Trichoplax adhaerens (placozoan): TRIADDRAFT_24207
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Entry
TRIADDRAFT_24207 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03013
Nucleocytoplasmic transport
tad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRIADDRAFT_24207
03015 mRNA surveillance pathway
TRIADDRAFT_24207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_24207
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TRIADDRAFT_24207
mRNA cycle factors
P-body specific factors
TRIADDRAFT_24207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
KaiA_N
Motif
Other DBs
NCBI-GeneID:
6753086
NCBI-ProteinID:
XP_002111381
JGI:
24207
UniProt:
B3RUL5
LinkDB
All DBs
AA seq
1052 aa
AA seq
DB search
SRPEESFFRSLDSSVKRNTTFVKKLRTLSDQQRDSIFKDAQSLNLTKYVPEVVSAILESK
MKLSDVSCAIQICCLMHQRYSEFATLLLKGMQSSFTETKDDDKSVKIARYRVTLRLLGEL
IIIGVFNESTNGTDILHSAFSGIITIDKATFDYLPVVISFCRHFCEDFFGITPRKNRLLI
EKFNFQAPASKIISDNKKKQFRLVVFDYHAALVKYLEKQHKEIQRMTRQNLKILHTKGEL
NEERKENLEKSKKSFEKLHVHTGTISDILDLDMPDLPQDEQLEEAESFGISLYCPFPASE
LNGDYLWEDEETRSFYENLKDLKTLMPAILFKESESSGDTSAESNEANFIQNNIKLETID
EISESIENLGIQDELKDNNPETSDESKVDESMTSLFDTYLRQLATCRNRDFIDEAATEFI
TNFNTKGNRKALVRSLFNVPRTRLDLLPFYARLVATLTACFSEIGPSLNVMLMKDFMYRV
RKKDQIHLEEKIKAARFIGELTKFRIISKDEALLCLKVALNNFTHHVIDMACCLLETCGR
FLLRNPDSHIRTKNLLETMMRIKSARHLEERYVIMIENAYYHCLPPEDEKVEVRTPLQEY
IRRLVIKHLITTNVEKILRQFRKLSWNNQEIADYAIKFLSSPWYIKYNNIHNLANLLSGL
AEYREDVAVMVVDNIMEEIRLGLEINAMKLNQRRIATIKYLGELYNYQMIEADVIFNTLY
SLITFGLLKDHSSNDIDPPDNFVRLRLVSVLLDTCGEFFDRGFKKSRLDCFLVYVQHYFW
QKKSNVYWETQTFPIEIENLLLDLLDSLRPKLKPCNNLTEAKGAIEELEQNLLLIVSLST
NNNVDLEDQHRQRHTSSGSQSHDTPTQDDAEGQDVDIAEELEADDTDAHKSQSDTEDVLF
DDRDEIAEGENEDVTILSGGLKAMPCEEDDDFQKEYEKALADDLLTRRQHGPKVPSLDAP
LPFNRICNFSVSFISNIYFNVGENLQTDDINFVLLTRKSNKLQYKEVNIPVSDAVAANIR
EKIAQEKADKEEMKRLVLSHDKRQQEESFNGN
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
agtagaccagaagagtctttctttcgatcgctggattctagtgtaaaaagaaatacaacc
ttcgttaaaaaactgcgcacacttagtgatcagcaacgtgactctatctttaaagatgca
caatctctcaatctcactaaatacgtaccggaagtggtgtctgctattttagaaagtaaa
atgaagctatccgatgtttcctgcgctattcaaatttgttgtttgatgcaccaacgttat
tctgaattcgccactctattgctgaaaggaatgcaatcaagcttcaccgaaactaaggac
gatgataaatcagttaagatcgctcgctatcgagtcactttacgactactaggcgagctg
ataattatcggagtattcaatgaaagtacaaacggtaccgatatcttacattctgccttc
tctggtataattacaattgacaaggccacctttgattatttaccggtagtaattagtttc
tgtcgccatttttgcgaagacttttttggaataactccaagaaagaaccggctgttaata
gagaaattcaactttcaagctccagctagtaaaatcatatcggacaacaaaaagaagcaa
ttccgtttggtagtttttgattatcatgctgcgctagtcaaatatctggagaaacagcat
aaagaaatacagagaatgacacggcagaacttgaagatattgcatacaaaaggagagttg
aatgaagaaagaaaggaaaatttggaaaagtcgaagaaatcatttgagaaattgcatgtt
catacgggaacaatatcggatattttagacttagatatgccagatcttcctcaagacgag
caactagaagaagctgaatctttcggaatttccctttactgcccctttccagcttcagag
cttaatggtgattatctttgggaagatgaagagactagatcgttttatgaaaatctaaag
gacttgaaaactcttatgccagcgatcttattcaaagagtctgaatcttcaggagataca
agtgccgaatcaaatgaagctaactttatccaaaacaacatcaaactagaaacgattgat
gaaatcagtgaaagcattgaaaatttaggcattcaggatgagttgaaagataacaaccca
gaaacttctgatgaatcaaaggtggacgaatcaatgactagtcttttcgatacctatctg
cgccaacttgcgacatgtagaaatcgagactttattgatgaagcagcaacagaatttatt
actaactttaatacaaaaggcaacaggaaagccttagtacgctcattgtttaatgttcca
aggacaagactggacttactaccattctatgcaagattagtagcaactctaactgcatgc
ttttcagagattggtccatctcttaatgtaatgcttatgaaagattttatgtatcgggtt
aggaaaaaagatcagatacatctggaagaaaagataaaggctgcccgttttatcggtgaa
ttaacaaagtttagaatcatttctaaggatgaagccctactatgtttgaaagtggcttta
aataattttactcaccatgttattgatatggcctgctgtttactggaaacttgtggacgc
tttctcttgcgaaatcctgattctcacattcgaactaaaaatctactggaaacaatgatg
agaattaaatcagcacgccatttagaagagcgttatgtaattatgattgaaaacgcttac
taccattgcttgccccccgaagatgaaaaagtggaggttcgaactccattacaagaatat
ataagaagacttgtgatcaaacatctgattactacaaacgtcgaaaagattttacgacag
tttcgaaaactatcatggaataatcaagaaatagcggactatgcaataaaattcttatcg
tcgccttggtatataaaatataataatatccacaacctagctaatctgctgtccggtctt
gcggaatatagggaagatgttgcggtaatggttgttgacaatatcatggaggaaattagg
ctgggtttagagattaatgcgatgaaattaaatcaaaggcgcatcgctactatcaaatac
ctgggagaattatataattaccaaatgattgaagccgatgttattttcaacactctctat
tccctaatcacttttggattgcttaaagaccacagctctaatgatatcgatcctccagat
aattttgtacgattgcgattagtttctgttttgttggatacgtgtggagaattcttcgat
agaggatttaagaagagtagacttgattgctttcttgtatatgtacagcattatttttgg
caaaagaagagcaatgtttactgggagacgcaaacgtttccaatagaaatagagaattta
ctattagacttattggactccttacgtccaaaactgaaaccgtgtaataatctgacggag
gcgaaaggagccatagaggaactagagcaaaatttgctccttattgtatctttatcaact
aataataacgtagacttagaagatcaacaccgtcaacgacatacatcttcgggctctcaa
tctcacgatacacctactcaagatgatgcagaagggcaagatgttgacattgctgaagaa
ctagaggctgatgatactgatgctcataaatcacaatccgatacagaagatgttttgttt
gacgacagggatgaaatagctgaaggagaaaatgaagacgttactatactttctggtggt
ctgaaagcgatgccttgtgaggaagacgacgattttcagaaagaatatgagaaggcatta
gcagacgatttactgacacgacgtcaacatggtcctaaagttccatctttggatgctcca
ttgcctttcaatagaatatgtaattttagtgtgagctttatttctaacatttatttcaac
gtaggcgaaaatctccaaactgacgatataaatttcgttttattgactcgtaagtcgaat
aagctacagtataaggaagttaatattccagtatcagatgctgtagctgctaacattcga
gaaaagattgctcaagaaaaagctgacaaagaagagatgaaacgacttgttttaagtcat
gataaacgtcaacaagaagagtcctttaacggtaactag
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