Trichoplax adhaerens (placozoan): TRIADDRAFT_22905
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Entry
TRIADDRAFT_22905 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_22905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_22905
03012 Translation factors [BR:
tad03012
]
TRIADDRAFT_22905
Enzymes [BR:
tad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRIADDRAFT_22905
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
TRIADDRAFT_22905
Translation factors [BR:
tad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
TRIADDRAFT_22905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_14
nSTAND3
AAA_23
ATPase
AAA_19
ABC_tran
pXO2-34
T2SSE
NACHT
DNA_pol3_tau_5
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
6751487
NCBI-ProteinID:
XP_002110272
JGI:
22905
UniProt:
B3RR36
LinkDB
All DBs
AA seq
981 aa
AA seq
DB search
MDRGRGRSFGRGGGGRGSYRGGNRGGGRGGGVGRPPGLSGKEIGMYYANLSRTRKKEKEK
IERAVIELDDGKQHAIASIVDQVEASCSLDNESSHHVDSDQQFSDSIQFLQRDPHLDNRL
KEELETKFKDPSYQKLLVSNSIFYTATFIFVDTHKFNNSCQAERQKLPIYAMHDDIMNLI
HSNQIVVISGQTGCGKTTQLPQFILDDAICSGNGSLCKIACTQPRRISAISVAERVLDER
IEKNQPNPSAGYQIRLENKLPRNQGSMIYCTTGILLRQLQNDPLLSQYSHLIIDEIHERN
LMSDFLLIYLKDILSKRPDLKVVLMSATLNAASFSSYFNNCPIVEIPGSLYSVRHYYMED
IISMLGNQKVYFQPKSNTRNSTRGRNRPYRSKESVEDNDWRDFLGFISDEYCLRTAQSVE
RMVFDDLDFELIEDIITYISDHMEKGAILCFLPGWEDIRKLYERLRLSPYFSSGRYLIIP
LHSQLSTVNQRKIFEKPLPSVRKIVIATDIAETSITINDVSFVIDCGKVKEKAYDPTSGL
EVLSPVWTSKASAQQRAGRAGRVKAGHCFYLYTQFHKSKMQEFQLPEMLRTPLEEICLQI
KKLKLGMIAPFLSKAVDAPDSEAVARAIALLKDLNGLNDDESLTPLGHYLAALPLNPRLG
KIIIFGALFSCLYPAVIISAFLGHRDPFVFVMDDREASRRARKSFEHDSISDHLTLFNAF
KSWKKAKYNRNDYDFCRSNLLSASGLNMVHKMADQFGDLLHEIGFIDTKDIKANRYNVNS
GNSNLVKAILCAGLYPNVIHVEHRQTNNKRPPKLSTRHDRAVFFHPSSVHHNRNFFSSKW
LIYHKKMKLDSQIKIFDATMVTPFSLLFFGGDIQVDESENTISIDTWIKFVADAGIAKLM
KQLRLQLDNCLKQKIKQPSLQLTASNDQSDPKAKLFQEIINLITREDLSQQVSNSHYTYV
YSYSSHLKEMSYKIFVARLVS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaggacgaggaagaagctttggacgaggtggtggtggtcgaggtagctatcga
ggtggcaatcgaggtggcggtcgcggtggcggcgtaggtagaccacccggcttgtctggt
aaggaaattggcatgtactatgctaatttaagtcgaacaaggaagaaagagaaggagaaa
atagaaagagctgtcattgagttagatgacggtaaacagcatgcgatcgcatcgatcgta
gatcaagtggaagccagttgtagcctcgataacgaatccagccatcatgtagattctgat
cagcaattttctgattcgattcaattcttacaacgagatcctcatcttgataatagatta
aaagaagaattagaaacgaaatttaaagatccaagctatcaaaaattgctcgtgagtaac
agtatcttctacactgctacatttatattcgtagatactcataaattcaataattcttgt
caggctgagaggcagaaacttccgatttatgcaatgcacgatgatattatgaatctcatt
catagtaatcaaatcgtagttattagtggtcagactggatgtggtaaaactacgcagtta
cctcagtttatacttgatgatgctatttgctccggcaatggatcattatgcaagattgct
tgtacacagccacgtcgaattagtgcaatatcggttgctgagcgtgttcttgatgaacgt
attgagaaaaatcaacccaatccgagtgcaggctatcaaattaggctagaaaataagcta
ccgcgaaatcaagggtcaatgatctactgtacaactggcattttactccgacaattacag
aatgatccgttactttcacaatatagccatcttattatcgatgaaatccatgagcgaaat
ttaatgtcggacttcttattaatctatttaaaagatattttaagcaaaaggcccgatcta
aaagttgttctaatgagtgctacgttgaatgctgctagcttttcttcgtattttaataat
tgtccaatcgtggagattcccggatcgttgtattctgttagacattactacatggaagac
attatctcgatgctaggtaatcaaaaagtatacttccagccgaaatcgaatacacgtaat
agcacacgaggtaggaaccgaccatatagaagtaaagaaagtgttgaagacaacgattgg
cgcgattttttaggattcatttcggatgagtattgcttaagaactgcacagtctgtggaa
cgaatggtttttgacgatttagatttcgaattaattgaagatataataacttacatatca
gatcacatggagaaaggtgctattttatgctttctgcctggatgggaggacattcgtaaa
ctttacgaacgattacgattaagtccctatttttcgtcagggagatacctaatcatcccg
ttgcattcgcaattatcaactgtaaatcaaagaaaaatatttgaaaaacccctaccttct
gttcgaaaaattgttattgctaccgatattgctgagacaagtatcaccatcaatgatgta
tcgttcgtaattgactgtggtaaagtaaaagagaaggcctatgatcccaccagtggccta
gaagttctttctccggtctggaccagtaaagcatcagcacagcaaagagcgggtcgagca
ggaagagtaaaagctgggcactgtttttacctttacacacaatttcataagtcgaaaatg
caagaatttcagttaccagaaatgttaaggactcccttggaagaaatatgcttacaaatt
aaaaagcttaaattaggtatgatagcaccgttcctatcgaaagcagtggatgcaccggat
agtgaagcagttgctcgagctatagctcttttaaaggatttgaatggtttaaatgatgac
gaatcgttaactccactcggacattatcttgcggcactcccacttaatcctcgcttaggg
aaaattattatatttggcgcactgttttcttgtctatatcctgctgtaataatatcggca
tttttaggtcatagggatccttttgtatttgttatggacgatagagaggcctcaagacga
gcacgtaaaagcttcgaacatgattcaattagtgatcatttgacactgttcaatgccttt
aagtcgtggaaaaaagctaaatataaccgaaatgattatgacttttgccggagtaacttg
ttgtctgcaagcggccttaacatggttcacaaaatggcagatcaatttggtgatctctta
cacgagattggatttatagataccaaggatataaaggcaaatcgttataatgttaattcc
ggcaatagtaaccttgttaaagcaatcttgtgtgctgggttatatccaaacgttattcac
gtcgaacatagacaaacaaataacaagaggcctcctaaactttcaacgagacacgacaga
gcagtgttttttcatcccagctcggtccaccataatcgaaatttttttagtagtaaatgg
ttaatataccataaaaaaatgaaattggatagtcagattaaaatatttgatgccacaatg
gttactccgttttctctattatttttcggtggtgatattcaagtagacgagtctgaaaac
actatctcaatcgacacatggattaagtttgttgctgatgctggcatcgctaaattaatg
aagcaattaagactccaactggacaactgtttaaagcagaagattaagcaaccatcactg
caattaactgcatcaaatgatcagtctgatcctaaagctaaattgttccaggagattatt
aatcttattacacgcgaagatttatcgcagcaagtaagtaatagtcattacacgtatgta
tattcatacagtagtcatttgaaagaaatgtcttataaaatttttgtcgcacgactcgta
agctaa
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