Tachyglossus aculeatus (Australian echidna): 119948762
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Entry
119948762 CDS
T10703
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tacu03036
]
119948762 (SHOC1)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
119948762 (SHOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_ATPase
SHOC1_PDDEXK
SHOC1_HhH_tandem
SHOC1_2HhH
Motif
Other DBs
NCBI-GeneID:
119948762
NCBI-ProteinID:
XP_038626188
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All DBs
Position
X3:13797286..13902742
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AA seq
993 aa
AA seq
DB search
MPFYITVRVTGTVKKTPQKVLNRTKLASSEKNRTFRAGPDTDAIALKCFGSASTWCNTLL
NTDGNHRAEATTSKVDTLTGEEITVQFNNNDRQLSVFWGLPPRPALREPDENYKNSMLSA
PKEDNNFSPVERLAEESSQHPGGRTVFTSLHWLCAFPSVIHVSHYKILKDRSAVNEKSPP
STQTPLSKLPSEDPLPENNDLSSCRNTLTGAPQEKPDSAHEVGKKKEKIFPSSNPSPSID
VRGMDLPDQNIKQECSKVRPTPYPGLFIDEEMIFKSNMAGYQKWLPFMKTFLIQIQGYVM
MDPAPESQQNHFREPVAFPSIPEVCENKVESDTFKERFCGQPQKEPSILPTTSKSTKAAD
LKQADTLSASEFKVPEKISRIVRNKERNKTGQRGREKNTAKEVNRLKENQEKGLENRSLG
IKQTHPAHANEPPKNINYPKKLESTVIYVEIKASASQCDAYALLEASATPLMRELTDLAV
LSEENGNFATVTFDQVRVFLQLQEKKVNANLQQNRQDEKEKMLLKLVALLNFLVTVRDIL
LICNLYSALEYISTIKSAFKRVLGSPLEDICRKLEIVQFIKKKKPEANHKIKELELQLLK
WIRSINTQNKFKVLIISRLKSQDETYVLYNCLRGIGLSVLVWATESTFLELNLLDCLRKC
SCLLVCSTHIGNDFPWTHFSFVIEYNYSEKFNFSELCRCLKINYMAFRCTLPDSILQKSV
TLNVFSGFLLEIQVPYVFLFMKSKGWNTVPEVLRVLEANYDITLWERPCSEALQCLETPD
RYVLVTVDVDTAIILQDMEELNCPGAPDNIMLKVIALSVQYTNFWIIFYPKEKQHSGFCL
SENILRHLAVLHASLVSPWMKTEEVEVKLVLVPEAKEAATLTRQIADQILTTSSRSVFEF
LDKSWLSPSLSKEEEFLLSFPCVNPLVAQMMLYQAPSLYRLVKASLRQLEQLLPEVPPKV
LQLFKAITSTYNFAPLHLAGSPYLPASRGRDLG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttacatcacggtgagagtaacaggaaccgtgaagaaaaccccccaaaaagtc
cttaacaggactaaactggccagttcggaaaaaaataggaccttcagagcagggccggac
acagatgctattgccctcaagtgttttggttcagcatctacttggtgcaacacgctgtta
aacacagatgggaatcacagagccgaagcaacgacgtccaaagtggacacgctcacaggg
gaagaaataacagtccagttcaacaacaacgaccgtcaactctcggtcttctggggattg
ccccctcgcccggccctgcgggagccggatgagaattataagaattcaatgctttcagct
cccaaagaagataataatttttctcctgtggaacgtttggccgaagagtcatctcagcat
ccaggaggccgcactgttttcacatccctccactggctgtgcgcgtttcctagcgtgatc
cacgtgtcccattacaaaatcttgaaggaccgttcggcggtaaatgagaagagtccgcca
tctacgcaaacccccttgagcaaactgccctcagaggatcccctccccgagaacaatgac
ctttccagttgcaggaacactctcactggcgcaccccaagaaaaaccagattcagctcat
gaggttggtaaaaaaaaggagaaaatctttccaagttcaaatccatccccttcgattgac
gttcgagggatggatttacctgaccagaatatcaagcaagaatgctcaaaagtccgccca
acaccatatccaggtctctttattgacgaggaaatgattttcaagagtaacatggcaggg
tatcagaagtggctaccttttatgaaaaccttcttgatccaaatccagggatacgtgatg
atggatcccgccccagaatcccaacaaaaccatttcagggagcctgtggcttttccgagc
attccggaagtctgtgagaacaaagtggaatcagacacgtttaaagagagattttgtgga
caaccacaaaaagagccgtctattttaccgactacatcaaaatccacgaaggctgcagat
ctgaagcaagctgatactctgtcagcctcagaatttaaggtgccagaaaaaataagccgt
atagttagaaataaagagcgcaacaaaacaggtcagcgggggagagagaagaacacggca
aaggaagtaaatcggcttaaggagaaccaagaaaaagggttggaaaatcggtctctgggc
attaaacagacacatccagctcatgcaaatgaacccccgaagaacataaattatccaaag
aagttggagagtaccgtcatttacgttgaaataaaagcatcagccagccaatgtgacgca
tacgctctcctagaggcatcggccaccccgctcatgagagagctcacagacctcgctgtc
ctgtctgaagaaaacgggaatttcgccaccgtcacctttgaccaagtcagagttttccta
cagctgcaggagaagaaagtcaatgctaatttacagcaaaatagacaagatgaaaaagaa
aagatgttactgaaactggtggccctgctgaattttctggtaacagttcgagatatcctg
ctaatctgtaacttgtattcggcattagaatatatatccacgatcaaaagtgccttcaag
agagttttaggttcccctttggaagacatctgccgtaagctggagattgtgcagtttatc
aagaagaaaaagcccgaagccaaccacaagattaaagaattggaactgcagctgttaaag
tggattcggagcattaatacgcaaaataaatttaaggtactgataatatcgagactgaaa
tcacaggatgaaacttatgtcctttataattgccttagaggaataggtttaagtgttctc
gtttgggcgactgaaagcactttcctggagttaaatctcttagattgtttgagaaaatgt
tcctgccttctcgtgtgcagcacgcacattggaaatgacttcccctggactcatttctca
tttgtgatcgaatacaactattcagagaagtttaacttttccgagttgtgcagatgcctg
aaaatcaattacatggccttcaggtgcactctccccgactccattttacagaaaagcgtg
actctgaacgttttcagcggctttctcctggagatccaggttccctacgtgttcctgttt
atgaagtcgaaagggtggaacaccgtgccggaagttcttcgggtcttagaggccaactat
gatatcactttatgggagagaccttgcagcgaagcgttacagtgcctcgaaactccagat
cgctacgtgctggtgaccgtcgacgtggacaccgccataatccttcaggacatggaggaa
ttaaattgtccgggggccccggataacatcatgttgaaagtgatagctctatcggttcag
tacaccaacttctggatcattttctatcccaaagagaaacagcattcagggttctgcctc
tcagaaaatattctccgccacctagcagtccttcatgcatctttggtttcaccctggatg
aaaactgaagaagtggaagtgaagcttgttcttgtgccggaagcgaaagaagcggccaca
ctgactcgtcagattgctgaccagattctgacaacctcttcgaggagcgttttcgagttt
ctggacaaatcctggctctccccttcactaagtaaggaggaagaattcctgcttagtttt
ccatgcgtcaatcccttggtggctcagatgatgctgtatcaggctccgtcactgtaccgg
ctggtgaaagcatccttaaggcaacttgaacagctcctgcctgaagttccaccgaaggta
ttacagctgttcaaggccatcacctcgacgtacaattttgcgccgctacacctagcggga
tcgccgtacctcccggcctcccgcggccgagacttgggataa
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