Trichoplax adhaerens (placozoan): TRIADDRAFT_24936
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Entry
TRIADDRAFT_24936 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIADDRAFT_24936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tad03019
]
TRIADDRAFT_24936
Messenger RNA biogenesis [BR:
tad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TRIADDRAFT_24936
mRNA degradation factors
3'-5' decay
Pan complex
TRIADDRAFT_24936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Dimerisation
Motif
Other DBs
NCBI-GeneID:
6754018
NCBI-ProteinID:
XP_002112381
JGI:
24936
UniProt:
B3RXU2
LinkDB
All DBs
AA seq
465 aa
AA seq
DB search
MAPHSGQEGNKKPTKHYFMNHNFKQELLVQRLLRLAEVNPDEFGLPREVKHYNSLYPLEM
NQQDGISSNFGYRTICFKAINSHNGQTYLLRRVIGSFRASQSTSLEVINKWKKIKHSGIV
QLHEVFTTKAFGDNSLIAIYDYYPANETMQSHYFDTTKQSYTIGEDGVLRADVNMARNNI
EFLDENIIWKYVIQLTSALRLIHVAGLACQILNVTKVLVASRSRLRINGVGILDILGNDS
LNRSAIASRQMTDLTSLGRLLLALACRSLAALDPENYSQSLDFVANNYSSDLRDLIFGLL
TCQQHMPQVVHKIKSVNDVMPLIGARFYTHINDLYFENDILEVELENELENDRLVRLLLK
LGIVNDRPEFFLDGDWSETGDRYLLKLFRDYIFHQVKQDGSPWIDMAHMIQCLNKLDVGS
QDRICLSSRDEKSVLVVSYKDLRDCFERTINEVFVAAGIKNPARG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcattctggccaagagggcaataaaaaaccaaccaaacattacttcatgaat
cataattttaagcaagaattacttgttcagagattattgagattggcagaagtcaatccg
gatgagttcggattacctcgcgaagtcaagcactataattcgttgtatccactggaaatg
aatcagcaagatgggatatcttccaattttggatatagaactatttgcttcaaagctatt
aattctcacaatggtcaaacctatctactgcggcgtgttattggtagcttccgcgcatca
caatcgacatcattggaagttattaataaatggaagaaaattaaacatagcggaatcgta
caacttcatgaagtatttaccaccaaagctttcggagataattcactgattgctatatac
gattactatcctgcaaatgaaaccatgcaatcgcattattttgatactacaaagcaatca
tatactattggtgaagacggtgtacttagagctgatgtaaatatggcccgaaataacatt
gaattccttgatgaaaatattatttggaaatatgtaatccagttaacttcagcattacga
ctaatccatgttgctggcttagcatgccaaattttaaacgttactaaagttttagttgca
agtcgctccagactaagaattaatggcgtaggcattttagacattttagggaacgacagc
ctaaaccgaagtgcaattgcttcacgtcagatgacagatttaacatcactcggtcgactc
ttgttagcactcgcttgccgctccctggcagcattagacccagaaaattattcacaatcg
ttagactttgtggctaataactattcttccgatttaagagatttaatatttggtctgttg
acttgccaacagcatatgccacaagttgtacacaaaatcaagagcgttaacgacgtaatg
cctttgattggggcacgattttatacccatattaatgacctctattttgaaaatgatatc
ttggaggttgaactggagaatgaacttgagaatgatcgcttagtaagacttctcctcaaa
ttaggaattgttaacgacaggcccgaattttttctagatggcgattggtcggaaactgga
gatagatatttactaaaactgtttagagattatatattccatcaagttaagcaagatgga
tcgccttggattgatatggctcatatgattcaatgcttgaacaagctggatgttggtagc
caggatcgaatatgtttgtcatcgcgtgatgaaaaatcagtcttagtggttagttataaa
gatcttagagactgtttcgaaagaacaatcaatgaagtgtttgtagctgcaggtattaag
aaccctgctagaggataa
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