Trichoplax adhaerens (placozoan): TRIADDRAFT_21689
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Entry
TRIADDRAFT_21689 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRIADDRAFT_21689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_21689
03041 Spliceosome [BR:
tad03041
]
TRIADDRAFT_21689
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRIADDRAFT_21689
Spliceosome [BR:
tad03041
]
Complex B
Other components
Prp19-related factors
TRIADDRAFT_21689
Complex C
TRIADDRAFT_21689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_15
TPR_12
TPR_8
Mad3_BUB1_I
ARM_TT21_C
ARM_TT21
TPR_7
TPR_1
PPR
AbiH
RPN7
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
6751179
NCBI-ProteinID:
XP_002109964
JGI:
21689
UniProt:
B3RP50
LinkDB
All DBs
AA seq
833 aa
AA seq
DB search
VLQEESDIAFEEEILRNPYSVKFWMRYIEHKANSPKQVINLIHERALKELPGSYKLWYNY
LKLRRKQIRGKCINDPAYQDVNNTYERALVFMHKMPRLWIDYSQFLVDQKFVSRARRTFD
RALQALPITQHHRIWPLYLKFVRSSGIPETSVRVYRRYIKLCPENSEEFIEYLLSIDRID
EAAGKLAELVNSESFVSKEGKSKHQMWQELCTLISKNPDQIKSIKVDAIIRGGLKRFSDM
VGQLWNSLADFYIRSGHFEKARDVYEEAIQTVNTVRDFGQVFDAYAQFEEGMLNAKMEAT
AELGPSTDDDIDIELRLMRYEELIDRRPILLNSVLLRQNPHNVHEWHKRVQLFEGSPQDV
IKTFTAAVQTVSPTEASGKPHTLWVAFARFYEDNDQLPEARIIFQKATKVPFKYVDDLAA
VWCEFAEMELRHKNYDKALDVLRKATAVPSRRAEYFDEKEAVQSRVYKSLKLWMFYADLE
ESLGTFDSTKAVYNRIIDLRIANPQTIINFAMFLEENHYFEEAFKAYERGIALFNWPHVY
DIWLTYLKKFIARYGGKKLERSRDLFENALDNCPSKFAKTLYLLYAKLEEEYGLARHAMA
VYERAASAVLPNEKFEMFNIYISRAADVFGLPYTRQIYERAIESLPDDSTREMCMRFADL
ESKLGEIDRARAIYGYCSQLCDPRKEASFWKTWHDFEVRHGNEDTFREMLRIKRSIQAKF
NTKINYMTAQMLPGSESSGADPGSDDMKKLEERAKAIIEEAKQDQPKVGKRDILFIRGDT
TQEESKEAVMASNPEEIDIDDDDDDNDNDVEKVPAPGMTLIRTSMFCVPYTHA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
gttttgcaggaagaatcggatattgctttcgaagaggaaattttacgcaatccttattcg
gtgaaattttggatgcgttatattgaacataaagccaactcacctaaacaagtcatcaat
ttaatacacgaacgggcattaaaagaactccctggcagctataaattgtggtataattat
ctaaaattaagaaggaaacaaattcgaggaaaatgcatcaatgatcctgcatatcaagat
gttaacaatacttatgaacgagctctcgtattcatgcacaagatgcctcgtctatggatc
gattactcccaattcttagtagatcaaaaatttgtatccagagcacgtcgcacctttgat
cgagctttgcaagctttaccaataacccaacatcatcggatatggccattgtacctaaaa
ttcgttcgatccagtggtatcccagaaacttctgttcgagtgtatcgacgctatatcaaa
ctgtgtccggaaaattcggaagaatttatagaatatttactatcgattgatagaattgat
gaagctgctggtaaacttgctgaattagtaaatagtgagagttttgtatcaaaagaaggc
aaatccaagcatcagatgtggcaagaattatgcacactaatttctaaaaatccagatcag
ataaaatccattaaagtagatgctattattcgcggtggattgaaaagattttccgatatg
gtcggtcaattatggaattccctggccgatttctacattagaagtggacattttgaaaaa
gctcgagatgtttatgaagaagcgatccaaactgttaatacagttagggactttggacag
gtatttgatgcatacgcacaatttgaggaaggtatgctcaatgcaaaaatggaagccacg
gctgaattaggaccctctactgacgacgatattgatatcgaattaagactgatgagatat
gaagagcttatcgacaggagacctatacttctcaacagcgttttattacggcaaaatcct
cataatgttcatgaatggcacaagagagttcagttgttcgaaggaagccctcaagatgta
ataaagacatttacagctgctgtgcaaacggttagtcctactgaggcatctggtaagcca
catactttatgggtagcttttgctcggttttacgaagataatgatcaattacctgaggca
cgtattatttttcaaaaagcaacaaaagttcccttcaaatatgttgatgacttagctgcc
gtgtggtgcgaatttgctgaaatggaattaaggcataaaaattatgataaagcactcgat
gtattacgtaaggcaactgccgtaccttcacggcgtgcagagtacttcgatgagaaagaa
gctgtacaaagtcgtgtttataaatcgttaaagttatggatgttttatgcagacttggaa
gaaagcctcggaacgtttgattctacgaaagctgtttacaacaggatcattgatctaagg
atagccaatcctcaaactattataaactttgcaatgttcttggaagaaaatcattatttt
gaagaagctttcaaggcttatgaacggggtattgcgttatttaactggcctcacgtatat
gacatttggttgacgtacttaaaaaagtttatagctcgctatggcggcaaaaaattagaa
cgatcaagagatttatttgagaacgctcttgataattgtccatcgaaatttgctaaaacg
ttatacttgctatacgcaaagttagaggaagaatatgggctagcccgccatgctatggct
gtttatgaacgagctgcaagtgctgttttaccaaatgaaaaatttgagatgtttaatatc
tacattagccgcgcagctgatgtatttggattgccatatacgcgccagatatatgaacgt
gcaattgaatctctgccggatgatagtactagagaaatgtgtatgcgttttgcggatcta
gagtcgaagttaggcgaaatcgatcgggctagagcaatttatggctattgttcgcagctt
tgtgatccgaggaaagaggcatcattctggaaaacttggcatgactttgaagtacgtcat
ggcaatgaagataccttccgtgaaatgctacgcattaaacgtagcatacaggctaaattt
aacactaagataaactacatgacagcccaaatgcttccgggatcagagtctagtggagct
gatccaggtagtgacgatatgaaaaaacttgaagaacgtgcgaaagcaatcattgaagaa
gctaaacaagatcaacctaaagttggtaaacgggatattttatttatcaggggcgataca
actcaggaagaatcaaaagaggcagttatggcatctaacccggaagaaattgatatagac
gatgacgatgatgataatgataatgatgtagaaaaagtgcctgcacccggtatgaccttg
ataaggacatctatgttctgtgtaccatatacgcatgcctaa
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integrated database retrieval system
