Trichoplax adhaerens (placozoan): TRIADDRAFT_19938
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Entry
TRIADDRAFT_19938 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad00240
Pyrimidine metabolism
tad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TRIADDRAFT_19938
Enzymes [BR:
tad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
TRIADDRAFT_19938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
RcpC
Motif
Other DBs
NCBI-GeneID:
6749393
NCBI-ProteinID:
XP_002108912
JGI:
19938
UniProt:
B3RI88
LinkDB
All DBs
AA seq
347 aa
AA seq
DB search
TLIDINPEINRALQGNYPVVALESTIITHGMPYPTNLQVAKEVEKIIRDNKVQPATIGVI
DGRIKIGLTEGEIEHLAKSSNTIKIARRDLSIATAKQLSGGTTVSATMLLAHYAGIKVFV
TGGIGGVHRGGELSMDISADLLELGKIPVMVVCAGVKSILDIGLTLEYLETNGVTVMTLG
NDSNFPGFFTAESGYKSPHTVSSPKEAALVFDASKRLGISSGMIVAVPIPKNASASGELV
NSTIHTVLANSKSEGITGKSVTPYILQNVNLLTKGESLKANIELIKNNAKVGSHIASEYT
SLQSEKSQVNKSKININKYIIYIYYSIMYIYKSISCAFGWIISSQIS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
acgttaatagatattaacccagaaataaatcgagccctgcagggcaattatccggtcgta
gctttagaatcaactataatcacacatggaatgccttatcctacgaatttgcaagtagcg
aaagaagtcgagaaaattattcgagataataaagtccaaccagctacaattggagttatt
gatggtagaattaaaatagggctgactgaaggtgaaattgaacatttagctaaatcgtct
aacactatcaaaattgctcgccgtgatctttccattgcaacagctaagcaactatctggt
ggaaccacagtttcagctacaatgttattagctcattatgctggtattaaagtcttcgtt
actggcggaattggtggtgttcaccgtggaggagaattgagtatggatattagtgcagat
cttctagaattaggaaaaatccctgtgatggttgtttgtgctggggttaaatctattctt
gatattggactcactcttgaatatctagagacgaacggggttacagtaatgacgttgggc
aatgactctaattttcctggattttttactgcagaaagcggttataaatctcctcataca
gtttcgtcgcctaaggaagcagcactggtttttgatgccagtaaaagattaggtataagt
agtggtatgatcgtagctgtacctattccgaagaatgcatccgcatcgggcgagttggtt
aatagtactatacatactgttttagcaaattctaaatcagaaggcattaccggtaaatct
gtaactccctacatccttcagaacgtaaacctgttgacaaaaggggaatcattgaaggcc
aatattgaattgataaagaataacgcgaaagtaggaagtcacattgctagtgaatatact
tctctccaatcggaaaaatcgcaggtaaacaaatctaaaattaatataaataaatatata
atatatatatactacagtataatgtatatatacaaatctatatcctgtgcttttgggtgg
attatttcgagtcaaattagttag
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