Trichoplax adhaerens (placozoan): TRIADDRAFT_23606
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Entry
TRIADDRAFT_23606 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_23606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_23606
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIADDRAFT_23606
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRIADDRAFT_23606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
NOT1_connector
DUF3819
CNOT1_HEAT
CNOT1_1st
CCDC53
Motif
Other DBs
NCBI-GeneID:
6752698
NCBI-ProteinID:
XP_002111977
JGI:
23606
UniProt:
B3RV73
LinkDB
All DBs
AA seq
2242 aa
AA seq
DB search
VDTDPLSLALSQITHLVTNLNKKTAKSHTLELAQLVERYGTEAEKHLYRVLFSQIDFNAD
NKGSGKDFYQIQLLSQECSGLVTKANVATILSYAIDEPLPKQKSLQPSPQLLSRISQVLK
LSKIQEIVIGLGLIHASNIELKTQAERFLKEKLPELLQSYIDSDVGSNEDGLGDIAVEVI
HQLLCYIIDNSSEKTGISNTQADAFIEMLRQDFPRDRVPILLDPLLYHDYTTTDSDINLL
KSTGFSSIPIKDELCDIMAEIGYGCCASIEEAKKVLDLIPYETLKPAAVAKVLGIMIRTC
NAADQMPIQNLTNNTNSWEKEKQQDLSSSSNSWNVTVFIEAVKDVVPSMNWMEVIAKLDY
PGFVISDVEGLRLILHAYRIGQQDTFPIDLIYRNWKNTEGQLSFIEQSLRHPEVLCFGDY
PCHTVVTDILKAPPEEGNKHIANWQSLNLVETLLRLGECGHYDRVLSLFAYPAKICPDVL
LLSLLQTNPTWHTLRNELVAMIMPVFLGNHPNSSSVLHYAWHGQGQSASIRQLILHCMAN
WYMQDDPFDQTRLSRILDVSQDLKALSLLLNTGPFPFVIDLAALAARREYLKLDKWMTDK
MKEHKDEFIRACISFLDRRAPSLLISQNSGRDLPKSAILPTDTVTTMLIVLQSQLGSIDE
ENTKAVKLMIANHTPMHTKKPSQAINIPKPSETKASVINQPSSSNPQSHPTVSDLSAVWS
GADNTFTKSVEDEANAYFQKLYNRLPEPTISINEMLSLLKKFKDSTVKKENDIFHCMLRN
LIEEYKYFPQYPDLELHTTAVLFGGIIEQGLVTYMDLGVALRYVLEALKKPPNSKMHKFG
ITALDRFKNRLKDYPKYCDHLAVIPHFREFPPALVAYVEYGKQSQEPPVQPATTEDSEQN
TQVLAQVSSSMSDSGTKPVISTVMKPPVEQTLSIAGATNIGTLLAAIDVPFEQPPNATQD
KFHFIFNNLSNSNVKFKCEELKGLVGAKYRLWFSRYLVMRRVSIEHNFHTLYSSVVEAYN
SKELYQDVLHETYRNIKVLLKMEKNSNEYSDRVILKNLGHWLGILTLARNKPILYKEMDI
KSLLIEAYFKGEQEMLFVIPFVTKVLDSVNQSRVFKPPCPWIMAILGVLVEIHQVPNLKL
NIKFEVEILCKNLNIAIEDIPKFDVLQDPERLNRLKRHQLDNPMKGPKNGKFVFFSGEVT
YILQLLNNVVDFIGGQQQIQHVIPNEGTHPPPSINYNKLSATVAGLSSGIVINNQLRLFQ
QNPHLKSYVKVAIERAVQELLLPVAERSIKIVINTVEKLIKKDFALDPDETHLKTGSHNM
LRYFTAGMALITCREALHMAISNNLKSAFMSNLRNTSNMKDIIEEAATIIANENTEHACA
FVQKSAVDKALLEINKALAAEFEIRKHARSEGRRYYDHAVLQYQAERMPEAIRLKVGGPG
SQKQTIYDDFAKNVPGFAPITDSTIAISQGFPELTALSQPSNPTDELNIILDECGSELQH
HLIALKNTSPKPQVLALRSLLDAVVQIRMNQNGTELTSLITKCVENLMELLVASESELNM
RFRAGHVMLLKALQDPKACGPAWTAKCITRFICECREEYRWNVEAVEILIRSRLVVMKDF
DSYLAQSINNSSNYTVASFALQLIGKFLNDPQDNIKESDFYRTLETLNRIAQPNRQSREE
DTPVRSNPSHETPSSLPAASSIVRGNPGDSDQAALFEKTEFLLREWVRLYLQPVSGRDSE
RAFAVFANQLHQHGMLKNDEMLLRFIRVSVEICVELTYRNLHDNAHSRIKLFQTLDAFGR
LVVLIVKHAGEPSNSKISMLNKILGLIAGVLMQDHDMRHADFHQLPYHRILVMLLEELNG
VDQVLENLNSAILSALCNMLHALRPHRVPGFSYSWLELVSHRIMISRLLGTSQQKGWAHF
QQLLLDLFKFLAPFLRNAELAKQTQLLYKGTLRVLLVLLHDFPEFLCECHFAFCDVIPPN
CIQLKNLILSAYPRSMRLPDPFGPNLKVDMLPEINHAPRVLNNFTAAIQPQTFRKDLDSY
LKNRQPVTFLSEMRSAVQMPSEPGTRYNMPLINALVLYVGTQAIQFIRNKNLSISLSTIT
HSAHMDIFQNLAVLDNEGRYLFINAICNQLRYPNSHTHYFSCTLLYLFMEANSEAIQEQI
TRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWSHSFVHCAPEIEKLFESVARSCMQSK
QAPQIQQARPISVSKEAGEVQE
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
gtggacacggatccactgtccttagcactttcacaaattacccatttggtaactaattta
aataagaaaactgccaagtcgcacacacttgaattagctcagcttgttgaacgctatggc
accgaagcggagaaacatttgtaccgtgttttattctcacaaattgatttcaacgcggat
aataaaggtagcggtaaagatttctatcagatccagctgttatcgcaagagtgtagcggt
ttagttacaaaagctaatgtagcaactatcttaagctacgccatagatgaacctttgccc
aaacaaaagagccttcaaccgtcacctcagttattatcccgaataagccaagttttgaaa
ctaagcaaaattcaagagattgtaatagggttgggcttaatccatgcatctaatattgaa
ctgaaaacacaagcggaaaggtttttaaaggaaaaattaccagaactgttacagtcttac
attgattccgatgttggtagcaacgaagatggcctaggtgatatagcagtagaagtgata
catcagctactctgctatatcattgataactcttcagaaaaaaccggaattagtaatacc
caagcagacgcttttattgagatgttaagacaagactttccaagagacagagtaccaatc
cttctcgatccactactgtaccatgactatacgacaactgacagcgatataaatttatta
aaatctactggttttagtagtattccgataaaagatgaactatgtgatatcatggcagaa
attggttatggttgctgtgcgagcatcgaagaggcaaagaaagtattagatttgatacct
tacgagactttgaaaccggctgcagtcgcaaaagtacttggaataatgattcgaacatgt
aatgctgctgatcagatgcccatccaaaatttaactaataatactaattcctgggaaaag
gaaaaacagcaagatttatcatcatctagtaattcttggaatgttactgtctttattgaa
gctgttaaagatgtagtcccgtccatgaactggatggaagtaattgctaagctagattat
cctgggtttgttatctctgatgtagaaggactccgtttaattttacatgcctatcgtatt
ggtcagcaggatacatttccaatagatctcatttatcgaaattggaagaatactgaaggc
cagctatcattcattgagcagtcactgcgtcaccctgaagtattgtgctttggagattat
ccatgtcataccgttgttactgatatattaaaggctcctccagaagagggaaataaacat
atcgcaaattggcagtcactaaatttagtagaaacattgctaagacttggcgaatgtggc
cactacgatcgggtactatcattatttgcttacccagcaaaaatttgccctgatgttctt
ttgttatctttactgcaaactaaccctacttggcatacactaagaaacgaattagttgca
atgattatgcccgttttcttaggcaatcacccaaactcttcaagtgttcttcactacgca
tggcatggtcagggacagtcagcatctattcgtcaattgattttgcattgtatggcgaat
tggtatatgcaagacgatccttttgatcaaacaagactatcgagaatactagatgtttca
caggatctcaaggctctatctcttttgcttaatactggtcctttcccctttgtaatcgat
ttagcggcattagccgctagacgagagtacctaaaattagataaatggatgaccgacaag
atgaaagaacataaagatgaattcattcgagcttgcatttcatttctagatagaagagcg
ccttctttgctaatctcgcaaaatagtggaagagatttacctaagagtgctattttaccg
acagatactgttacaactatgttaatcgttctacaaagtcagttaggaagtatcgatgag
gagaacacgaaagcggttaagcttatgatcgctaatcatactcctatgcatacaaagaaa
ccatctcaggcgattaatattccaaaacctagtgaaactaaggcttcggtcatcaatcag
ccatcaagttcaaaccctcaatcgcatcctacagtttccgatttatcagctgtatggtca
ggtgcagataatacttttactaagagcgtagaagatgaagctaacgcttactttcaaaaa
ttatacaatcgtcttccagaacctacaatttctattaatgaaatgttgagtttattgaaa
aaattcaaagattcaactgtaaaaaaggaaaatgatatcttccattgtatgttacgtaat
ttaatcgaagaatataaatattttccgcagtatcctgatttggagttgcatactacggca
gtcttatttggtggaattatagagcagggtttggtgacttatatggatttaggcgtagcg
ctaagatatgttttagaagcgttaaaaaagcctccaaatagtaaaatgcataaatttggt
attacagctttggacagatttaaaaatagattaaaagattatccaaaatattgtgatcat
cttgctgttattcctcactttcgtgaatttcctcctgcgttggttgcttatgtagaatat
ggcaaacaatctcaagagcctcctgtacaaccagctactactgaagactctgaacaaaat
actcaggtattagcacaggtgtcatctagcatgtcagattctggaacgaagccggtgata
tcaacagttatgaaaccacctgttgaacaaacactatccatcgccggtgctaccaatatt
ggtactctcctggctgcgattgatgttccgttcgagcaacctccgaatgctactcaggat
aaattccatttcatctttaacaatttatctaattcaaacgttaaatttaagtgcgaagaa
ctaaaaggattggttggggctaaatacagactatggtttagtcgttatttagttatgagg
cgagtcagtattgaacataattttcatactctttactcgtcagtcgttgaagcgtataat
tcgaaagagttgtatcaagatgtattgcatgagacctatagaaatattaaggttttgcta
aaaatggaaaagaattcaaatgaatattctgatcgtgtgatattgaaaaatttgggccat
tggcttgggattttaacgttggcacgtaataaaccaatcttgtataaagaaatggatatc
aaatctcttttgattgaggcttactttaagggtgaacaggagatgctatttgttattccg
ttcgttactaaagtactcgatagcgtaaatcaaagtagggtatttaaacccccttgtccc
tggataatggctattttgggtgtattagttgaaattcatcaagtaccaaatctaaagcta
aatattaaattcgaagtggaaatattgtgtaagaatttaaatattgccattgaggatata
ccgaaatttgacgtattgcaagatccagagagattgaatagactaaaacgtcatcagctt
gataatccaatgaaaggacccaagaatggtaaatttgtatttttcagtggtgaagtaact
tatatattgcaattacttaataacgtggtggattttataggcggtcagcaacaaattcaa
catgtgattccgaatgaaggaactcatcccccgccttcgatcaattataacaaattaagt
gcgacagttgccggattatcatctggtatagtcataaataatcagttgcgcctatttcaa
caaaatccgcatttaaaaagctatgtaaaagtcgctatagaacgtgcagttcaagaatta
ctccttcctgttgctgagcgctctatcaaaattgtaataaataccgtagaaaaactaata
aagaaggattttgccttagaccctgacgaaacccatcttaaaacagggtctcataatatg
ttacgctacttcactgctggcatggcattgattacctgtcgtgaagcgctacatatggcc
atttctaacaatctaaaatctgcttttatgtctaacttaagaaatacttcaaacatgaaa
gatataatagaagaggctgcaacgataattgctaatgaaaataccgaacatgcgtgtgct
ttcgtacaaaagtctgcggttgacaaagctctcttagaaattaataaagcattagctgcg
gaattcgaaataagaaagcatgcacgcagtgaaggtcgacgttattacgatcatgctgtt
ttacaataccaggcggaacgaatgcctgaagcaatccgattgaaagtcggtggcccggga
tcacaaaagcagactatctatgacgattttgctaaaaatgttcctggttttgctccaata
accgattctacaattgctatttctcaaggatttcctgagctgacagctttatcacaacca
tcaaatccaaccgacgaattaaatattatcctggacgagtgcggatctgaattacaacac
catcttattgcactcaagaatactagtccgaaacctcaagttcttgcattgcgttcatta
cttgatgctgtagtacaaataagaatgaatcaaaatggaacagaacttacatcattaatc
actaagtgtgtagaaaatcttatggaacttctggtggcttcagaatctgaactaaatatg
cgatttagggctggtcatgtgatgctgttaaaagcgttacaagatccaaaagcttgtggt
ccggcttggacagcaaaatgtataactagatttatttgcgaatgccgagaagaatatcgt
tggaatgttgaagcagtagagatcttgatccgtagtcgattggttgttatgaaagatttt
gattcgtacttggcgcagtctataaataatagcagtaactatactgttgcaagttttgcg
ttgcaattaattggcaaatttttaaatgacccacaagataacatcaaagagtcagacttt
tatcgaactttagagacattaaatcgtattgcgcaacctaacagacaaagtagggaagaa
gatacgccagtacgatctaatcctagccatgaaactccaagcagtcttcctgctgcaagt
tctatcgtacgaggaaatcctggagatagtgatcaagcagctctatttgaaaagactgaa
tttttgttacgtgaatgggtcaggttataccttcaaccagtatctggaagagatagcgag
agggcgtttgcagtttttgctaaccagctacatcaacatggtatgctcaaaaatgatgag
atgctactaagatttatccgtgtgagtgtggaaatttgcgtagagttgacttatagaaat
cttcacgacaatgcgcattctcgaatcaagttgtttcaaactttagatgcgtttggccga
ttggtagtcctaatcgtaaaacatgctggcgaacctagcaatagcaaaattagtatgctc
aacaagatacttggactcattgcgggagtcttgatgcaagatcatgacatgcgtcatgct
gattttcatcaactgccgtatcatcgtattttggtgatgttgcttgaggaacttaacggg
gttgatcaagttttagaaaatttaaattccgcaattctttctgcactttgcaatatgttg
catgcactccgaccgcatagggtgccaggtttctcttattcttggttagaattagtatct
cacagaataatgatatctcgattactaggcacttcccagcagaagggatgggcacatttt
cagcagttgctacttgacttattcaaattcctagctccatttctacgcaatgccgaacta
gcgaaacagactcaacttctttataagggaaccttgcgggttttacttgtactgttacat
gattttcctgaattcttatgtgaatgccattttgcattttgcgatgtgatccctccaaat
tgtattcaattgaaaaatttaatattaagtgcatatccgcgaagcatgcgattgcctgat
ccgtttggcccaaatctgaaggttgacatgttgccagaaataaatcacgctcctcgcgta
ctgaacaacttcactgctgccattcaacctcagacatttagaaaagatttagattcttac
ttgaaaaatcgtcaaccagtgactttcttgtctgaaatgagaagtgcagttcagatgcct
tctgagccaggaacgcgttataatatgcctttgataaacgctctggtgctatatgttgga
actcaagcaattcaatttattcgaaacaaaaatttatctatttctttatcgaccattact
cattctgctcacatggatatttttcagaatcttgccgttctagataacgaaggtcgatat
ttgtttataaatgcgatttgcaatcagcttcgttatccgaatagccatacgcattacttt
agttgtactctactgtacttatttatggaagcaaattctgaagctattcaagagcaaatt
actagggtattgctggaacgacttatagtgaatagaccacatccttgggggctattgata
acatttattgaattgattaaaaatccaatttataaattttggtctcatagctttgtacat
tgtgccccagaaatagaaaagctattcgaatctgtagctcgaagctgtatgcaatcaaaa
caagcgccacagatccagcaagctagaccgatttcggtatctaaagaagctggcgaagtt
caagaataa
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