Trichoplax adhaerens (placozoan): TRIADDRAFT_1612
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Entry
TRIADDRAFT_1612 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
tad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIADDRAFT_1612
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_1612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_1612
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_1612
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
TRIADDRAFT_1612
Spliceosome [BR:
tad03041
]
Complex C
Other components
EJC/TREX
TRIADDRAFT_1612
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TRIADDRAFT_1612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
CCDC183_C
PFD1115c_C
Motif
Other DBs
NCBI-GeneID:
6758693
NCBI-ProteinID:
XP_002117425
JGI:
1612
UniProt:
B3SB40
LinkDB
All DBs
AA seq
517 aa
AA seq
DB search
SESKSAIDQAFRDLLKELIVQKQKGTDDNQVKIDDLTWLIKISTICAKSGLASVSLPFIL
LVDIFDCLTLRVCQRMFGYVEKEMQTWKDTAFDAMGKVYILRMCNDLLRRLSRSQDTIFC
GQIRLFLSRYFPLDERSGLNVMSHFNVDNVTSYTKRDMVDSQTASAEGVMDVEDGEISEG
DDDEKKAEKNKTPIDYNLYYRFWSLQDFFSNPNLCYSNSGWNALTTSSRVVLDVFKSYKL
EALTSNKSTKTDNDNPSDQDGMEISDSCDNAMDVSNRYFAKFLTNEKLLDLQLNDSQFRR
TILIQFLILFQYLTSTVKFRPTSCTISERQQQWIERSTKLVYQLLEETPPGGKQFVKLVR
EILSREEYWSKWKNDGCPSFVRPGVSTESSDSSSAPRKKRKISRHYSPTSHKIELGNPEL
TRLWNLSTDNLSACKMSGEKFTPTIKDFFEEAIEQCDPEAQVEEEYKLVNNLVFRWRSFR
ILAVQSSIIFPTSSSTPSSTTSKADFLAGALAEMAKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
agtgaaagtaaaagtgccattgatcaagcattccgagatctactgaaagaattgatcgtg
caaaagcaaaagggcaccgatgacaaccaggtcaaaattgacgatctcacttggctaatt
aagatatcgacgatatgtgccaaatcaggtttagcatcagtttccttgccatttattctt
ttagtagatatcttcgattgtttgacccttcgtgtatgtcaacgcatgtttggctatgtg
gagaaagaaatgcaaacctggaaagataccgctttcgacgccatgggtaaagtatatatc
ttacgcatgtgtaatgatctccttcgacggttatcgcgttcccaagataccatcttttgt
ggccaaattcgattatttctcagtcgttattttccgctcgatgaacgctcgggcttaaat
gtcatgagtcatttcaatgtggataatgtgacgagttatacaaagcgtgacatggttgac
tctcagacagcctccgccgaaggggtgatggatgttgaagacggagaaataagtgaaggg
gatgatgacgaaaaaaaagccgaaaaaaataaaacacccattgattacaatctctactat
cgtttttggtcattgcaagactttttcagtaatcctaatttatgctattccaattcgggt
tggaatgcactcacgactagtagtcgtgtcgttttggatgttttcaaaagctacaagcta
gaagctcttacaagtaataaaagtacaaaaacagacaacgataatccgtccgatcaggat
gggatggaaatatcggactcatgtgacaatgctatggatgtctccaatcgctattttgct
aaatttttaaccaatgaaaagctattagatttgcagctcaatgatagccaatttagaaga
acaatacttatacaatttctaatcttgtttcaatatttgaccagtacggtcaaatttaga
ccaactagctgcactatttcagaaaggcagcaacagtggattgaaagatcaaccaaattg
gtataccaacttttagaagagacgcctcctggagggaaacaatttgtaaagttagttcgt
gagatattatcgcgcgaagaatattggagtaaatggaaaaatgatggctgtcctagtttt
gtacggccaggcgtttcaactgaaagtagcgatagctcttccgcacctcgtaagaaacgt
aaaattagtaggcattattctcctacttctcacaagatcgagcttggaaatccggagcta
acacgattatggaatttatcaactgataatttatctgcatgtaaaatgagtggtgaaaaa
tttacgcctactatcaaagattttttcgaagaagcgatagaacagtgcgatccagaagct
caagtagaggaagaatataaattagtcaataacctagtttttcgctggcgttcatttcgt
atcttggctgtacaaagttctatcatatttcccacaagttcttctactccgtcttcaacc
acaagtaaagcagacttcctagctggtgctctagcagaaatggctaaggaa
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