KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_23559
Entry
TRIADDRAFT_23559  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03018  RNA degradation
tad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRIADDRAFT_23559
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIADDRAFT_23559
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_23559
   03041 Spliceosome [BR:tad03041]
    TRIADDRAFT_23559
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRIADDRAFT_23559
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TRIADDRAFT_23559
Spliceosome [BR:tad03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    TRIADDRAFT_23559
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 6753096
NCBI-ProteinID: XP_002111883
JGI: 23559
UniProt: B3RUN2
LinkDB
AA seq 84 aa
VSVITQDGRVIVGTLKGFDQTVNLILNDSHERVYSSGAGVEQVALGLYVIRGDNIAVIGE
IDEDVDSSIDLAEVKAEPINAVVY
NT seq 255 nt   +upstreamnt  +downstreamnt
gtgtcagttattactcaggatggtagagtaattgtgggtacgttgaaaggtttcgatcaa
acggttaatttaatcctaaatgatagccatgaaagagtgtactcttccggcgctggtgtg
gagcaagtagcccttggcctatatgttattcgtggcgacaatatagccgttataggagaa
attgacgaagatgtagactcttccatcgatctagctgaagtgaaagcagaacctattaat
gctgtagtgtactag

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