Trichoplax adhaerens (placozoan): TRIADDRAFT_18324
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Entry
TRIADDRAFT_18324 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03420
Nucleotide excision repair
tad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRIADDRAFT_18324
09124 Replication and repair
03420 Nucleotide excision repair
TRIADDRAFT_18324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tad04121
]
TRIADDRAFT_18324
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_18324
Ubiquitin system [BR:
tad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
TRIADDRAFT_18324
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
TRIADDRAFT_18324
TCR (transcription coupled repair) factors
Cul4-CSA complex
TRIADDRAFT_18324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
6749937
NCBI-ProteinID:
XP_002107945
JGI:
18324
UniProt:
B3RLC6
LinkDB
All DBs
AA seq
1134 aa
AA seq
DB search
MACNYVVTAHKPTAANASLFGNFTGPHDLNLIVAKNNRLDIQLVTAEGLVPLLDVGVYGR
IASMQLIRPENENCDLLFILTCRYRVCILQYKPETKSIITRAYGDMKNRVSRPSETGLIG
IVDPDCKVICLKLYDGWLKLIPLELDTDKEMSAEDVRLEELQVLDVKFLYGFTEPTIALI
YESGQNRYLKTYEISLQNADIHRQPWNIGKVEEEAFMILPVPPPSCGMVVIGAGSISYYK
GQDSLHITPASLKDRITCFGRVDSNGCRYLLGDYSGRLFMLILVQEHSQSGIKVKDLCLE
YLGETSIPSCITYLDNAFAYIGSSCGDSQLIKVLNTSPDSETDSYIDVIDNFTNLGPIID
MVSVDLDKQGQSQLVTCSGFGKNASLRVLRNGIGIHELANIDLDHICGIWRLRTVSRSIS
EYDDVLVLSFAGHSRFLKFDGREVEETDISGFDDYKETDFAANVAFDQIVQISNESVRLA
GCDGRGLLQEWKPPNGKTISKSTAGNTQIMVASGCELFYLEIGEGELKQVSNISLEHDIA
CIDISLKDDNERAQICAVGLWVDMSARLLLLPNLQLMLTESLGGDIIPRSIMLNRFDNEI
YLLVAMGDGTLAYYLVNTTTCSLTNRKSVNLGVVHSNLYTFKSGSISNVFACSDRPTVIY
INNHKLVFSNVNLKKVNFMSPFHSESFPNSLALVNDSGFIIGTIDEIQKLHIRTKPLGET
TRQEESQSFGIITCRTEVPSEDDKNFVPTHQSASLLVSNRTMCPEQSDNSSSTFDSDTLS
EKNIDSVLIIDQHSLDAQCALQLQDCEWGMSLISCTFENDPEAYYCVGTAFVNLEDKEPT
KGNIRILKYFEGKIQQVHSKEVSGAVYCMVAFNGRLLASVNSTVSVYEWTSNKELVEETS
FHNNVLALYLKTKGDFILIGDLMRSISLCAYRPMNNEIELICKNNDPNWMTAVEIIDDDS
YLGGENSHNLFTCQKNSSSSEEEQKHLPTVGVYHVGEFVNVFRQGSLVMQNTVDIPDSVQ
GSILFGTVSGAVGVVVTLAPAMFEFVSAIANKLSTVVKGVGKIEHQFWRSFSNDRKTEPC
QSFVDGDLVESFLDLSPEDMQRVANGLTIQTADGTRPAMVEDVLKTVEELSRIH
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtaattacgttgtcacagctcataaacctacagcggccaacgcttcattattc
ggcaatttcactggcccccatgatctcaatttaattgtggctaaaaacaatcgtttggat
attcaactggttaccgctgaagggcttgtaccacttctagatgtcggagtctacggtaga
attgctagcatgcagctaataagacctgagaatgaaaattgtgatttactattcatttta
acgtgccgatatcgcgtctgtattttgcaatataaaccagaaactaaatcaattattacg
cgggcttacggtgatatgaagaatcgtgtcagcaggccctcggaaacgggattgatcggt
atagtcgatccagattgtaaagtgatttgtttaaaattatacgatgggtggttaaaatta
atcccgttagaattagataccgataaagaaatgagtgctgaggatgtcagattggaagaa
ttacaagttcttgatgtcaaatttctttatggctttacagaaccaacgatagcgttaata
tatgaaagtggtcagaaccggtatttgaagacctacgaaatatctctgcaaaatgccgat
atacatcgccaaccctggaacatcgggaaagttgaggaagaagcatttatgatcttacct
gttccgcctccttcgtgtggaatggtcgttatcggtgcaggatctatttcatactataaa
ggtcaagatagcttacatataactccagctagccttaaggatcgaatcacatgctttggc
cgtgtagattcgaatggctgtcgctatcttttgggagattatagtggtagactgtttatg
cttatattagttcaagaacattcgcaatctggaataaaagtcaaagatctttgcttagaa
tacctaggagaaacgtctattccaagttgtataacgtacctcgataatgcatttgcctat
attggctcctcttgtggcgattcccagcttattaaggtactgaatacttcaccggattca
gaaactgactcttatattgatgtgatcgataattttaccaacttgggtcccattattgat
atggtttctgtggacttagataaacaaggacaaagccaacttgtcacttgctctggtttt
ggtaagaatgcctcattacgggtcttaagaaacggcattggcattcatgaattggcgaac
atagatctagaccatatttgtggtatttggcgtttacgaacagtttctcgcagtataagt
gaatatgatgatgttttggtgctttcttttgctggtcattctcgctttttaaaatttgac
ggccgagaagttgaagaaactgatatttctggtttcgatgattataaagaaactgatttt
gcggctaatgttgctttcgatcaaatagttcagatatcaaacgaatctgtccgtcttgct
ggttgtgatggaagaggcctactacaggagtggaaaccaccgaatggaaaaactattagc
aagtcaactgctggcaatacgcaaataatggtagccagtggttgtgaattattctatcta
gaaattggtgagggcgaactgaagcaagtcagcaatatttcattagagcatgatatcgcc
tgcattgatatcagtttgaaagatgataacgagcgggctcaaatttgcgctgtcggcctc
tgggttgacatgtctgctcgactgttattactacccaatttgcagttgatgctcacggag
tcccttggtggtgatattattccacgatccatcatgctaaatagatttgataacgaaatt
tatctgttggtagccatgggtgatggtactcttgcttactatctggtcaatactactacc
tgttccctaaccaacagaaaatccgtcaaccttggcgtagtacacagtaacctgtacacg
tttaagtctggttccatttcaaacgtttttgcctgtagtgatcgtcctaccgttatttat
ataaataatcataaattagtattttcgaatgttaaccttaagaaggtaaattttatgtca
ccgttccactcagagtcgtttccgaatagcttggccttagtaaatgattcaggttttata
attggaactattgatgaaattcaaaaactacatatcagaacaaagcctttaggggaaact
acgaggcaagaagaatcccaaagtttcggcattattacctgtagaactgaggtgccttct
gaagacgacaaaaacttcgtgccaactcatcaaagcgcatcactactagtatcaaaccgt
actatgtgcccagaacaaagtgataactcctcgtcaacttttgacagtgacactctttca
gagaaaaatattgactcggttctcattatagatcagcactctttagatgctcaatgtgca
ctccagttacaagactgtgaatggggcatgagtttgatatcatgcacgtttgagaacgat
ccagaggcttattattgtgttggtaccgcttttgtaaatctagaagataaggaacccacc
aaaggcaatattcgaatattgaaatacttcgaaggtaaaattcaacaagtacacagtaaa
gaagtttcgggagcagtatactgcatggttgctttcaacggcaggcttctagcctcagtc
aacagcacggtttctgtttatgaatggacatctaataaggagttagtagaagaaacatcg
ttccataataacgtcctggctctatatttgaaaactaaaggagattttattctcattggg
gatctaatgcggtcaatttcgttatgcgcttatcgacctatgaataatgagatcgaattg
atttgcaagaacaatgaccctaattggatgaccgctgtggaaataatcgatgatgattct
tatttaggtggcgaaaattctcataacttatttacctgccagaagaatagttcgtcgtca
gaagaagaacagaaacatttaccgacggtcggtgtttatcatgtgggagaatttgtaaac
gtttttagacaagggtctttggtaatgcaaaataccgttgatattcctgatagcgtacaa
ggctctatcttgtttggtactgtatctggtgcagttggtgttgtggtcacattggcacca
gctatgttcgaatttgtttcggcaattgcaaacaaactatccactgttgtcaaaggcgtt
gggaagattgaacaccaattctggcgctcattttctaatgatcgtaagactgagccgtgc
caaagttttgttgatggcgatcttgttgagagcttcttagacctttcgccggaagatatg
caaagagttgcaaacggattaactatacaaactgcggatggcactcgcccggctatggta
gaggatgttttgaaaaccgtcgaagaacttagtcgtatacattaa
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