KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_21736
Entry
TRIADDRAFT_21736  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIADDRAFT_21736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tad03041]
    TRIADDRAFT_21736
Spliceosome [BR:tad03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    TRIADDRAFT_21736
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd PRP4 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EML Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 6750468
NCBI-ProteinID: XP_002109821
JGI: 21736
UniProt: B3RNA4
LinkDB
AA seq 484 aa
MLFQFYEAFYNVKTNFHNLITNACLGKTFQFKHGKDDRQTELLAEFERRKKVRSVVVPTD
DSEVKARLRELGEPICLFGEGPSERRNRLREIYAQQDTVVDRVIQEPANESQSSQVIQDV
WYHEGPDSLAPARHHIALYSLKRQMRYAARIERAKPDPDKAAKAQELYKRLGRTTIFCSQ
IGDCRPISFCQFSPDCQYVATGSWSGLCKLWSVPHCEQICFCFIHPYFYLPTKIGHNSRI
GAIVFHPQATLTLSSKSACMASCDAEGSVKLWSLESDTPIRNVSTHTTRVSRICYHPSGR
YLGSACYDHSWRLYDLEADKEVLHQEGHMKEVYCLAFQIDGSLCFSGGLDAYGRVWDLRS
GRCIILLEGHLKGVLSIDSASDGYQVATASADNSVRIWDLRNRKTIYTIPAHSGLVSFVK
YENNRNYLMSASYDKTAKIWSNPGWSPLQTLTGHDDKLMCLDISSDGKYYVTSCYDRTFK
LWSA
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgctatttcaattttatgaagctttttataacgttaagacaaactttcataatttaata
actaatgcctgcttaggcaagacttttcaatttaaacacggaaaggatgaccgccaaact
gaacttttggctgagttcgagcgtcgtaaaaaggtccgatccgtggtcgttcctactgac
gattccgaagtaaaagcgcggctacgcgaacttggggagcctatctgtctgtttggcgaa
ggaccatctgaaaggcgaaatagattgcgtgaaatttatgcgcaacaggataccgtcgtg
gatcgtgttatacaggaacctgcgaatgaatcacagagtagtcaggtaatacaagatgtc
tggtatcatgaaggtccggactctttggcaccagccagacatcatattgcgttatactct
ctgaagaggcaaatgcgctatgctgcacgcattgaaagagcaaagcctgatcctgacaaa
gctgccaaggcacaggaattatataagagactaggtagaaccactattttttgtagtcaa
atcggtgactgtcgaccgatttccttttgtcaattttcgccggattgccaatatgttgcg
actgggtcatggtctggactttgcaagttgtggagtgtaccgcattgcgaacagatatgc
ttttgttttattcatccatatttttatctccctaccaaaataggacataacagtagaatc
ggcgctattgtttttcatccccaggcaactctcacgttatcttccaagtcagcttgtatg
gcatcatgcgatgctgagggatcagttaaactttggtcgttagaaagtgatactcctatt
cgaaatgtaagcactcatacgacgcgagtttctcgaatatgttatcatccatctggtaga
tatttaggatctgcttgttacgatcattcatggagactctacgatttagaagctgacaag
gaagtactgcatcaggaaggacacatgaaagaagtctattgcttagcgtttcaaattgat
ggtagtctctgctttagcggtggtctagatgcatacggaagagtttgggatttaagatcg
ggtcgctgcattatcctattagagggccatctcaagggcgtactttccatagattcagct
tcagatggataccaagttgcaacagcaagtgcagacaattctgtaaggatttgggattta
agaaatagaaaaaccatatatacaattcctgctcatagcgggctcgtgtctttcgtaaaa
tatgaaaataaccgcaattatttaatgtctgcgtcatacgataaaacggcaaagatttgg
tctaatccaggttggtcgcctcttcagacgcttacaggtcatgatgataaactgatgtgc
ttagatatatcgtcagatggtaaatactacgtgacctcctgctacgacaggacatttaaa
ctttggtcagcgtag

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