Tachyglossus aculeatus (Australian echidna): 119949097
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Entry
119949097 CDS
T10703
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Brite
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119949097 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119949097
NCBI-ProteinID:
XP_038626498
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Position
X2:complement(21842945..22040055)
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AA seq
1802 aa
AA seq
DB search
MSDDLKKRFEFPNTLVQSQAVSYLIAAVIKENVSKKICESTLQTPALTLLWEKCCSDNVI
VRSTCCEGLVALVAQDYAEFSYILDGILNLIPSARNTHDLVKAIVKLLQMQALKVEKCGE
KSTQELYKISYPPHPLITVLEYRPDCWPVLLQQLTLFFQHCPERAETSCVHVMAPFLQYL
YCEPSQLHEYSQLRMGLLKPLFRSQGPWDKEKPSTLVQNILQLFCDLVPHFRMKDEIQVT
EITLLLEELCLSLLRHPCFWKIELTQLSFQLLCLSEVSLRITGECASFIHLIEQSYEQGK
EDFPVEQAIMGIAVLILQAPLSQQKPLLSLAFQLLSYAGSHHSPSSAQLLLIPVLQIVSS
SAPEDSISEQDDGPSRHHLALKLLEMIQQESPKEPNQLLPWKLSFPVTNMYGSLFTTWRI
FELMKDEANVRDWLSSIKSLLPITTQVPVHVYLLLAHLLIQENGPSLQNVLCATTEIAKV
DSSQVPNLVSVLMFKLGKPLEPELYRDILYTLPALGVHKIGVVQILRIIKILGNTPKLGA
IALRLMTSLWEKQDRIYPDLQQSMATSDGPTLLVGKDTQWEKLIAKASSIRDICRHRPYQ
HGADMLAAISKVLNECTKLDQSTPAALVLQGLHALCQAEVVCIRSVWEVLSPELGCEARP
LILKAISELFALVPSLTVNTPEYEKFKAQVVSFLWNHSQSKDPMVASAAYKSLSEFGSEE
NNIYHLPEKARPEMELEEELNEDEEKEEDLSVPGSSYIKLLSLSLPAVFPALEEFFVSLV
KQEMVNMPRGVYHSALRGSMARSDQGKIVAGIPNFMLKMYERNKQPGLKPSLSAGMLLCY
DIPIHVDKDGRPINRFLASRGRSFQQTLVALLHEVGFQSSEWHRSIMLPYSWLGFMNRTF
HAALQGRQADLDLQLKHGKDNSEELQNKKITAWLWVRDMLTDVIKLASKDNPVVKGNSLL
ALSSLIIVVSKYESSLSTEIDRRLEAERDFLPTIQWISIVVETLLTIVDGHYHPRGQVYS
WFYHKSYTGENTASAIVQSCAAIGLALLVPVFIISFKEKIKEIVNMLTARLPGKPGADES
QTVQVHVGLALGMFLARLCEEKVSDISGHQINIILMRSLDMLENCCFDTNLEYNSGCILG
VGLVLSYMSHSSQTESRVHVTATLRKLSSYLSDSEGQSRTIQEVLAYSLSCVCISAFSVG
IIEAAEAEDVMNKIRMLTEKNQQTPGFALALGNIVHGLSVCGHGKAEDLSNKLLPPWIKI
VLTEGSPTMQCLAALNGLVSLVGSEGVLFQMKSDPIQSSQFQGKLKEVIRTIIQLTSLSA
VIGVQSNAVWLLGHLHLSSLSTNQSRASVPADFSYLSENSFIRAAIDFLIDGGKKGPESV
PTSCVKTVMKPIVTVGKSYQYPPVNWASLLSPLLRLNFGEEVQLLCIQLMVTQAQSSQNA
AMLLGMWVIPPLVYSLSVKSRKYLFGSLSLWMKYVSAEQLQVFTKVFIVQHFEAKNRDQN
PELCQESLEGLSQAMKLPNPAQHLWNPLCQTAEKIFDILPNKIQRNEVDLYVMIAKCLAE
MTDAEVNRIFQITKSNVEKTVFVRVYLISQGRFSLMCLNNVIDAVVECDQRETVAWIILH
SFYHARIVSHPNTGVLKRLEWMLELMGIIRSVAYQSKPVQNVTLEEAVDFLFQIFAALVV
AWGDHATPLLLGFSASWLSWHKDRGESSLAACSPNYLGQSPLNRLTLKETLTLLPNSMHL
LLAKEPWKEQTPKFIDWLFSILESPKEALSASTRDILKATLLTLRFLPEFKRKVVWTRVC
GW
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatctcaagaaacgatttgaatttcccaacacccttgtccagtcacaggct
gtgagttatctaattgctgcagtgataaaggaaaatgtgtcaaaaaagatatgtgagtcc
acccttcagactcctgctttgaccttgctttgggagaagtgctgcagtgacaatgtgatt
gtgcgatctacctgctgtgaaggtctggtggcgcttgttgcacaggattatgcggagttc
agctatatactggatggaatactcaatctgattccttcagccagaaatacacatgatttg
gtaaaagctattgtgaaattattgcaaatgcaggcacttaaggtggaaaaatgtggagaa
aagtctacccaggagctatataaaatcagttatcctcctcaccctcttatcaccgtgctt
gaatacagacctgattgttggccagttcttctgcaacagttgactttgtttttccaacac
tgcccagaaagggcagagacttcatgtgtccatgtgatggctccatttctgcagtatcta
tattgtgaaccatcccagctgcacgagtattctcagttgagaatgggtctgcttaagcct
ttatttcggtcccagggtccatgggacaaggaaaaaccatcaactttggtacaaaatatc
cttcagctgttttgtgacttagttccacactttcggatgaaggatgagatacaagtcaca
gaaattacattgttgcttgaggaactgtgtttaagtcttttgcgccatccctgtttttgg
aagattgagcttacccaactgagctttcagcttctctgcctctctgaggtcagcctgagg
ataactggggaatgtgcatcttttattcatcttatagagcaaagttatgaacaagggaaa
gaggattttccagttgaacaagccataatgggaatagctgtacttattctacaggctcca
ttaagtcagcagaagccattgttaagtctagcttttcagctcctctcttatgccggatcc
caccactccccaagctcagcccagctgctgctgataccagtactgcagatcgtctcctcc
tctgcccctgaggacagcatatcagagcaagatgatggcccatctaggcaccatctggct
ttaaagcttttggaaatgatacagcaagagagtcccaaagaaccaaaccaattgttgcct
tggaagctttctttccccgtgacaaatatgtatggatcgttgtttaccacctggcggatc
ttcgaactcatgaaagacgaggccaatgtgcgtgactggttgtcttccattaaatcattg
ctgcctatcactactcaagttcctgtacatgtttatcttcttctggctcacctcctgatt
caagaaaatggacccagtcttcagaacgttctgtgcgccaccacagaaatcgctaaagtt
gattcttctcaggtaccaaatctagtctcagtcttgatgtttaagttgggaaagccactg
gaacctgaactttatcgtgacatcttgtatactttgccagccctgggggtccacaagatc
ggtgtagttcagattttgcgaataattaagatcctgggaaacacccccaaacttggagcc
atcgctctacgtctgatgacatctttgtgggaaaaacaggatcgcatctaccctgatttg
cagcagtccatggcaacatctgatggaccaactctgcttgttggcaaggacactcaatgg
gagaaattgattgccaaagcctcctccataagagatatttgtcggcataggccatatcag
cacggtgcagacatgttggcagcaatttctaaggtgctgaatgagtgtactaagcttgat
cagtctacaccagcagccttggtgttacaaggtcttcatgcactctgtcaagctgaggtg
gtttgtattcgctctgtgtgggaggtactgtccccagagttgggctgtgaagcacgacct
ctcattttaaaggcaatcagcgaactctttgctctggtcccttctttgacagtgaacaca
ccagaatatgagaaatttaaagcccaagttgtcagcttcctttggaatcactctcaaagc
aaggaccccatggtagcctccgctgcatacaaatctctatcagaatttggttcagaagaa
aacaacatctatcatctgcctgaaaaggcaagaccagaaatggaactcgaggaagaactg
aatgaagatgaagaaaaagaggaggacctctcagtccctggttcttcatatatcaaactg
ctgtccctcagtcttcctgctgtctttccagcactggaagagttttttgtgtcacttgtg
aagcaggagatggtgaatatgccccgtggtgtgtatcattctgcactacgaggatccatg
gcacgttcagaccaaggaaagattgtcgcaggaatccccaatttcatgttgaaaatgtac
gagaggaacaagcaaccaggactgaaaccaagcctttcagctggcatgctactgtgttat
gatattcccatccatgtggacaaagatggcaggcccattaaccgttttctagccagtaga
gggcggagtttccagcaaacgttagtagctcttttacatgaggtgggcttccagtcctca
gagtggcatcggtccattatgctgccatactcctggcttggatttatgaatagaacattc
catgcagctctacagggaaggcaggcagatctggacttgcagttaaaacatggaaaagat
aattctgaagagttgcagaacaaaaaaattacagcctggctctgggtcagagacatgctc
actgatgttatcaagttggcttcaaaggacaatccagtggttaaagggaactcactccta
gccttaagcagtcttatcattgttgtatctaagtatgaaagcagtctatccacagaaatt
gaccgcagactagaggctgagcgtgattttcttcccaccatccagtggatttctattgtg
gtggagaccctcctgactattgtagatggtcattaccaccccaggggacaagtgtattct
tggttctatcataaatcctacactggtgaaaacacagcaagtgccattgtccagtcctgt
gctgccatagggctggctctcttggtgccagttttcattatatctttcaaggagaagatt
aaggaaatagtgaacatgctgactgccaggttacctgggaaaccaggtgctgatgagtct
caaactgttcaagtccacgtgggcctggctttggggatgtttctcgctcgtttgtgtgaa
gaaaaagtcagtgatatatccggccaccagataaacattattttgatgagatccctcgac
atgttggaaaactgctgctttgacactaatctggagtacaactccggctgtatcttggga
gtaggacttgtcctatcctatatgagccacagcagccaaacagaatcccgagttcatgtc
actgcaactctccggaagctctcttcatatctgagtgatagtgagggccaaagcagaaca
attcaagaggttctcgcatactccctgagctgtgtctgcatttcagctttcagcgtaggc
atcattgaagcagcagaggctgaagatgtgatgaacaagattcggatgctaacagaaaag
aatcagcagaccccaggatttgccttagcattaggaaatatagtccatggtttgtcagtg
tgtggacatggaaaagcagaagatttgagtaacaaacttcttcctccctggataaagatt
gttcttacagagggatctcccacaatgcagtgcctggctgcactgaatggtctggtttcc
ttggtgggttctgaaggagttctgtttcagatgaaatcagatcctatccaatcctctcag
tttcaaggcaaattaaaagaagtcatcagaaccatcattcagcttaccagtttatctgca
gttattggtgtgcagtcaaatgcagtctggcttctaggacatcttcacctatccagcctg
tccacaaatcagagcagagcatctgttcctgctgactttagctacttgtctgaaaacagt
tttatcagagcggccattgactttctcattgatggaggaaagaaaggtcccgaatctgtc
cccacttcctgtgtgaaaacagtgatgaaacccatagtaactgttggaaaaagctaccaa
tatcctccagtgaactgggcttcacttctctcccctcttttgaggctgaactttggtgaa
gaggtgcagctcctgtgcatccagcttatggtgacccaggcccagtcatcccagaatgcc
gccatgttgttggggatgtgggtcataccacctctggtttacagcctgagtgtgaaatcc
agaaaatacctttttggttctttgtcactgtggatgaaatatgtctcggcggagcagctg
caggttttcaccaaagtgtttattgtccaacattttgaagccaagaaccgtgaccaaaat
cctgagctgtgccaggagagcttagaaggacttagccaggcaatgaagcttcccaaccca
gcacagcacctctggaatcctctgtgccagactgctgagaaaatatttgacattttgcca
aataagattcagagaaatgaagtagacctgtatgtcatgatagcaaaatgccttgctgaa
atgaccgacgctgaggttaatcggattttccagattaccaagagcaacgtagagaagact
gtctttgtccgagtatatttaatctctcaaggtcgattttccttgatgtgtttgaataat
gtaattgatgctgttgttgagtgtgaccagagagaaacagttgcctggataatattgcac
agtttctaccatgcacgaattgtaagccatccaaatacaggagtgttgaagagactggag
tggatgctggaactaatggggattattagaagtgttgcttaccagtcaaaacctgttcag
aatgtgactcttgaagaggctgttgacttcctgttccagatctttgctgctttggtggtt
gcctggggtgaccatgctactccacttctccttggcttcagtgctagttggttatcttgg
cataaggaccgtggggaaagtagcttggcagcatgttctcccaactatcttggccagagt
ccactcaacaggctcaccttgaaagagactctcaccctccttcccaacagtatgcacctt
ttacttgccaaagagccgtggaaagagcaaacaccaaagttcattgattggctattcagt
atcttggaaagccctaaagaagcactctcagcaagtaccagagatattttgaaagccaca
cttctgaccctgagatttctacccgagtttaagaggaaagtagtatggaccagggtatgt
ggttggtag
DBGET
integrated database retrieval system
