Trichoplax adhaerens (placozoan): TRIADDRAFT_23688
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Entry
TRIADDRAFT_23688 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRIADDRAFT_23688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tad03009
]
TRIADDRAFT_23688
Ribosome biogenesis [BR:
tad03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRIADDRAFT_23688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
Utp13
WDR55
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_HPS5
WD40_like
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Cytochrom_D1
Utp12
RPN13_C
Motif
Other DBs
NCBI-GeneID:
6753373
NCBI-ProteinID:
XP_002111646
JGI:
23688
UniProt:
B3RW67
LinkDB
All DBs
AA seq
813 aa
AA seq
DB search
SYSVTSHLEPIFTGGTLQFSSSAQHIFCTFGTKVQVVDIKTGAVTTSFDEDEDIITCLAV
TPDDKWLLTCSQNLLLRQWNWQEKSCTRAWKSAHVGPVVAMEFDASSTLLATGSSDSTIK
IWDISSNYYTHNLKGSQGVVNTISFHPDPAILHLFSAADDYKIRQWDLKSSKCIRIFEGH
YSSISSLAFSHDGKTLLSGGRDNVVNLWDIASKSLLKTIPTFEIVESVVVLPSDINFPGK
ESNNSMHYITVGNKGVIRIWRANDSRCVHQLSPSNFSNSELAAFTQISYLKPTNSLALVT
FDHNVMIYDVEDLKLKKLLIGHNDEIVDASFVCKDDSHIVVATNSPDLRIFQHATMSCQM
LFGHTDTILSLDVSYDRQLIATSSKDHTIRVWKAFHDSFRCVAVASGHTSAVPAVAFSRL
VDTFIVSGSNDYTMKVWTLPASFDEVWFKFYKLNVQSLTATVTEISHKKDINSIDVSPND
KLIATASQDKTAKVWLVSDGSLLGSCVGHKRGLWSVQFSPIDQCIATCSSDSNIKIWSVI
DFTCVKTFEGHSNSVLKVSFVTRGMQLLSSDSDGLIKLWTIKSNECENTFDHHTDKVWAI
KPNSTEEYFVSGGADSSLAIWKDMTAIEREKKIAEEEELIAKEQELSNLLHAKKFTEALN
MAIGLEKPFLTLTVVKTILDQPDGLESIDNVIQKLDKKHVNTIFQYLSTWNTNAKHSRAA
QIVLSIILKNTIPEDLIKMPSMQTTLEALIPYTERHYQRLERLLEVIFVIVVANLVYFSM
HKIKFYLCVLISVAKLFHRIYLTVYEFSNIFTY
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
agctattccgtcacatcgcatttagagcctatatttactggtggcactctccagttttcc
tcgtctgcacaacatatcttttgtacctttggcaccaaagtccaggtggtcgacataaaa
actggagcagtaacgacatcatttgatgaggatgaagatatcataacctgtttagctgtt
actcctgatgataagtggctgttaacatgcagccaaaatttattacttcgacaatggaat
tggcaggaaaagtcttgtactcgtgcttggaagtccgcacacgtaggacctgtggtagcc
atggaatttgatgcttcgtcgacactactagcaacaggatccagcgatagcactataaaa
atttgggatatcagtagtaattactatactcataaccttaaaggatctcaaggagttgta
aacacaataagctttcatcccgatcctgcaatcctacatttattttctgctgcggatgac
tataaaattaggcagtgggatttgaaatcgagcaaatgtattcgtatctttgaaggccat
tacagttctatatcaagtttagcttttagccacgatggtaaaacacttttaagtggtgga
agagataatgtcgtcaatttatgggatatagcttctaaaagcctacttaagaccattcca
acattcgaaattgttgaatcggtcgtagtccttccgtcagacataaattttcctggcaaa
gaaagcaataattctatgcattatataaccgttggcaataaaggtgtaattcgcatctgg
agggctaatgatagtcgatgtgttcatcaattatctccatcgaacttttcaaattccgaa
ttggctgctttcactcagatatcatatctgaaaccgactaattcattggctttagttaca
tttgatcataatgtgatgatttacgatgtagaagacctaaaattaaagaaactgttaata
ggccataatgacgaaatagtggacgcaagttttgtgtgtaaagacgatagtcatatagtg
gttgcaacaaatagtcccgatctacgaatatttcagcatgctaccatgagttgtcaaatg
ctatttggtcatacagatacaatactgtccctggacgtatcgtatgatagacaactgatc
gctacatcttctaaagatcatacaataagagtttggaaggcgtttcatgactcttttcga
tgtgttgcagttgcttctggccatacttccgcagtacctgcagttgccttttcaaggttg
gtcgatacgttcattgtcagtggaagtaatgattatactatgaaagtttggactttacct
gctagtttcgatgaggtatggtttaagttttacaaattaaatgtacagtctttaacagct
actgtaacagaaataagccataagaaggatattaactccattgatgtatcaccaaacgat
aagctaattgccacagcatctcaagacaaaactgcaaaagtatggctcgtttctgatgga
tcactgctgggaagttgtgtcggtcacaaacgagggttgtggtctgtacaattttctccc
atagatcagtgtatcgcaacgtgttcaagcgattctaacattaagatttggtctgttatc
gactttacttgtgtcaagacttttgaaggccattctaactctgtacttaaagtaagcttt
gtaactcgggggatgcagctgttgtcaagtgactctgatgggttaattaagttatggaca
attaaaagcaatgaatgtgaaaatacttttgatcatcacacagataaggtatgggctata
aagcctaactctacggaagaatactttgtatctggcggtgctgattcaagtttagctata
tggaaggatatgaccgctattgaaagagaaaagaaaattgctgaggaagaggaattaata
gcaaaggagcaagaattatcaaatcttttgcatgctaagaaatttacagaagctctcaat
atggctattggtttagaaaaacccttcctaaccttgacagttgtcaaaactattctcgat
caaccggacggtctggaaagtatcgataacgttattcaaaaattagataagaagcacgta
aatacaatattccagtatttgtcgacttggaatactaatgctaagcattcaagggctgct
caaattgttttatctataattcttaagaatacgatacctgaggatttaattaaaatgcca
agcatgcagaccactttagaagcgcttataccatatacagaacgtcattatcaaaggctc
gagcgactgttagaggtaatcttcgttatcgtagtagctaacctggtgtattttagtatg
cataaaattaaattttatctttgcgttttgatttctgtagcaaagctatttcatagaata
taccttacagtgtatgaattcagcaacattttcacttactaa
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