Trichoplax adhaerens (placozoan): TRIADDRAFT_21397
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Entry
TRIADDRAFT_21397 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRIADDRAFT_21397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tad04121
]
TRIADDRAFT_21397
Enzymes [BR:
tad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TRIADDRAFT_21397
Ubiquitin system [BR:
tad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
TRIADDRAFT_21397
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TRIADDRAFT_21397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
zf-C3HC4_2
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR19_1st
zf-C3HC4
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
zf-RING_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_UBOX
ANAPC4_WD40
Beta-prop_IFT122_1st
zf-RING_5
Beta-prop_DCAF12
zf-C3HC4_4
Beta-prop_WDR75_1st
RING_XB3-XBAT31
zf-rbx1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
WD40_like
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
zf-RING_10
Sina_RING
TRAF3_RING
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
6751106
NCBI-ProteinID:
XP_002109891
JGI:
21397
UniProt:
B3RNR1
LinkDB
All DBs
AA seq
659 aa
AA seq
DB search
MATSLGARNSNGNNGNGNSRRLNRKRPLTPIDDGISDTYNDRNNDYICPICFGVIEEAYM
TKCGHSFCYECIRRSLDENSKCPKCNFQITDKVDPIFPNITLNELIIKHKRRLDVANKCE
SSVSKAANIIRGNRLDVADILSSKSNDDMVLSDINYLLESLSEKKQQLELNSKSNRLQLL
KEFLLQSRKNKEEQLNDLKTKLDLLSNDLKVVEENLVQFPTASTSPAFNGNVGVAATSNN
LNSTVNAGANGFNGSKYVNPKYLVSHSISERRKRLSIHYEDLEDCYFSIKQSAGSKDDSL
ELFMEHLSKFTKFDRFRALATLNYGDLYNHSSIVSSIEFDRDCDYFAIAGVTKKIKIFEY
SSIIRDAVDIHYPVTEMTCSSKISCISWSAYHKEVLASSDYEGTVALWDAFNGVKTRCYQ
EHEKRCWCVDFNKVDPKLFASGSDDAKVKLWSTNLEHSIASLEAKANVCCVKFSPVSRYH
LAFGSADHCVHYYDLRNTSKSLADFKGHRKAVSYTNFVNENEIVSASTDSQLKLWDLNVP
YCTRTFRGHSNEKNFVGLATDGDYIACGSENNSLYLYYKGLSKQLLSFKFDVVRSIFDKD
SRDDDSNEFVSAVCWKRVTNVLVAANSQGTIKVIPDFYPVLMFHNHYNAYDNMNLIVSP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcactgggtgcaagaaatagcaatggtaacaacggtaatgggaatagtcgc
cggttaaatcgtaaacgtcctttaactccaattgatgatggaatttcggatacgtataac
gatcggaataacgactatatctgtcctatatgttttggtgtcatcgaagaagcttacatg
acaaaatgtggccatagcttttgctacgagtgtattcgaagaagtttagatgaaaatagt
aaatgtccgaaatgcaactttcaaatcactgataaagtggatcctatttttccaaatata
acattaaatgaattgattattaaacataagagaaggttagatgttgccaacaagtgtgaa
tcgtcagtaagtaaagccgccaatattattcgtggtaatcgcttagatgttgcggacatc
ctctcaagtaaatccaacgatgatatggttttatctgatattaattacctactggaatca
ttatcggaaaagaaacaacaactggaattgaacagtaaaagcaatcgcctacaattgctg
aaggagtttctattacaatcgaggaaaaataaggaagagcaactaaatgatttaaaaaca
aagctggatttactatcgaatgatttaaaagtagtggaggagaatcttgtccaatttccg
accgcttcaacctctcctgctttcaatggtaacgttggagttgcagcgactagcaataat
ttaaattcaactgtaaatgcaggtgctaatggatttaatggcagcaaatatgttaatccc
aaatatttagtaagtcatagtatcagtgaaagaagaaaacgtttaagtattcattatgaa
gatttggaagattgttatttttccattaagcaatcagctggctctaaagatgatagtttg
gaattattcatggaacatttatccaaatttacaaagtttgatcgttttagagcattagct
acgttaaattatggcgatctatataatcattcaagcatagtatctagcattgaatttgat
agggattgtgattattttgctatagccggtgtaacgaaaaaaattaagatttttgaatat
agtagcattatcagagacgctgttgatattcactatcctgtcacagaaatgacgtgtagc
tcgaaaattagttgcattagttggagtgcatatcacaaggaagttctagccagcagcgat
tacgaaggtactgttgctttatgggatgcgtttaacggagttaaaactagatgctatcag
gagcatgaaaaaagatgttggtgtgttgattttaataaagttgatcctaagttgtttgct
tctggttctgatgacgctaaagtgaagttgtggtcgaccaatttagagcattcaatagca
tctcttgaagccaaggcgaatgtttgttgtgtcaagttcagtcctgttagccgttaccat
ttggcatttggttcagccgatcactgcgtccattattacgatctgcgaaatactagtaaa
tctcttgcggattttaaaggccatcgcaaggctgtgtcttataccaactttgttaacgaa
aatgaaattgtatcagcttctaccgatagccagctaaagctttgggatttgaatgtacca
tactgcactagaacatttaggggtcatagtaacgaaaagaattttgttggcctggccaca
gatggagactatatagcttgcggcagtgagaacaattccttgtacctatattataagggg
ctttcaaagcagttattatctttcaaatttgatgttgtacgcagtatttttgataaagat
tcgagagacgatgacagtaatgaatttgtcagtgctgtttgttggaaaagggttactaat
gtgctggtagcagcaaatagtcaaggaaccataaaggtaattccggatttctatcctgta
ttgatgtttcataatcattacaacgcctacgataatatgaatctcattgttagcccataa
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