Tachyglossus aculeatus (Australian echidna): 119949552
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Entry
119949552 CDS
T10703
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03082
ATP-dependent chromatin remodeling
tacu04714
Thermogenesis
tacu05225
Hepatocellular carcinoma
Brite
Transcription machinery [BR:
tacu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119949552 (SMARCA4)
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119949552 (SMARCA4)
Chromatin remodeling factors
BAF complex
119949552 (SMARCA4)
PBAF complex
119949552 (SMARCA4)
GBAF(ncBAF) complex
119949552 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119949552
NCBI-ProteinID:
XP_038627341
LinkDB
All DBs
Position
X2:complement(11120488..11206731)
Genome browser
AA seq
1642 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPPQG
PGGYAQDNMHQMHKPMDSMHEKGMADDPRYNQMKGMGMRSGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQMASGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVAGTGPGPGPGPGQGP
GPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPDGPMANAAAPTSTPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVDSGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPTLPVDEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHST
GSGSASFAHTAPPPMCLNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRR
REEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLT
EKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDTGSSTPTTSTRSRDKDDDSKKQKKRG
RPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKP
VDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKI
EKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSRAKPV
VSDDDSEEEQEEDRSGSGSEED
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggatccgcccctgggaggcacacctcgaccagggccttctccaggacct
ggcccatctcctggtgctatgttgggcccaagtcctggcccttcccctggctctgcacat
agcatgatgggacccagccctgggccaccttcagcaggacaccccatacctcctcagggg
cctggaggctacgctcaagacaacatgcatcagatgcataagccaatggattccatgcat
gagaaaggaatggcagatgatcctcgctataaccagatgaaagggatgggaatgagatct
ggaggacattcgggaatgggtcctcctccaagcccgatggatcaacattctcaaggttac
ccttctcccctcggtggctcggagcacgcgtccagtccggttccagccaacggcccatcc
tcaggtccccagatggcatccggccccggcggggttccgttagatggtaccgacccccag
gcgttaggacaacagaaccggggcccaactcctttcaaccagaaccagctgcaccagcta
agagctcaaatcatggcttacaagatgctggctagagggcagccgttacccgaccatctg
cagatggcggtccaggggaaaagaccgatgcctggaatgcagcagcaaatgccaacacta
cctccaccttctgtggctggcaccggcccaggcccaggccctggccctggacaaggccca
ggcccagcacctccaaactatagcagacctcatggtatgggagggcccaacatgccccct
cctggcccctcaggagttcccccaggaatgcctggacagcctcccggtggccccccaaag
ccctggcctgacggacccatggcaaatgctgcagcacccactagcacacctcagaaattg
attccccctcaaccaacgggccgtccttcaccagcaccccctgcagtgcctcctgcagcg
tcccccgtgatgccgccccagacgcagtcccccggacagccagcccagcctgctcccatg
gtccagctccatcagaaacagaatcgaattactcccatccagaaaccaagaggacttgac
cctgtggaaattttacaggagcgagaatacaggctgcaggctcgcattgcccatcgaatc
caagagcttgaaaatcttcctggctccctggctggtgatttgagaaccaaagctaccatt
gaactcaaagcactcagactgcttaactttcaaagacagctgcgtcaggaagtcgtggtg
tgcatgagaagagatacggccctagaaacagccctgaatgccaaggcgtataaacgcagc
aagcgacagtccctacgtgaggctcggatcacagagaaactggagaaacagcaaaagatt
gagcaagaacggaaacgccgacagaagcaccaggaatacctcaacagcattcttcagcat
gccaaggacttcaaagaataccatcgatcggtcaccggcaaaattcaaaaacttacaaaa
gcagtggctacttaccatgccaacacagaacgggagcagaagaaggaaaacgaaagaatc
gaaaaggaaagaatgcggaggctgatggctgaagatgaagaaggataccgtaagctcatc
gatcagaagaaagataagcgtttggcatacctgcttcagcagacagatgagtacgtggct
aacctcaccgaactggtccgacagcacaaggctgctcaggttgcaaaggaaaaaaagaag
aaaaagaaaaagaagaaggcagagaatgcagaagggcagactcctgcaattggaccggat
ggcgagcctctagacgaaaccagccagatgagtgatctaccagttaaagtgattcatgtt
gacagtggaaagatactcacaggtacagatgcccccaaagcggggcagctggaagcctgg
ctggaaatgaatccaggatatgaagtggccccaagatcggacagtgaggagagtggctcg
gaagaagaagaggaggaagaggaggaggaacagccacaacctgctcagcctactcttccg
gtggatgaaaagaagaagatcccggatcccgatagtgatgacgtctctgaagtggatgcg
agacacatcattgaaaacgctaagcaagatgttgatgatgagtatggcgtctcccaggct
cttgcccgtggtctgcagtcatattatgctgtggcccatgccgtcactgaaagggtggac
aaacagtccacacttatggtcaacggtgttctcaaacagtaccagattaaaggtttggag
tggctggtatcgctgtacaacaataacctgaatggaattctagccgacgaaatgggtctg
ggcaaaactatccagactattgctttaattacatacctcatggaacataagcgaatcaat
ggacctttcctcatcatcgtacctctctcaactctatcgaactgggcgtacgaatttgat
aaatgggctccttctgtggtaaaagtatcatacaagggctctccggcagcaagacgtgcc
tttgtacctcaacttcgaagtggaaaatttaatgtcttgctcactacatatgagtacatc
attaaagataaacatattcttgccaagattcgctggaagtacatgattgtagatgaaggt
cacaggatgaagaatcatcattgtaagctaacccaagtcctcaacacacactacgtagct
ccacgccgtttgctgctaacaggcactccactacagaacaagctacctgaactgtgggcc
ctgctcaatttcttgctgcctaccatcttcaagagctgcagtaccttcgagcagtggttt
aacgccccttttgccatgacaggggaaaaggtggacctgaatgaagaagaaactattcta
attatccgccgtttacacaaagttcttcgccccttccttctcaggagattaaagaaagaa
gtagaagctcaattgcctgaaaaggtggaatatgtgatcaagtgcgacatgtctgcgtta
cagcgagtgctctaccgacatatgcaggccaaaggagtgctgctcaccgatggatccgag
aaagataagaagggcaaaggaggcaccaagaccctgatgaacactatcatgcagctgagg
aagatctgtaaccacccttacatgtttcagcacatagaggaatcgttttccgaacaccta
gggtttactggaggcattgtccaagggcttgatttataccgagcctccggcaaattcgaa
ctcttggacagaattcttcccaagctacgtgctaccaaccacaaagtcctcctgttctgt
cagatgacctccctcatgactatcatggaagattattttgcatatcgtggcttcaaatac
ctcaggctcgatggaaccactaaagctgaagatcgtggcatgttgctaaaaaccttcaat
gagccaggctctgaatatttcatttttctgctgagcactcgggctggggggctggggctg
aaccttcagtccgctgatactgtgatcatttttgacagtgactggaatcctcaccaggac
ttgcaagcccaggaccgagcccatcgtattgggcagcagaacgaggtacgtgtcctccgt
ctctgcacggtcaatagtgtggaagagaagatcctagcagcagccaagtacaagctgaac
gttgatcagaaagtgatccaggctggtatgtttgaccagaagtcctccagccacgaaaga
agagctttcctgcaagcgattctagagcacgaggagcaggatgagagcagacacagcacg
ggcagcggcagtgcaagcttcgcccacactgcccctccgccaatgtgcctcaaccccgac
ttggaggaaccacctctaaaggaagaagacgaggttcccgatgatgaaacggttaaccag
atgattgcgcgacacgaagaggagtttgaccttttcatgcgcatggatctggaccgcaga
cgggaggaagcccgcaatcccaaaagaaagccacgcctgatggaggaagatgagcttcct
tcttggattattaaggatgatgctgaagtggagaggctgacctgtgaagaggaggaagaa
aaaatgtttggccgcggttcccgccatcgtaaagaagtggactacagcgactccctgact
gagaagcagtggctcaaggcaatagaagaaggcacactggaggaaatagaggaggaggtt
cgtcaaaagaaatcatcccgtaagcgcaaacgcgacagcgacactggttcatctactcca
actaccagcacccgcagccgggataaagatgacgatagcaaaaagcaaaagaaacgaggc
aggcctcctgctgaaaaactttctcctaacccaccaaacctcaccaaaaagatgaagaag
atagtcgatgctgtgatcaaatataaagacagtagtagtggacgccaactaagcgaggta
ttcatccagcttccttctcgcaaagaactgccagagtactacgagctcatccgcaagcca
gtggactttaagaaaataaaggaacggatccgcaaccacaagtaccgtagcctgaatgac
ctggagaaggatgtgatgctcctctgtcagaatgcgcaaacatttaatttggagggctcc
ttgatctacgaagactcaattgtcctgcagtctgttttcaccagtgtgagacagaaaatt
gaaaaggaagacgacagtgagggggaagaaagtgaagaggaggaagaaggagaagaagaa
ggatctgaatctgagtctcgctctgtcaaagtgaagatcaaattaggcaggaaggagaaa
gcacaagaccggctgaaggggcgaagacgcactagccggggatctcgggccaaaccagta
gtgagtgatgatgacagcgaagaagagcaagaggaggatcgctcaggaagtggcagtgag
gaagattaa
DBGET
integrated database retrieval system
