaagcaagtggaactgatgacgagtga
DBGET
integrated database retrieval system
