Trichoplax adhaerens (placozoan): TRIADDRAFT_19042
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Entry
TRIADDRAFT_19042 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
tad
Trichoplax adhaerens (placozoan)
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_19042
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRIADDRAFT_19042
Spliceosome [BR:
tad03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
TRIADDRAFT_19042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-GeneID:
6750159
NCBI-ProteinID:
XP_002108210
JGI:
19042
UniProt:
B3RIM1
LinkDB
All DBs
AA seq
393 aa
AA seq
DB search
MPRANIKKNFFYKGRERTVDVNTYESGDFASLLLSQNVLRGLRDAGYIKPSPIQLKSIPV
ARCGLDLIAQAKSGTGKTCVFVVVALEIVDLTICSPQVLILAPTREIAIQINQVVNTIGK
FVGGLSSQVFIGGLPVKLDNQKTKNCHLAVGTPGRVLQLIESGALATKSIRLFVLDEADK
LLEKNFTEQLNQIFKHLPTSKQILALSATYPECLTKLLIKCMKNPQVIRLDSKRPVLHGV
KQYFCKISSYALSHKIFSLKIDKLSYILTKIPFHQCLVFSNYQTVSVLRAILQKDRMDAI
KKMNDFSCRVLISSDLTARGVDIENIDLVVNLDLPNDPETYLHRVGRAGRFGNTVDCFTP
FQLDIQLKYCITKPGVNLIYARKFRNCHHPYNR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccaagggctaatataaagaaaaattttttttacaaaggaagagaaaggactgttgat
gtcaacacatatgagtccggagattttgcaagcttactgctatcacaaaatgttttacga
ggcttacgagatgctggatatattaaaccatctccgatacaattaaaatcaattccagtc
gcacgttgtggattagatctaatcgcacaagcgaaatctggaactggcaagacgtgcgta
tttgtcgtcgttgctttagaaatcgttgatctaactatttgttcccctcaggttttaatt
ctagcaccgacgcgagaaattgcaatacaaattaaccaagttgtgaatactattggtaaa
tttgttggagggttatcatcacaagtctttatcggaggcttaccggttaaattggataat
caaaaaactaaaaactgccacttagcggtcggaacgcccggtcgtgtccttcaactgatt
gaatcgggtgctttagcaactaaatctattagattattcgtactagatgaagctgataag
ctactcgaaaagaatttcacggaacagcttaaccaaatctttaagcatttgccgacatca
aagcaaatattggcgctatcagcaacatatcctgaatgtttgacaaaattattaattaaa
tgcatgaagaacccacaagttataaggctggatagcaaaagaccagttcttcatggcgta
aagcaatatttttgtaagatttcgtcgtacgcactttctcataaaatattctcacttaag
atcgacaaattaagttatatcttaactaaaatcccttttcatcagtgcctcgtattttca
aactaccaaacagtgtcggtattacgagcaatactccagaaggatcgaatggatgctata
aaaaaaatgaacgatttttcttgtcgtgtattgatttcatccgacctgaccgcacgagga
gtagatatcgagaatatagacctagttgtaaatttggatttaccaaatgatcccgaaact
tatctgcatcgagttggaagagcaggtcgatttggtaatacagtagattgttttacccca
ttccagttagatatccaattgaaatactgtataacaaagccgggcgttaatctaatttac
gctaggaagttccggaattgccatcacccttacaaccgctga
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