Tachyglossus aculeatus (Australian echidna): 119949534
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Entry
119949534 CDS
T10703
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu00100
Steroid biosynthesis
tacu01100
Metabolic pathways
Module
tacu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
119949534 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tacu01006
]
119949534 (FDFT1)
Enzymes [BR:
tacu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
119949534 (FDFT1)
Prenyltransferases [BR:
tacu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
119949534 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
119949534
NCBI-ProteinID:
XP_038627319
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All DBs
Position
X2:1202126..1214837
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AA seq
417 aa
AA seq
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MEFVKCLGHPEEFYNLLKFKMGGCKTVLSKMDQDSLSDSMKTCYRYLNETSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMTISLETKVPMLVNFHSFLDQPDWRYLESKEKDRQ
VLEDFPTISLEFRNLSEKYRAVIAGTCQEMGAGMAEFLEKKVDSQQDWDKYCHYVAGLVG
IGLSRLFSASEMEDPVVGEDTKVANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYA
KQLSDFTNPENVDLAVQCLNELVTNALHHVPDVLTYLSRLRNQSVFNFCAIPQVMAMATL
AACYNNQQVFRGVVKIRKGQAVTLMMGATSLPAVHAIMSRYLEEIQRQIPISDPSSSKTE
QIVSCALTLSLPGGRLTSRAHYSPIYVSCAMVLVALSWQYLSSLTQGPEDCLRTGEN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtcaagtgcctgggtcaccccgaggagttctacaacctgctgaagttcaag
atggggggttgcaagaccgtgctgtccaagatggaccaggactcactcagcgacagcatg
aaaacctgctacaggtacctgaacgagaccagccgcagcttcgccgccgtcatccaggcc
ctggacggggagctgcgccacgccgtgtgcatcttctacctggtcctccgtgcgctggac
accgtggaagacgacatgaccatcagtttggagaccaaggtccccatgcttgtcaatttc
cactccttccttgatcagcccgactggaggtacctggagagcaaggagaaagaccgccaa
gtcctggaggatttccccacgatatccctagagttccggaatctctccgagaagtaccgg
gctgtgatcgcgggcacttgccaagagatgggagccgggatggccgagtttctggagaag
aaggtggactcccagcaggactgggacaagtactgccactatgtcgccgggttggtggga
atcggcctctcgcgcctcttctccgcgtccgagatggaggaccccgtggtgggcgaggac
accaaggtggccaactccatgggcctcttcctgcagaagaccaacatcatccgggactac
ctggaggaccagctagagggcagggagttctggcctcgagaggtttggagccgttacgcc
aaacagctgtcggatttcaccaatcctgagaatgtggacctggccgtacagtgtctgaat
gaacttgtcaccaacgctctgcaccatgtccctgacgtcctcacctacctgtcccgcctg
aggaaccagagcgtcttcaacttctgtgccatcccccaggtcatggccatggccacccta
gccgcttgctacaacaaccagcaggttttccggggggtagtgaagattcgcaaggggcag
gccgtcaccctgatgatgggggccaccagcctgccagccgtccatgccatcatgagccgc
tatctggaagagatccagcggcagatccccatctcggacccatcctccagcaagacagag
cagatcgtctcctgcgccctcacgctcagcctgcccggcggccgcctgaccagccgtgcc
cactactccccgatctacgtctcctgcgccatggtcctggtggccctcagctggcagtac
ctcagcagcctgacccagggcccagaggattgcctgcggactggagagaactga
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