KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_26233
Entry
TRIADDRAFT_26233  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRIADDRAFT_26233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tad03019]
    TRIADDRAFT_26233
Messenger RNA biogenesis [BR:tad03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TRIADDRAFT_26233
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_TEP1_C eIF2A WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_WDR11_2nd CFAP43_N
Other DBs
NCBI-GeneID: 6754547
NCBI-ProteinID: XP_002113696
JGI: 26233
UniProt: B3RZA6
LinkDB
AA seq 431 aa
MANSNQGPVQGQNAQQPTLYRQRFYTRPMAQSALVFDGKRMRKAVQRRTIDYNASVIRQL
ESRVWQSDYRDQPVIQPDPLYFNSLLPPSSMKQNPMNAVTTKFVRTSTNKQRCPIFCVVW
TPEGRRLITGASSGEFTLWNGLTFNFETILQAHDTSVRSMIWSHNDTWLLTTDTGGYIKY
WQSNMNNVQMFEGHKEAIREASFCPTDIKFTTCSDDGTVKIWDFLRCEEEVTLRGHGADV
KCVDWHPQKAMIASGSKDSQQPIKLWDPRIGSSISTLHLHKSTVMEVKWNKNGNWLLTAS
RDHLLKIFDIRAMKELQTFRGHKKEATAVAWHPVHEGLFASGGSDGAMYFWIAGCDKEVG
GIEQAHEGMIWSLAWHPLGHILCSGSNDHSSKFWTRNRPGDKMRDKYNMGALGSSNILDE
NDQAGKLLCPC
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggccaatagcaaccaaggcccagtacaaggtcaaaatgctcaacaaccaacattatat
cgacaacgtttttataccaggccaatggctcaaagtgctttggtctttgatggtaaaaga
atgcgaaaagccgtccaaagaagaaccattgattacaatgcatcagttattcgacaatta
gagagtcgcgtatggcaaagtgattaccgtgatcagcctgttatacagccggatccttta
tattttaatagtcttttgccaccgtctagtatgaagcagaatcctatgaacgctgtaact
acaaaatttgttagaacctcgacaaataagcaaagatgccccatcttttgtgtagtgtgg
acgccggaaggacgacgattaataactggcgcatccagtggcgaattcacattatggaat
ggactaacattcaatttcgagactattctacaagcacacgatacatctgttcgctctatg
atctggagtcataatgacacttggttgttaacaactgataccggaggctacataaagtat
tggcaatctaatatgaataatgtacaaatgtttgaaggtcataaggaagcaattagagag
gcttcgttttgtccaaccgatattaagtttaccacgtgttcagatgacggtactgtcaaa
atttgggattttcttcgatgtgaagaggaagttactcttcgagggcacggagccgatgtc
aaatgtgttgactggcatccacaaaaggctatgattgcttccggtagtaaagatagccag
caacctatcaaactatgggatcctagaattggaagtagtatctcgacgttacatctacat
aaaagcacggtcatggaagtcaaatggaataaaaacggaaactggttgttaactgcttca
agagatcatttgctaaaaatatttgatattagagcaatgaaagagttgcaaacttttaga
ggtcataaaaaagaagccacagccgttgcatggcatcctgttcatgaaggactatttgca
agcggtggttcagatggtgctatgtatttttggatagctggttgcgataaagaagttggt
ggaattgaacaagcgcatgaaggcatgatttggagtctcgcttggcatcctttgggtcat
attctttgttctggttctaacgatcattccagtaaattctggactagaaatagacctggg
gataaaatgagagataaatacaacatgggtgcactaggtagtagtaacattttagatgaa
aacgatcaagctggtaagctgttatgtccttgttga

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